RNA–Protein interactions for RNA: ENST00000479042.1

LSP1P2-201, Transcript of LSP1 pseudogene 2, humanhuman

BASIC

Gene LSP1P2, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P2-201ENST00000479042 PHLDB1Q86UU1 1377 aa18.39■□□□□ 0.53
LSP1P2-201ENST00000479042 VPS8Q8N3P4 1428 aa18.36■□□□□ 0.53
LSP1P2-201ENST00000479042 SCAPERQ9BY12 1400 aa18.36■□□□□ 0.53
LSP1P2-201ENST00000479042 MTUS2Q5JR59 1369 aa18.35■□□□□ 0.53
LSP1P2-201ENST00000479042 ARHGEF40Q8TER5 1519 aa18.34■□□□□ 0.53
LSP1P2-201ENST00000479042 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.53
LSP1P2-201ENST00000479042 POGZQ7Z3K3 1410 aa18.33■□□□□ 0.53
LSP1P2-201ENST00000479042 TIAM1Q13009 1591 aa18.33■□□□□ 0.52
LSP1P2-201ENST00000479042 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
LSP1P2-201ENST00000479042 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
LSP1P2-201ENST00000479042 ZMYM4Q5VZL5 1548 aa18.32■□□□□ 0.52
LSP1P2-201ENST00000479042 SIGLEC1Q9BZZ2 1709 aa18.31■□□□□ 0.52
LSP1P2-201ENST00000479042 ABCC1P33527 1531 aa18.3■□□□□ 0.52
LSP1P2-201ENST00000479042 ITSN2Q9NZM3 1697 aa18.3■□□□□ 0.52
LSP1P2-201ENST00000479042 SAMD9LQ8IVG5 1584 aa18.3■□□□□ 0.52
LSP1P2-201ENST00000479042 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
LSP1P2-201ENST00000479042 ARHGEF12Q9NZN5 1544 aa18.29■□□□□ 0.52
LSP1P2-201ENST00000479042 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
LSP1P2-201ENST00000479042 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
LSP1P2-201ENST00000479042 SYCP2Q9BX26 1530 aa18.26■□□□□ 0.51
LSP1P2-201ENST00000479042 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
LSP1P2-201ENST00000479042 TRAPPC8Q9Y2L5 1435 aa18.25■□□□□ 0.51
LSP1P2-201ENST00000479042 AFAP1Q8N556 730 aa18.25■□□□□ 0.51
LSP1P2-201ENST00000479042 KDM5CP41229 1560 aa18.25■□□□□ 0.51
LSP1P2-201ENST00000479042 SUPT6HQ7KZ85 1726 aaKnown RBP18.24■□□□□ 0.51
LSP1P2-201ENST00000479042 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
LSP1P2-201ENST00000479042 HECW2Q9P2P5 1572 aa18.23■□□□□ 0.51
LSP1P2-201ENST00000479042 NCOA2Q15596 1464 aa18.23■□□□□ 0.51
LSP1P2-201ENST00000479042 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
LSP1P2-201ENST00000479042 BCORL1Q5H9F3 1711 aa18.22■□□□□ 0.51
LSP1P2-201ENST00000479042 LRRC9Q6ZRR7 1453 aa18.21■□□□□ 0.51
LSP1P2-201ENST00000479042 ABCA6Q8N139 1617 aa18.21■□□□□ 0.51
LSP1P2-201ENST00000479042 MADDQ8WXG6 1647 aa18.2■□□□□ 0.5
LSP1P2-201ENST00000479042 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
LSP1P2-201ENST00000479042 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
LSP1P2-201ENST00000479042 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
LSP1P2-201ENST00000479042 ADAMTSL3P82987 1691 aa18.19■□□□□ 0.5
LSP1P2-201ENST00000479042 DIP2CQ9Y2E4 1556 aa18.19■□□□□ 0.5
LSP1P2-201ENST00000479042 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
LSP1P2-201ENST00000479042 ZNF644Q9H582 1327 aaPredicted RBP18.19■□□□□ 0.5
LSP1P2-201ENST00000479042 HNRNPMP52272 730 aaKnown RBP eCLIP18.17■□□□□ 0.5
LSP1P2-201ENST00000479042 MLECQ14165 292 aa18.16■□□□□ 0.5
LSP1P2-201ENST00000479042 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
LSP1P2-201ENST00000479042 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
LSP1P2-201ENST00000479042 C9orf84Q5VXU9 1444 aa18.15■□□□□ 0.5
LSP1P2-201ENST00000479042 ATP10AO60312 1499 aa18.14■□□□□ 0.49
LSP1P2-201ENST00000479042 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
LSP1P2-201ENST00000479042 CAMSAP2Q08AD1 1489 aa18.13■□□□□ 0.49
LSP1P2-201ENST00000479042 MLH3Q9UHC1 1453 aa18.13■□□□□ 0.49
LSP1P2-201ENST00000479042 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
LSP1P2-201ENST00000479042 INO80Q9ULG1 1556 aaPredicted RBP18.11■□□□□ 0.49
LSP1P2-201ENST00000479042 FER1L4A9Z1Z3 1794 aa18.1■□□□□ 0.49
LSP1P2-201ENST00000479042 ATP7AQ04656 1500 aa18.1■□□□□ 0.49
LSP1P2-201ENST00000479042 PLEKHH2Q8IVE3 1493 aa18.1■□□□□ 0.49
LSP1P2-201ENST00000479042 PTPRMP28827 1452 aa18.09■□□□□ 0.49
LSP1P2-201ENST00000479042 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
LSP1P2-201ENST00000479042 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
LSP1P2-201ENST00000479042 SPAG9O60271 1321 aaKnown RBP18.07■□□□□ 0.48
LSP1P2-201ENST00000479042 APLP2Q06481 763 aa18.07■□□□□ 0.48
LSP1P2-201ENST00000479042 REREQ9P2R6 1566 aa18.05■□□□□ 0.48
LSP1P2-201ENST00000479042 MYOM3Q5VTT5 1437 aa18.04■□□□□ 0.48
LSP1P2-201ENST00000479042 CCDC141Q6ZP82 1450 aa18.02■□□□□ 0.48
LSP1P2-201ENST00000479042 ADGBQ8N7X0 1667 aa18.02■□□□□ 0.47
LSP1P2-201ENST00000479042 PLXNC1O60486 1568 aa18■□□□□ 0.47
LSP1P2-201ENST00000479042 ARHGEF5Q12774 1597 aa17.99■□□□□ 0.47
LSP1P2-201ENST00000479042 AGLP35573 1532 aa17.98■□□□□ 0.47
LSP1P2-201ENST00000479042 A2MP01023 1474 aa17.98■□□□□ 0.47
LSP1P2-201ENST00000479042 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
LSP1P2-201ENST00000479042 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.47
LSP1P2-201ENST00000479042 CEBPAP49715 358 aaPredicted RBP17.95■□□□□ 0.46
LSP1P2-201ENST00000479042 MIA2Q96PC5 1412 aa17.95■□□□□ 0.46
LSP1P2-201ENST00000479042 CROCC2H7BZ55 1655 aa17.93■□□□□ 0.46
LSP1P2-201ENST00000479042 FGD6Q6ZV73 1430 aa17.93■□□□□ 0.46
LSP1P2-201ENST00000479042 LMTK3Q96Q04 1460 aa17.93■□□□□ 0.46
LSP1P2-201ENST00000479042 C3P01024 1663 aa17.93■□□□□ 0.46
LSP1P2-201ENST00000479042 RTEL1-TNFRSF6BF6WH68 1400 aa17.92■□□□□ 0.46
LSP1P2-201ENST00000479042 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
LSP1P2-201ENST00000479042 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
LSP1P2-201ENST00000479042 MAST1Q9Y2H9 1570 aa17.9■□□□□ 0.46
LSP1P2-201ENST00000479042 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
LSP1P2-201ENST00000479042 GGT6Q6P531 493 aa17.88■□□□□ 0.45
LSP1P2-201ENST00000479042 DNMT1P26358 1616 aaKnown RBP17.87■□□□□ 0.45
LSP1P2-201ENST00000479042 ABCC5O15440 1437 aa17.87■□□□□ 0.45
LSP1P2-201ENST00000479042 TSPY4P0CV99 314 aa17.86■□□□□ 0.45
LSP1P2-201ENST00000479042 TSPY10P0CW01 314 aa17.86■□□□□ 0.45
LSP1P2-201ENST00000479042 DHX29Q7Z478 1369 aaKnown RBP17.86■□□□□ 0.45
LSP1P2-201ENST00000479042 DAPK1P53355 1430 aa17.86■□□□□ 0.45
LSP1P2-201ENST00000479042 HSPA2P54652 639 aa17.85■□□□□ 0.45
LSP1P2-201ENST00000479042 ESF1Q9H501 851 aaKnown RBP17.85■□□□□ 0.45
LSP1P2-201ENST00000479042 RSPH4AQ5TD94 716 aa17.84■□□□□ 0.45
LSP1P2-201ENST00000479042 MROH2AA6NES4 1674 aa17.83■□□□□ 0.45
LSP1P2-201ENST00000479042 PREX1Q8TCU6 1659 aa17.83■□□□□ 0.45
LSP1P2-201ENST00000479042 KIF3BO15066 747 aa17.83■□□□□ 0.44
LSP1P2-201ENST00000479042 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
LSP1P2-201ENST00000479042 SHANK2Q9UPX8 1470 aa17.82■□□□□ 0.44
LSP1P2-201ENST00000479042 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
LSP1P2-201ENST00000479042 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
LSP1P2-201ENST00000479042 RRP7BPQ9NSQ0 103 aa17.78■□□□□ 0.44
LSP1P2-201ENST00000479042 RNF17Q9BXT8 1623 aaKnown RBP17.78■□□□□ 0.44
LSP1P2-201ENST00000479042 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms