RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 BOLA1Q9Y3E2 137 aa4.86□□□□□ -1.63
PDE1C-208ENST00000478736 TMEM121BQ9BXQ6 578 aaPredicted RBP4.85□□□□□ -1.63
PDE1C-208ENST00000478736 SPRYD3Q8NCJ5 442 aa4.84□□□□□ -1.63
PDE1C-208ENST00000478736 SLAIN1Q8ND83 568 aa4.84□□□□□ -1.63
PDE1C-208ENST00000478736 TSHZ2Q9NRE2 1034 aa4.84□□□□□ -1.63
PDE1C-208ENST00000478736 MARVELD3Q96A59 401 aa4.83□□□□□ -1.64
PDE1C-208ENST00000478736 NCKAP5LQ9HCH0 1330 aa4.81□□□□□ -1.64
PDE1C-208ENST00000478736 L3MBTL3Q96JM7 780 aaPredicted RBP4.81□□□□□ -1.64
PDE1C-208ENST00000478736 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.81□□□□□ -1.64
PDE1C-208ENST00000478736 C2orf72A6NCS6 295 aa4.8□□□□□ -1.64
PDE1C-208ENST00000478736 PLCB2Q00722 1185 aa4.8□□□□□ -1.64
PDE1C-208ENST00000478736 KRTAP3-3Q9BYR6 98 aa4.8□□□□□ -1.64
PDE1C-208ENST00000478736 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
PDE1C-208ENST00000478736 KIF3CO14782 793 aa4.79□□□□□ -1.64
PDE1C-208ENST00000478736 C3orf67Q6ZVT6 689 aa4.78□□□□□ -1.64
PDE1C-208ENST00000478736 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.78□□□□□ -1.64
PDE1C-208ENST00000478736 DSG2Q14126 1118 aa4.77□□□□□ -1.65
PDE1C-208ENST00000478736 KDM2AQ9Y2K7 1162 aa4.77□□□□□ -1.65
PDE1C-208ENST00000478736 G3V3G9 751 aa4.76□□□□□ -1.65
PDE1C-208ENST00000478736 HOXB3P14651 431 aaPredicted RBP4.76□□□□□ -1.65
PDE1C-208ENST00000478736 KHSRPQ92945 711 aaKnown RBP eCLIP4.76□□□□□ -1.65
PDE1C-208ENST00000478736 CRISPLD2Q9H0B8 497 aa4.76□□□□□ -1.65
PDE1C-208ENST00000478736 HAP1P54257 671 aaPredicted RBP4.75□□□□□ -1.65
PDE1C-208ENST00000478736 LARP6Q9BRS8 491 aaKnown RBP4.75□□□□□ -1.65
PDE1C-208ENST00000478736 GPHNQ9NQX3 736 aaPredicted RBP4.74□□□□□ -1.65
PDE1C-208ENST00000478736 POTEB3A0JP26 581 aa4.73□□□□□ -1.65
PDE1C-208ENST00000478736 POTEBQ6S5H4 581 aa4.73□□□□□ -1.65
PDE1C-208ENST00000478736 PLPP6Q8IY26 295 aa4.73□□□□□ -1.65
PDE1C-208ENST00000478736 RNF166Q96A37 237 aaPredicted RBP4.73□□□□□ -1.65
PDE1C-208ENST00000478736 RYDENQ9NUL5 291 aaKnown RBP4.72□□□□□ -1.65
PDE1C-208ENST00000478736 SNPHO15079 494 aa4.71□□□□□ -1.66
PDE1C-208ENST00000478736 EMP3P54852 163 aa4.71□□□□□ -1.66
PDE1C-208ENST00000478736 FOXK1P85037 733 aa4.71□□□□□ -1.66
PDE1C-208ENST00000478736 TMC2Q8TDI7 906 aa4.71□□□□□ -1.66
PDE1C-208ENST00000478736 HS3ST6Q96QI5 342 aa4.71□□□□□ -1.66
PDE1C-208ENST00000478736 EMILIN3Q9NT22 766 aa4.71□□□□□ -1.66
PDE1C-208ENST00000478736 PDE4AP27815 886 aa4.7□□□□□ -1.66
PDE1C-208ENST00000478736 MFSD10Q14728 455 aa4.7□□□□□ -1.66
PDE1C-208ENST00000478736 ARSIQ5FYB1 569 aa4.7□□□□□ -1.66
PDE1C-208ENST00000478736 PPP1R15BQ5SWA1 713 aa4.7□□□□□ -1.66
PDE1C-208ENST00000478736 UPF1Q92900 1129 aaKnown RBP eCLIP4.7□□□□□ -1.66
PDE1C-208ENST00000478736 SLC24A1O60721 1099 aa4.69□□□□□ -1.66
PDE1C-208ENST00000478736 GPR153Q6NV75 609 aa4.69□□□□□ -1.66
PDE1C-208ENST00000478736 DDX27Q96GQ7 796 aaKnown RBP4.69□□□□□ -1.66
PDE1C-208ENST00000478736 FAM205CA6NFA0 338 aa4.68□□□□□ -1.66
PDE1C-208ENST00000478736 KDM4FA0A1W2PPD8 638 aa4.66□□□□□ -1.66
PDE1C-208ENST00000478736 NUDT7P0C024 238 aa4.66□□□□□ -1.66
PDE1C-208ENST00000478736 PCDHGA4Q9Y5G9 962 aa4.66□□□□□ -1.66
PDE1C-208ENST00000478736 DPYSL4O14531 572 aa4.65□□□□□ -1.67
PDE1C-208ENST00000478736 CAMK2BQ13554 666 aa4.65□□□□□ -1.67
PDE1C-208ENST00000478736 KCNV2Q8TDN2 545 aa4.65□□□□□ -1.67
PDE1C-208ENST00000478736 OXER1Q8TDS5 423 aa4.65□□□□□ -1.67
PDE1C-208ENST00000478736 PTCD2Q8WV60 388 aaKnown RBP4.65□□□□□ -1.67
PDE1C-208ENST00000478736 SLC34A2O95436 690 aa4.63□□□□□ -1.67
PDE1C-208ENST00000478736 HOXB1P14653 301 aaPredicted RBP4.63□□□□□ -1.67
PDE1C-208ENST00000478736 E2F4Q16254 413 aa4.63□□□□□ -1.67
PDE1C-208ENST00000478736 DOK7Q18PE1 504 aa4.63□□□□□ -1.67
PDE1C-208ENST00000478736 ZNF710Q8N1W2 664 aa4.63□□□□□ -1.67
PDE1C-208ENST00000478736 MYT1LQ9UL68 1186 aa4.63□□□□□ -1.67
PDE1C-208ENST00000478736 WDR70Q9NW82 654 aa4.62□□□□□ -1.67
PDE1C-208ENST00000478736 LHX6Q9UPM6 363 aa4.62□□□□□ -1.67
PDE1C-208ENST00000478736 PRIM1P49642 420 aaKnown RBP4.61□□□□□ -1.67
PDE1C-208ENST00000478736 POTEEQ6S8J3 1075 aa4.61□□□□□ -1.67
PDE1C-208ENST00000478736 VSIG10Q8N0Z9 540 aa4.61□□□□□ -1.67
PDE1C-208ENST00000478736 EVI5O60447 810 aa4.6□□□□□ -1.67
PDE1C-208ENST00000478736 MAP3K9P80192 1104 aa4.6□□□□□ -1.67
PDE1C-208ENST00000478736 MLLT3P42568 568 aaPredicted RBP4.59□□□□□ -1.67
PDE1C-208ENST00000478736 VARS2Q5ST30 1063 aaKnown RBP4.59□□□□□ -1.67
PDE1C-208ENST00000478736 ERBB3P21860 1342 aa4.58□□□□□ -1.68
PDE1C-208ENST00000478736 ZNF316A6NFI3 1004 aaPredicted RBP4.58□□□□□ -1.68
PDE1C-208ENST00000478736 SEMA3EO15041 775 aa4.58□□□□□ -1.68
PDE1C-208ENST00000478736 DDX12PQ92771 950 aa4.58□□□□□ -1.68
PDE1C-208ENST00000478736 ANO8Q9HCE9 1232 aaPredicted RBP4.58□□□□□ -1.68
PDE1C-208ENST00000478736 ZSWIM6Q9HCJ5 1215 aa4.58□□□□□ -1.68
PDE1C-208ENST00000478736 AXIN2Q9Y2T1 843 aa4.58□□□□□ -1.68
PDE1C-208ENST00000478736 RIMBP2O15034 1052 aa4.56□□□□□ -1.68
PDE1C-208ENST00000478736 PCDHGA10Q9Y5H3 936 aa4.56□□□□□ -1.68
PDE1C-208ENST00000478736 GRXCR2A6NFK2 248 aa4.55□□□□□ -1.68
PDE1C-208ENST00000478736 TBC1D12O60347 775 aa4.55□□□□□ -1.68
PDE1C-208ENST00000478736 PSEN2P49810 448 aa4.55□□□□□ -1.68
PDE1C-208ENST00000478736 PDIA6Q15084 440 aa4.55□□□□□ -1.68
PDE1C-208ENST00000478736 ZNF454Q8N9F8 522 aa4.55□□□□□ -1.68
PDE1C-208ENST00000478736 ARHGEF1Q92888 912 aaKnown RBP4.55□□□□□ -1.68
PDE1C-208ENST00000478736 ADAM33Q9BZ11 813 aa4.55□□□□□ -1.68
PDE1C-208ENST00000478736 PLA2G2EQ9NZK7 142 aa4.55□□□□□ -1.68
PDE1C-208ENST00000478736 ARIH1Q9Y4X5 557 aaPredicted RBP4.55□□□□□ -1.68
PDE1C-208ENST00000478736 FOSBP53539 338 aa4.54□□□□□ -1.68
PDE1C-208ENST00000478736 RBM33Q96EV2 1170 aaKnown RBP4.54□□□□□ -1.68
PDE1C-208ENST00000478736 OSBPP22059 807 aa4.53□□□□□ -1.68
PDE1C-208ENST00000478736 TSR1Q2NL82 804 aaKnown RBP4.53□□□□□ -1.68
PDE1C-208ENST00000478736 DMRTA1Q5VZB9 504 aa4.53□□□□□ -1.68
PDE1C-208ENST00000478736 COL9A1P20849 921 aa4.52□□□□□ -1.69
PDE1C-208ENST00000478736 ZNF687Q8N1G0 1237 aa4.52□□□□□ -1.69
PDE1C-208ENST00000478736 CDHR5Q9HBB8 845 aa4.52□□□□□ -1.69
PDE1C-208ENST00000478736 PTGER2P43116 358 aa4.51□□□□□ -1.69
PDE1C-208ENST00000478736 NBR1Q14596 966 aa4.51□□□□□ -1.69
PDE1C-208ENST00000478736 RBM26Q5T8P6 1007 aaKnown RBP4.51□□□□□ -1.69
PDE1C-208ENST00000478736 TESPA1A2RU30 521 aaPredicted RBP4.5□□□□□ -1.69
PDE1C-208ENST00000478736 C3orf80F5H4A9 247 aa4.5□□□□□ -1.69
PDE1C-208ENST00000478736 ZDHHC16Q969W1 377 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms