RNA–Protein interactions for RNA: ENST00000479294.2

SRRM3-203, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-203ENST00000479294 MTUS2Q5JR59 1369 aa36.13■■■■□ 3.37
SRRM3-203ENST00000479294 RICTORQ6R327 1708 aa36.12■■■■□ 3.37
SRRM3-203ENST00000479294 ZMYM4Q5VZL5 1548 aa36.08■■■■□ 3.37
SRRM3-203ENST00000479294 MAGI2Q86UL8 1455 aa36.07■■■■□ 3.37
SRRM3-203ENST00000479294 VPS8Q8N3P4 1428 aa36.05■■■■□ 3.36
SRRM3-203ENST00000479294 ARHGEF40Q8TER5 1519 aa36.03■■■■□ 3.36
SRRM3-203ENST00000479294 PREX2Q70Z35 1606 aa36.02■■■■□ 3.36
SRRM3-203ENST00000479294 ARID4BQ4LE39 1312 aaPredicted RBP36.02■■■■□ 3.36
SRRM3-203ENST00000479294 GPATCH8Q9UKJ3 1502 aaKnown RBP36.01■■■■□ 3.36
SRRM3-203ENST00000479294 YEATS2Q9ULM3 1422 aa36■■■■□ 3.35
SRRM3-203ENST00000479294 ZNF518AQ6AHZ1 1483 aa36■■■■□ 3.35
SRRM3-203ENST00000479294 AFAP1Q8N556 730 aa36■■■■□ 3.35
SRRM3-203ENST00000479294 CDC42BPBQ9Y5S2 1711 aa36■■■■□ 3.35
SRRM3-203ENST00000479294 ZFYVE16Q7Z3T8 1539 aa35.99■■■■□ 3.35
SRRM3-203ENST00000479294 CCNB3Q8WWL7 1395 aa35.99■■■■□ 3.35
SRRM3-203ENST00000479294 ZNF777Q9ULD5 760 aaPredicted RBP35.96■■■■□ 3.35
SRRM3-203ENST00000479294 EHBP1L1Q8N3D4 1523 aa35.96■■■■□ 3.35
SRRM3-203ENST00000479294 CFDP1Q9UEE9 299 aaPredicted RBP35.95■■■■□ 3.35
SRRM3-203ENST00000479294 CDC42BPAQ5VT25 1732 aa35.92■■■■□ 3.34
SRRM3-203ENST00000479294 ABCC1P33527 1531 aa35.92■■■■□ 3.34
SRRM3-203ENST00000479294 ARHGEF12Q9NZN5 1544 aa35.9■■■■□ 3.34
SRRM3-203ENST00000479294 MYT1LQ9UL68 1186 aa35.89■■■■□ 3.34
SRRM3-203ENST00000479294 TRAPPC8Q9Y2L5 1435 aa35.89■■■■□ 3.34
SRRM3-203ENST00000479294 KDM5CP41229 1560 aa35.88■■■■□ 3.33
SRRM3-203ENST00000479294 ATP10AO60312 1499 aa35.86■■■■□ 3.33
SRRM3-203ENST00000479294 TIAM1Q13009 1591 aa35.85■■■■□ 3.33
SRRM3-203ENST00000479294 MLH3Q9UHC1 1453 aa35.83■■■■□ 3.33
SRRM3-203ENST00000479294 C9orf84Q5VXU9 1444 aa35.82■■■■□ 3.32
SRRM3-203ENST00000479294 HNRNPMP52272 730 aaKnown RBP eCLIP35.81■■■■□ 3.32
SRRM3-203ENST00000479294 KIAA1107Q9UPP5 1409 aa35.81■■■■□ 3.32
SRRM3-203ENST00000479294 SAMD9LQ8IVG5 1584 aa35.81■■■■□ 3.32
SRRM3-203ENST00000479294 PLEKHH2Q8IVE3 1493 aa35.8■■■■□ 3.32
SRRM3-203ENST00000479294 ADAMTSL3P82987 1691 aa35.8■■■■□ 3.32
SRRM3-203ENST00000479294 BCORL1Q5H9F3 1711 aa35.79■■■■□ 3.32
SRRM3-203ENST00000479294 NCOA2Q15596 1464 aa35.78■■■■□ 3.32
SRRM3-203ENST00000479294 HECW2Q9P2P5 1572 aa35.77■■■■□ 3.32
SRRM3-203ENST00000479294 LRRC9Q6ZRR7 1453 aa35.77■■■■□ 3.32
SRRM3-203ENST00000479294 ITSN2Q9NZM3 1697 aa35.77■■■■□ 3.32
SRRM3-203ENST00000479294 MAP3K1Q13233 1512 aa35.77■■■■□ 3.32
SRRM3-203ENST00000479294 SYCP2Q9BX26 1530 aa35.75■■■■□ 3.31
SRRM3-203ENST00000479294 PTPRMP28827 1452 aa35.73■■■■□ 3.31
SRRM3-203ENST00000479294 MLECQ14165 292 aa35.73■■■■□ 3.31
SRRM3-203ENST00000479294 KANK4Q5T7N3 995 aaPredicted RBP35.72■■■■□ 3.31
SRRM3-203ENST00000479294 ZNF644Q9H582 1327 aaPredicted RBP35.72■■■■□ 3.31
SRRM3-203ENST00000479294 SPAG9O60271 1321 aaKnown RBP35.71■■■■□ 3.31
SRRM3-203ENST00000479294 SUPT6HQ7KZ85 1726 aaKnown RBP35.71■■■■□ 3.31
SRRM3-203ENST00000479294 APLP2Q06481 763 aa35.7■■■■□ 3.31
SRRM3-203ENST00000479294 DIP2CQ9Y2E4 1556 aa35.68■■■■□ 3.3
SRRM3-203ENST00000479294 SIGLEC1Q9BZZ2 1709 aa35.68■■■■□ 3.3
SRRM3-203ENST00000479294 MADDQ8WXG6 1647 aa35.68■■■■□ 3.3
SRRM3-203ENST00000479294 REREQ9P2R6 1566 aa35.63■■■■□ 3.29
SRRM3-203ENST00000479294 ABCA6Q8N139 1617 aa35.62■■■■□ 3.29
SRRM3-203ENST00000479294 MBD5Q9P267 1494 aa35.6■■■■□ 3.29
SRRM3-203ENST00000479294 KIDINS220Q9ULH0 1771 aa35.59■■■■□ 3.29
SRRM3-203ENST00000479294 RSPH4AQ5TD94 716 aa35.55■■■■□ 3.28
SRRM3-203ENST00000479294 AGLP35573 1532 aa35.54■■■■□ 3.28
SRRM3-203ENST00000479294 CAMSAP2Q08AD1 1489 aa35.54■■■■□ 3.28
SRRM3-203ENST00000479294 ATP7AQ04656 1500 aa35.53■■■■□ 3.28
SRRM3-203ENST00000479294 RIMS1Q86UR5 1692 aaKnown RBP35.53■■■■□ 3.28
SRRM3-203ENST00000479294 PLPPR3Q6T4P5 718 aa35.49■■■■□ 3.27
SRRM3-203ENST00000479294 INO80Q9ULG1 1556 aaPredicted RBP35.48■■■■□ 3.27
SRRM3-203ENST00000479294 RTEL1-TNFRSF6BF6WH68 1400 aa35.47■■■■□ 3.27
SRRM3-203ENST00000479294 MYOM3Q5VTT5 1437 aa35.47■■■■□ 3.27
SRRM3-203ENST00000479294 CCDC141Q6ZP82 1450 aa35.47■■■■□ 3.27
SRRM3-203ENST00000479294 MIA2Q96PC5 1412 aa35.45■■■■□ 3.27
SRRM3-203ENST00000479294 A2MP01023 1474 aa35.44■■■■□ 3.26
SRRM3-203ENST00000479294 ESF1Q9H501 851 aaKnown RBP35.42■■■■□ 3.26
SRRM3-203ENST00000479294 FER1L4A9Z1Z3 1794 aa35.42■■■■□ 3.26
SRRM3-203ENST00000479294 TSPY4P0CV99 314 aa35.4■■■■□ 3.26
SRRM3-203ENST00000479294 TSPY10P0CW01 314 aa35.4■■■■□ 3.26
SRRM3-203ENST00000479294 CEBPAP49715 358 aaPredicted RBP35.36■■■■□ 3.25
SRRM3-203ENST00000479294 ARHGEF5Q12774 1597 aa35.36■■■■□ 3.25
SRRM3-203ENST00000479294 PLXNC1O60486 1568 aa35.34■■■■□ 3.25
SRRM3-203ENST00000479294 DHX29Q7Z478 1369 aaKnown RBP35.32■■■■□ 3.24
SRRM3-203ENST00000479294 CNTLNQ9NXG0 1405 aa35.31■■■■□ 3.24
SRRM3-203ENST00000479294 LMTK3Q96Q04 1460 aa35.29■■■■□ 3.24
SRRM3-203ENST00000479294 GGT6Q6P531 493 aa35.28■■■■□ 3.24
SRRM3-203ENST00000479294 ADGBQ8N7X0 1667 aa35.27■■■■□ 3.24
SRRM3-203ENST00000479294 PPP6R1Q9UPN7 881 aa35.24■■■■□ 3.23
SRRM3-203ENST00000479294 FGD6Q6ZV73 1430 aa35.22■■■■□ 3.23
SRRM3-203ENST00000479294 KIF3BO15066 747 aa35.19■■■■□ 3.22
SRRM3-203ENST00000479294 ZMYM3Q14202 1370 aa35.17■■■■□ 3.22
SRRM3-203ENST00000479294 MAST1Q9Y2H9 1570 aa35.17■■■■□ 3.22
SRRM3-203ENST00000479294 HSPA2P54652 639 aa35.16■■■■□ 3.22
SRRM3-203ENST00000479294 PTPN23Q9H3S7 1636 aa35.16■■■■□ 3.22
SRRM3-203ENST00000479294 TCOF1Q13428 1488 aaKnown RBP35.15■■■■□ 3.22
SRRM3-203ENST00000479294 ABCC5O15440 1437 aa35.13■■■■□ 3.21
SRRM3-203ENST00000479294 C3P01024 1663 aa35.11■■■■□ 3.21
SRRM3-203ENST00000479294 UHRF1BP1Q6BDS2 1440 aa35.09■■■■□ 3.21
SRRM3-203ENST00000479294 SHANK2Q9UPX8 1470 aa35.07■■■■□ 3.2
SRRM3-203ENST00000479294 DAPK1P53355 1430 aa35.06■■■■□ 3.2
SRRM3-203ENST00000479294 MROH2AA6NES4 1674 aa35.06■■■■□ 3.2
SRRM3-203ENST00000479294 NPATQ14207 1427 aa35.06■■■■□ 3.2
SRRM3-203ENST00000479294 PREX1Q8TCU6 1659 aa35.04■■■■□ 3.2
SRRM3-203ENST00000479294 CLTCQ00610 1675 aaKnown RBP35.02■■■■□ 3.2
SRRM3-203ENST00000479294 FAM50AQ14320 339 aaKnown RBP35.02■■■■□ 3.2
SRRM3-203ENST00000479294 WASHC2CQ9Y4E1 1318 aa35.02■■■■□ 3.2
SRRM3-203ENST00000479294 KIF15Q9NS87 1388 aa35■■■■□ 3.19
SRRM3-203ENST00000479294 SETD1BQ9UPS6 1966 aaKnown RBP35■■■■□ 3.19
SRRM3-203ENST00000479294 RRP7BPQ9NSQ0 103 aa35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms