RNA–Protein interactions for RNA: ENST00000478708.2

PDPK1-211, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-211ENST00000478708 PCF11O94913 1555 aaKnown RBP30.72■■■□□ 2.51
PDPK1-211ENST00000478708 MYT1LQ9UL68 1186 aa30.72■■■□□ 2.51
PDPK1-211ENST00000478708 ZFYVE16Q7Z3T8 1539 aa30.72■■■□□ 2.51
PDPK1-211ENST00000478708 ZNF518AQ6AHZ1 1483 aa30.7■■■□□ 2.51
PDPK1-211ENST00000478708 RICTORQ6R327 1708 aa30.7■■■□□ 2.51
PDPK1-211ENST00000478708 PTPRMP28827 1452 aa30.63■■■□□ 2.49
PDPK1-211ENST00000478708 MTUS2Q5JR59 1369 aa30.61■■■□□ 2.49
PDPK1-211ENST00000478708 ATP10AO60312 1499 aa30.61■■■□□ 2.49
PDPK1-211ENST00000478708 ADAMTSL3P82987 1691 aa30.6■■■□□ 2.49
PDPK1-211ENST00000478708 YEATS2Q9ULM3 1422 aa30.59■■■□□ 2.49
PDPK1-211ENST00000478708 BCORL1Q5H9F3 1711 aa30.59■■■□□ 2.49
PDPK1-211ENST00000478708 C9orf84Q5VXU9 1444 aa30.58■■■□□ 2.49
PDPK1-211ENST00000478708 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
PDPK1-211ENST00000478708 AFAP1Q8N556 730 aa30.57■■■□□ 2.48
PDPK1-211ENST00000478708 HECW2Q9P2P5 1572 aa30.55■■■□□ 2.48
PDPK1-211ENST00000478708 LRRIQ1Q96JM4 1722 aa30.53■■■□□ 2.48
PDPK1-211ENST00000478708 CCNB3Q8WWL7 1395 aa30.53■■■□□ 2.48
PDPK1-211ENST00000478708 CFDP1Q9UEE9 299 aaPredicted RBP30.52■■■□□ 2.48
PDPK1-211ENST00000478708 ZNF777Q9ULD5 760 aaPredicted RBP30.52■■■□□ 2.48
PDPK1-211ENST00000478708 PREX2Q70Z35 1606 aa30.51■■■□□ 2.48
PDPK1-211ENST00000478708 MLECQ14165 292 aa30.51■■■□□ 2.47
PDPK1-211ENST00000478708 PLEKHH2Q8IVE3 1493 aa30.5■■■□□ 2.47
PDPK1-211ENST00000478708 MLH3Q9UHC1 1453 aa30.49■■■□□ 2.47
PDPK1-211ENST00000478708 ESF1Q9H501 851 aaKnown RBP30.48■■■□□ 2.47
PDPK1-211ENST00000478708 KDM5CP41229 1560 aa30.48■■■□□ 2.47
PDPK1-211ENST00000478708 MADDQ8WXG6 1647 aa30.47■■■□□ 2.47
PDPK1-211ENST00000478708 ABCC1P33527 1531 aa30.45■■■□□ 2.47
PDPK1-211ENST00000478708 GPATCH8Q9UKJ3 1502 aaKnown RBP30.43■■■□□ 2.46
PDPK1-211ENST00000478708 CDC42BPBQ9Y5S2 1711 aa30.42■■■□□ 2.46
PDPK1-211ENST00000478708 KIAA1107Q9UPP5 1409 aa30.42■■■□□ 2.46
PDPK1-211ENST00000478708 SPAG9O60271 1321 aaKnown RBP30.4■■■□□ 2.46
PDPK1-211ENST00000478708 TRAPPC8Q9Y2L5 1435 aa30.39■■■□□ 2.46
PDPK1-211ENST00000478708 EHBP1L1Q8N3D4 1523 aa30.39■■■□□ 2.46
PDPK1-211ENST00000478708 REREQ9P2R6 1566 aa30.37■■■□□ 2.45
PDPK1-211ENST00000478708 PLPPR3Q6T4P5 718 aa30.36■■■□□ 2.45
PDPK1-211ENST00000478708 RIMS1Q86UR5 1692 aaKnown RBP30.36■■■□□ 2.45
PDPK1-211ENST00000478708 CDC42BPAQ5VT25 1732 aa30.34■■■□□ 2.45
PDPK1-211ENST00000478708 HNRNPMP52272 730 aaKnown RBP eCLIP30.33■■■□□ 2.45
PDPK1-211ENST00000478708 ARHGEF12Q9NZN5 1544 aa30.32■■■□□ 2.44
PDPK1-211ENST00000478708 ITSN2Q9NZM3 1697 aa30.31■■■□□ 2.44
PDPK1-211ENST00000478708 DIP2CQ9Y2E4 1556 aa30.3■■■□□ 2.44
PDPK1-211ENST00000478708 RSPH4AQ5TD94 716 aa30.3■■■□□ 2.44
PDPK1-211ENST00000478708 AGLP35573 1532 aa30.3■■■□□ 2.44
PDPK1-211ENST00000478708 LOC105371045A0A1W2PR82 267 aa30.29■■■□□ 2.44
PDPK1-211ENST00000478708 VPS8Q8N3P4 1428 aa30.29■■■□□ 2.44
PDPK1-211ENST00000478708 SYCP2Q9BX26 1530 aa30.27■■■□□ 2.44
PDPK1-211ENST00000478708 FER1L4A9Z1Z3 1794 aa30.26■■■□□ 2.44
PDPK1-211ENST00000478708 SAMD9LQ8IVG5 1584 aa30.26■■■□□ 2.43
PDPK1-211ENST00000478708 CNTLNQ9NXG0 1405 aa30.25■■■□□ 2.43
PDPK1-211ENST00000478708 APLP2Q06481 763 aa30.25■■■□□ 2.43
PDPK1-211ENST00000478708 LMTK3Q96Q04 1460 aa30.24■■■□□ 2.43
PDPK1-211ENST00000478708 ABCA6Q8N139 1617 aa30.21■■■□□ 2.43
PDPK1-211ENST00000478708 PPP6R1Q9UPN7 881 aa30.19■■■□□ 2.42
PDPK1-211ENST00000478708 SIGLEC1Q9BZZ2 1709 aa30.18■■■□□ 2.42
PDPK1-211ENST00000478708 NCOA2Q15596 1464 aa30.17■■■□□ 2.42
PDPK1-211ENST00000478708 ATP7AQ04656 1500 aa30.17■■■□□ 2.42
PDPK1-211ENST00000478708 SUPT6HQ7KZ85 1726 aaKnown RBP30.16■■■□□ 2.42
PDPK1-211ENST00000478708 TIAM1Q13009 1591 aa30.16■■■□□ 2.42
PDPK1-211ENST00000478708 KIDINS220Q9ULH0 1771 aa30.15■■■□□ 2.42
PDPK1-211ENST00000478708 RTEL1-TNFRSF6BF6WH68 1400 aa30.14■■■□□ 2.42
PDPK1-211ENST00000478708 TSPY4P0CV99 314 aa30.14■■■□□ 2.42
PDPK1-211ENST00000478708 TSPY10P0CW01 314 aa30.14■■■□□ 2.42
PDPK1-211ENST00000478708 UHRF1BP1Q6BDS2 1440 aa30.13■■■□□ 2.41
PDPK1-211ENST00000478708 A2MP01023 1474 aa30.13■■■□□ 2.41
PDPK1-211ENST00000478708 MAP3K1Q13233 1512 aa30.13■■■□□ 2.41
PDPK1-211ENST00000478708 CEBPAP49715 358 aaPredicted RBP30.13■■■□□ 2.41
PDPK1-211ENST00000478708 DMRT2Q9Y5R5 561 aa30.13■■■□□ 2.41
PDPK1-211ENST00000478708 HSPA2P54652 639 aa30.11■■■□□ 2.41
PDPK1-211ENST00000478708 ZNF644Q9H582 1327 aaPredicted RBP30.11■■■□□ 2.41
PDPK1-211ENST00000478708 LRRC9Q6ZRR7 1453 aa30.1■■■□□ 2.41
PDPK1-211ENST00000478708 MBD5Q9P267 1494 aa30.08■■■□□ 2.41
PDPK1-211ENST00000478708 ILDR1Q86SU0 546 aaPredicted RBP30.07■■■□□ 2.4
PDPK1-211ENST00000478708 CCDC141Q6ZP82 1450 aa30.06■■■□□ 2.4
PDPK1-211ENST00000478708 INO80Q9ULG1 1556 aaPredicted RBP30.06■■■□□ 2.4
PDPK1-211ENST00000478708 GGT6Q6P531 493 aa30.05■■■□□ 2.4
PDPK1-211ENST00000478708 PREX1Q8TCU6 1659 aa30.02■■■□□ 2.4
PDPK1-211ENST00000478708 CAMSAP2Q08AD1 1489 aa30.02■■■□□ 2.4
PDPK1-211ENST00000478708 DHX29Q7Z478 1369 aaKnown RBP30.02■■■□□ 2.4
PDPK1-211ENST00000478708 NPATQ14207 1427 aa30.01■■■□□ 2.39
PDPK1-211ENST00000478708 ZMYM3Q14202 1370 aa30.01■■■□□ 2.39
PDPK1-211ENST00000478708 SETD1BQ9UPS6 1966 aaKnown RBP30.01■■■□□ 2.39
PDPK1-211ENST00000478708 MIA2Q96PC5 1412 aa29.99■■■□□ 2.39
PDPK1-211ENST00000478708 PLXNC1O60486 1568 aa29.98■■■□□ 2.39
PDPK1-211ENST00000478708 ADGBQ8N7X0 1667 aa29.98■■■□□ 2.39
PDPK1-211ENST00000478708 FBXO41Q8TF61 875 aa29.96■■■□□ 2.39
PDPK1-211ENST00000478708 KIF3BO15066 747 aa29.93■■■□□ 2.38
PDPK1-211ENST00000478708 ARHGEF5Q12774 1597 aa29.92■■■□□ 2.38
PDPK1-211ENST00000478708 KANK4Q5T7N3 995 aaPredicted RBP29.92■■■□□ 2.38
PDPK1-211ENST00000478708 MYOM3Q5VTT5 1437 aa29.92■■■□□ 2.38
PDPK1-211ENST00000478708 MROH2AA6NES4 1674 aa29.91■■■□□ 2.38
PDPK1-211ENST00000478708 C3P01024 1663 aa29.91■■■□□ 2.38
PDPK1-211ENST00000478708 FAM135AQ9P2D6 1515 aa29.87■■■□□ 2.37
PDPK1-211ENST00000478708 WASHC2CQ9Y4E1 1318 aa29.86■■■□□ 2.37
PDPK1-211ENST00000478708 PTPRTO14522 1441 aa29.79■■■□□ 2.36
PDPK1-211ENST00000478708 CERKQ8TCT0 537 aa29.77■■■□□ 2.36
PDPK1-211ENST00000478708 PTPRKQ15262 1439 aa29.77■■■□□ 2.36
PDPK1-211ENST00000478708 CLTCQ00610 1675 aaKnown RBP29.76■■■□□ 2.36
PDPK1-211ENST00000478708 PKD2Q13563 968 aa29.76■■■□□ 2.35
PDPK1-211ENST00000478708 KDM5DQ9BY66 1539 aa29.75■■■□□ 2.35
PDPK1-211ENST00000478708 MAST1Q9Y2H9 1570 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms