RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 CCDC18Q5T9S5 1454 aa26.97■■□□□ 1.91
PHF1-207ENST00000479029 YEATS2Q9ULM3 1422 aa26.96■■□□□ 1.91
PHF1-207ENST00000479029 ZFYVE16Q7Z3T8 1539 aa26.95■■□□□ 1.91
PHF1-207ENST00000479029 MYO5CQ9NQX4 1742 aa26.95■■□□□ 1.9
PHF1-207ENST00000479029 BCORL1Q5H9F3 1711 aa26.94■■□□□ 1.9
PHF1-207ENST00000479029 PCF11O94913 1555 aaKnown RBP26.92■■□□□ 1.9
PHF1-207ENST00000479029 ARHGAP5Q13017 1502 aa26.92■■□□□ 1.9
PHF1-207ENST00000479029 LRRIQ1Q96JM4 1722 aa26.92■■□□□ 1.9
PHF1-207ENST00000479029 FYCO1Q9BQS8 1478 aa26.89■■□□□ 1.9
PHF1-207ENST00000479029 MADDQ8WXG6 1647 aa26.88■■□□□ 1.89
PHF1-207ENST00000479029 AFAP1Q8N556 730 aa26.87■■□□□ 1.89
PHF1-207ENST00000479029 ZNF518AQ6AHZ1 1483 aa26.86■■□□□ 1.89
PHF1-207ENST00000479029 MLECQ14165 292 aa26.85■■□□□ 1.89
PHF1-207ENST00000479029 ATP10AO60312 1499 aa26.85■■□□□ 1.89
PHF1-207ENST00000479029 MYT1LQ9UL68 1186 aa26.84■■□□□ 1.89
PHF1-207ENST00000479029 C9orf84Q5VXU9 1444 aa26.8■■□□□ 1.88
PHF1-207ENST00000479029 PLPPR3Q6T4P5 718 aa26.78■■□□□ 1.88
PHF1-207ENST00000479029 CDC42BPBQ9Y5S2 1711 aa26.77■■□□□ 1.88
PHF1-207ENST00000479029 RIMS1Q86UR5 1692 aaKnown RBP26.77■■□□□ 1.88
PHF1-207ENST00000479029 SIGLEC1Q9BZZ2 1709 aa26.76■■□□□ 1.87
PHF1-207ENST00000479029 KDM5CP41229 1560 aa26.75■■□□□ 1.87
PHF1-207ENST00000479029 PREX2Q70Z35 1606 aa26.75■■□□□ 1.87
PHF1-207ENST00000479029 ILDR1Q86SU0 546 aaPredicted RBP26.73■■□□□ 1.87
PHF1-207ENST00000479029 ZNF777Q9ULD5 760 aaPredicted RBP26.73■■□□□ 1.87
PHF1-207ENST00000479029 TRAPPC8Q9Y2L5 1435 aa26.72■■□□□ 1.87
PHF1-207ENST00000479029 ARHGEF12Q9NZN5 1544 aa26.71■■□□□ 1.87
PHF1-207ENST00000479029 MLH3Q9UHC1 1453 aa26.71■■□□□ 1.87
PHF1-207ENST00000479029 ABCC1P33527 1531 aa26.7■■□□□ 1.86
PHF1-207ENST00000479029 MTUS2Q5JR59 1369 aa26.69■■□□□ 1.86
PHF1-207ENST00000479029 LMTK3Q96Q04 1460 aa26.68■■□□□ 1.86
PHF1-207ENST00000479029 GPATCH8Q9UKJ3 1502 aaKnown RBP26.68■■□□□ 1.86
PHF1-207ENST00000479029 CEP162Q5TB80 1403 aa26.67■■□□□ 1.86
PHF1-207ENST00000479029 CFDP1Q9UEE9 299 aaPredicted RBP26.67■■□□□ 1.86
PHF1-207ENST00000479029 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
PHF1-207ENST00000479029 CCNB3Q8WWL7 1395 aa26.65■■□□□ 1.86
PHF1-207ENST00000479029 DIP2CQ9Y2E4 1556 aa26.64■■□□□ 1.86
PHF1-207ENST00000479029 FER1L4A9Z1Z3 1794 aa26.63■■□□□ 1.85
PHF1-207ENST00000479029 HNRNPMP52272 730 aaKnown RBP eCLIP26.62■■□□□ 1.85
PHF1-207ENST00000479029 ITSN2Q9NZM3 1697 aa26.62■■□□□ 1.85
PHF1-207ENST00000479029 HSPA2P54652 639 aa26.61■■□□□ 1.85
PHF1-207ENST00000479029 REREQ9P2R6 1566 aa26.6■■□□□ 1.85
PHF1-207ENST00000479029 CEBPAP49715 358 aaPredicted RBP26.6■■□□□ 1.85
PHF1-207ENST00000479029 SPAG9O60271 1321 aaKnown RBP26.59■■□□□ 1.85
PHF1-207ENST00000479029 ABCA6Q8N139 1617 aa26.58■■□□□ 1.85
PHF1-207ENST00000479029 ESF1Q9H501 851 aaKnown RBP26.58■■□□□ 1.85
PHF1-207ENST00000479029 SAMD9LQ8IVG5 1584 aa26.58■■□□□ 1.85
PHF1-207ENST00000479029 KIAA1107Q9UPP5 1409 aa26.57■■□□□ 1.84
PHF1-207ENST00000479029 PLEKHH2Q8IVE3 1493 aa26.57■■□□□ 1.84
PHF1-207ENST00000479029 AGLP35573 1532 aa26.55■■□□□ 1.84
PHF1-207ENST00000479029 SYCP2Q9BX26 1530 aa26.55■■□□□ 1.84
PHF1-207ENST00000479029 LOC105371045A0A1W2PR82 267 aa26.54■■□□□ 1.84
PHF1-207ENST00000479029 KIDINS220Q9ULH0 1771 aa26.53■■□□□ 1.84
PHF1-207ENST00000479029 EHBP1L1Q8N3D4 1523 aa26.51■■□□□ 1.83
PHF1-207ENST00000479029 ZNF644Q9H582 1327 aaPredicted RBP26.48■■□□□ 1.83
PHF1-207ENST00000479029 TIAM1Q13009 1591 aa26.44■■□□□ 1.82
PHF1-207ENST00000479029 ATP7AQ04656 1500 aa26.44■■□□□ 1.82
PHF1-207ENST00000479029 CNTLNQ9NXG0 1405 aa26.43■■□□□ 1.82
PHF1-207ENST00000479029 FBXO41Q8TF61 875 aa26.42■■□□□ 1.82
PHF1-207ENST00000479029 SETD1BQ9UPS6 1966 aaKnown RBP26.42■■□□□ 1.82
PHF1-207ENST00000479029 UHRF1BP1Q6BDS2 1440 aa26.41■■□□□ 1.82
PHF1-207ENST00000479029 PREX1Q8TCU6 1659 aa26.41■■□□□ 1.82
PHF1-207ENST00000479029 A2MP01023 1474 aa26.39■■□□□ 1.82
PHF1-207ENST00000479029 NCOA2Q15596 1464 aa26.39■■□□□ 1.82
PHF1-207ENST00000479029 MBD5Q9P267 1494 aa26.39■■□□□ 1.82
PHF1-207ENST00000479029 VPS8Q8N3P4 1428 aa26.39■■□□□ 1.81
PHF1-207ENST00000479029 INO80Q9ULG1 1556 aaPredicted RBP26.37■■□□□ 1.81
PHF1-207ENST00000479029 C3P01024 1663 aa26.35■■□□□ 1.81
PHF1-207ENST00000479029 RSPH4AQ5TD94 716 aa26.35■■□□□ 1.81
PHF1-207ENST00000479029 GGT6Q6P531 493 aa26.35■■□□□ 1.81
PHF1-207ENST00000479029 DMRT2Q9Y5R5 561 aa26.35■■□□□ 1.81
PHF1-207ENST00000479029 SUPT6HQ7KZ85 1726 aaKnown RBP26.34■■□□□ 1.81
PHF1-207ENST00000479029 ZMYM3Q14202 1370 aa26.33■■□□□ 1.81
PHF1-207ENST00000479029 RTEL1-TNFRSF6BF6WH68 1400 aa26.33■■□□□ 1.81
PHF1-207ENST00000479029 PPP6R1Q9UPN7 881 aa26.32■■□□□ 1.8
PHF1-207ENST00000479029 PLXNC1O60486 1568 aa26.32■■□□□ 1.8
PHF1-207ENST00000479029 LRRC9Q6ZRR7 1453 aa26.3■■□□□ 1.8
PHF1-207ENST00000479029 NPATQ14207 1427 aa26.28■■□□□ 1.8
PHF1-207ENST00000479029 CAMSAP2Q08AD1 1489 aa26.28■■□□□ 1.8
PHF1-207ENST00000479029 CCDC141Q6ZP82 1450 aa26.28■■□□□ 1.8
PHF1-207ENST00000479029 DHX29Q7Z478 1369 aaKnown RBP26.27■■□□□ 1.8
PHF1-207ENST00000479029 ADGBQ8N7X0 1667 aa26.26■■□□□ 1.79
PHF1-207ENST00000479029 TSPY4P0CV99 314 aa26.25■■□□□ 1.79
PHF1-207ENST00000479029 TSPY10P0CW01 314 aa26.25■■□□□ 1.79
PHF1-207ENST00000479029 KANK4Q5T7N3 995 aaPredicted RBP26.25■■□□□ 1.79
PHF1-207ENST00000479029 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
PHF1-207ENST00000479029 MROH2AA6NES4 1674 aa26.25■■□□□ 1.79
PHF1-207ENST00000479029 MAP3K1Q13233 1512 aa26.23■■□□□ 1.79
PHF1-207ENST00000479029 KIF3BO15066 747 aa26.21■■□□□ 1.79
PHF1-207ENST00000479029 STRCQ7RTU9 1775 aa26.2■■□□□ 1.78
PHF1-207ENST00000479029 CLTCQ00610 1675 aaKnown RBP26.19■■□□□ 1.78
PHF1-207ENST00000479029 APLP2Q06481 763 aa26.18■■□□□ 1.78
PHF1-207ENST00000479029 PTPRKQ15262 1439 aa26.17■■□□□ 1.78
PHF1-207ENST00000479029 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
PHF1-207ENST00000479029 PTPRTO14522 1441 aa26.16■■□□□ 1.78
PHF1-207ENST00000479029 NCOA1Q15788 1441 aa26.14■■□□□ 1.77
PHF1-207ENST00000479029 MYOM3Q5VTT5 1437 aa26.13■■□□□ 1.77
PHF1-207ENST00000479029 MIA2Q96PC5 1412 aa26.13■■□□□ 1.77
PHF1-207ENST00000479029 WASHC2CQ9Y4E1 1318 aa26.12■■□□□ 1.77
PHF1-207ENST00000479029 CAMSAP1Q5T5Y3 1602 aa26.08■■□□□ 1.77
PHF1-207ENST00000479029 NCKAP5LQ9HCH0 1330 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms