RNA–Protein interactions for RNA: ENST00000479210.1

GLI3-206, Transcript of GLI family zinc finger 3, humanhuman

TSL 2

Gene GLI3, Length 4,968 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-206ENST00000479210 KTN1Q86UP2 1357 aaKnown RBP18.41■□□□□ 0.54
GLI3-206ENST00000479210 NUP155O75694 1391 aa18.39■□□□□ 0.54
GLI3-206ENST00000479210 STK26Q9P289 416 aa18.39■□□□□ 0.54
GLI3-206ENST00000479210 DNTTIP2Q5QJE6 756 aaKnown RBP18.39■□□□□ 0.53
GLI3-206ENST00000479210 HDGFP51858 240 aaKnown RBP18.38■□□□□ 0.53
GLI3-206ENST00000479210 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
GLI3-206ENST00000479210 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
GLI3-206ENST00000479210 KCNJ4P48050 445 aa18.37■□□□□ 0.53
GLI3-206ENST00000479210 FGD1P98174 961 aa18.37■□□□□ 0.53
GLI3-206ENST00000479210 CARMIL2Q6F5E8 1435 aa18.36■□□□□ 0.53
GLI3-206ENST00000479210 PLCB2Q00722 1185 aa18.36■□□□□ 0.53
GLI3-206ENST00000479210 RTN4Q9NQC3 1192 aaKnown RBP18.35■□□□□ 0.53
GLI3-206ENST00000479210 TAOK2Q9UL54 1235 aa18.35■□□□□ 0.53
GLI3-206ENST00000479210 ROCK2O75116 1388 aaKnown RBP18.35■□□□□ 0.53
GLI3-206ENST00000479210 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
GLI3-206ENST00000479210 HSCBQ8IWL3 235 aa18.33■□□□□ 0.53
GLI3-206ENST00000479210 L3MBTL2Q969R5 705 aa18.33■□□□□ 0.53
GLI3-206ENST00000479210 RALBP1Q15311 655 aa18.33■□□□□ 0.53
GLI3-206ENST00000479210 EFCAB2Q5VUJ9 269 aa18.33■□□□□ 0.53
GLI3-206ENST00000479210 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
GLI3-206ENST00000479210 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
GLI3-206ENST00000479210 ANKRD30AQ9BXX3 1397 aa18.32■□□□□ 0.52
GLI3-206ENST00000479210 HDGFL2Q7Z4V5 671 aaPredicted RBP18.31■□□□□ 0.52
GLI3-206ENST00000479210 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
GLI3-206ENST00000479210 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
GLI3-206ENST00000479210 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
GLI3-206ENST00000479210 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
GLI3-206ENST00000479210 NAP1L2Q9ULW6 460 aaPredicted RBP18.29■□□□□ 0.52
GLI3-206ENST00000479210 IPO8O15397 1037 aaKnown RBP18.28■□□□□ 0.52
GLI3-206ENST00000479210 NAP1L5Q96NT1 182 aaPredicted RBP18.28■□□□□ 0.52
GLI3-206ENST00000479210 APBB1O00213 710 aa18.27■□□□□ 0.51
GLI3-206ENST00000479210 NPHP1O15259 732 aa18.27■□□□□ 0.51
GLI3-206ENST00000479210 HNRNPMP52272 730 aaKnown RBP eCLIP18.25■□□□□ 0.51
GLI3-206ENST00000479210 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
GLI3-206ENST00000479210 KIF3BO15066 747 aa18.25■□□□□ 0.51
GLI3-206ENST00000479210 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
GLI3-206ENST00000479210 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
GLI3-206ENST00000479210 MCCP23508 829 aa18.23■□□□□ 0.51
GLI3-206ENST00000479210 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
GLI3-206ENST00000479210 ITPRIPQ8IWB1 547 aa18.21■□□□□ 0.51
GLI3-206ENST00000479210 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
GLI3-206ENST00000479210 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
GLI3-206ENST00000479210 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
GLI3-206ENST00000479210 DEKP35659 375 aaKnown RBP18.2■□□□□ 0.5
GLI3-206ENST00000479210 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
GLI3-206ENST00000479210 TULP1O00294 542 aaPredicted RBP18.19■□□□□ 0.5
GLI3-206ENST00000479210 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
GLI3-206ENST00000479210 WIZO95785 1651 aa18.19■□□□□ 0.5
GLI3-206ENST00000479210 CFAP44Q96MT7 982 aa18.19■□□□□ 0.5
GLI3-206ENST00000479210 TSHZ2Q9NRE2 1034 aa18.18■□□□□ 0.5
GLI3-206ENST00000479210 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
GLI3-206ENST00000479210 PAK3O75914 559 aaPredicted RBP18.18■□□□□ 0.5
GLI3-206ENST00000479210 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
GLI3-206ENST00000479210 RSPH4AQ5TD94 716 aa18.16■□□□□ 0.5
GLI3-206ENST00000479210 EIF3AQ14152 1382 aaKnown RBP18.15■□□□□ 0.5
GLI3-206ENST00000479210 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
GLI3-206ENST00000479210 L1TD1Q5T7N2 865 aaKnown RBP18.15■□□□□ 0.5
GLI3-206ENST00000479210 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
GLI3-206ENST00000479210 SPAG9O60271 1321 aaKnown RBP18.15■□□□□ 0.5
GLI3-206ENST00000479210 CLUAP1Q96AJ1 413 aa18.14■□□□□ 0.5
GLI3-206ENST00000479210 GOLGA6L6A8MZA4 724 aa18.14■□□□□ 0.49
GLI3-206ENST00000479210 NRDCO43847 1150 aa18.14■□□□□ 0.49
GLI3-206ENST00000479210 SMC4Q9NTJ3 1288 aa18.14■□□□□ 0.49
GLI3-206ENST00000479210 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
GLI3-206ENST00000479210 NUTM2DQ5VT03 806 aaPredicted RBP18.13■□□□□ 0.49
GLI3-206ENST00000479210 KIAA1211Q6ZU35 1233 aa18.13■□□□□ 0.49
GLI3-206ENST00000479210 JPH4Q96JJ6 628 aa18.13■□□□□ 0.49
GLI3-206ENST00000479210 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
GLI3-206ENST00000479210 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
GLI3-206ENST00000479210 PDE3BQ13370 1112 aa18.12■□□□□ 0.49
GLI3-206ENST00000479210 CCDC18Q5T9S5 1454 aa18.12■□□□□ 0.49
GLI3-206ENST00000479210 PMFBP1Q8TBY8 1022 aa18.11■□□□□ 0.49
GLI3-206ENST00000479210 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
GLI3-206ENST00000479210 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
GLI3-206ENST00000479210 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.49
GLI3-206ENST00000479210 MSNP26038 577 aaKnown RBP18.08■□□□□ 0.48
GLI3-206ENST00000479210 GBP4Q96PP9 640 aa18.08■□□□□ 0.48
GLI3-206ENST00000479210 CENPJQ9HC77 1338 aaPredicted RBP18.08■□□□□ 0.48
GLI3-206ENST00000479210 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
GLI3-206ENST00000479210 CSB-PGBD3P0DP91 1061 aa18.07■□□□□ 0.48
GLI3-206ENST00000479210 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
GLI3-206ENST00000479210 MFAP1P55081 439 aaKnown RBP18.07■□□□□ 0.48
GLI3-206ENST00000479210 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
GLI3-206ENST00000479210 PANK3Q9H999 370 aa18.05■□□□□ 0.48
GLI3-206ENST00000479210 IPO9Q96P70 1041 aaKnown RBP18.04■□□□□ 0.48
GLI3-206ENST00000479210 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
GLI3-206ENST00000479210 MYBBP1AQ9BQG0 1328 aaKnown RBP18.04■□□□□ 0.48
GLI3-206ENST00000479210 CHAF1AQ13111 956 aaPredicted RBP18.03■□□□□ 0.48
GLI3-206ENST00000479210 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
GLI3-206ENST00000479210 DRC7Q8IY82 874 aa18.03■□□□□ 0.48
GLI3-206ENST00000479210 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
GLI3-206ENST00000479210 PHLDB1Q86UU1 1377 aa18.03■□□□□ 0.48
GLI3-206ENST00000479210 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
GLI3-206ENST00000479210 SLC4A10Q6U841 1118 aa18.02■□□□□ 0.48
GLI3-206ENST00000479210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.48
GLI3-206ENST00000479210 RRP7AQ9Y3A4 280 aaKnown RBP18.02■□□□□ 0.48
GLI3-206ENST00000479210 CCDC144AA2RUR9 1427 aa18.01■□□□□ 0.47
GLI3-206ENST00000479210 HMMRO75330 724 aa18.01■□□□□ 0.47
GLI3-206ENST00000479210 NGDNQ8NEJ9 315 aaKnown RBP18.01■□□□□ 0.47
GLI3-206ENST00000479210 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms