RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 PREX2Q70Z35 1606 aa30.34■■■□□ 2.45
SREBF1-212ENST00000478616 SIGLEC1Q9BZZ2 1709 aa30.33■■■□□ 2.45
SREBF1-212ENST00000478616 ARHGEF40Q8TER5 1519 aa30.32■■■□□ 2.44
SREBF1-212ENST00000478616 SCAPERQ9BY12 1400 aa30.3■■■□□ 2.44
SREBF1-212ENST00000478616 POGZQ7Z3K3 1410 aa30.29■■■□□ 2.44
SREBF1-212ENST00000478616 ARHGAP5Q13017 1502 aa30.27■■■□□ 2.44
SREBF1-212ENST00000478616 YEATS2Q9ULM3 1422 aa30.25■■■□□ 2.43
SREBF1-212ENST00000478616 EFCAB2Q5VUJ9 269 aa30.24■■■□□ 2.43
SREBF1-212ENST00000478616 ARHGEF12Q9NZN5 1544 aa30.23■■■□□ 2.43
SREBF1-212ENST00000478616 ADAMTSL3P82987 1691 aa30.22■■■□□ 2.43
SREBF1-212ENST00000478616 ABCC1P33527 1531 aa30.2■■■□□ 2.42
SREBF1-212ENST00000478616 GPATCH8Q9UKJ3 1502 aaKnown RBP30.2■■■□□ 2.42
SREBF1-212ENST00000478616 KDM5CP41229 1560 aa30.2■■■□□ 2.42
SREBF1-212ENST00000478616 ZFYVE16Q7Z3T8 1539 aa30.19■■■□□ 2.42
SREBF1-212ENST00000478616 ITSN2Q9NZM3 1697 aa30.19■■■□□ 2.42
SREBF1-212ENST00000478616 BCORL1Q5H9F3 1711 aa30.19■■■□□ 2.42
SREBF1-212ENST00000478616 SAMD9LQ8IVG5 1584 aa30.16■■■□□ 2.42
SREBF1-212ENST00000478616 MAGI2Q86UL8 1455 aa30.16■■■□□ 2.42
SREBF1-212ENST00000478616 VPS8Q8N3P4 1428 aa30.14■■■□□ 2.42
SREBF1-212ENST00000478616 EHBP1L1Q8N3D4 1523 aa30.13■■■□□ 2.41
SREBF1-212ENST00000478616 TRAPPC8Q9Y2L5 1435 aa30.13■■■□□ 2.41
SREBF1-212ENST00000478616 TIAM1Q13009 1591 aa30.11■■■□□ 2.41
SREBF1-212ENST00000478616 AFAP1Q8N556 730 aa30.1■■■□□ 2.41
SREBF1-212ENST00000478616 ZNF518AQ6AHZ1 1483 aa30.1■■■□□ 2.41
SREBF1-212ENST00000478616 MTUS2Q5JR59 1369 aa30.09■■■□□ 2.41
SREBF1-212ENST00000478616 MADDQ8WXG6 1647 aa30.08■■■□□ 2.41
SREBF1-212ENST00000478616 HECW2Q9P2P5 1572 aa30.07■■■□□ 2.4
SREBF1-212ENST00000478616 ABCA6Q8N139 1617 aa30.05■■■□□ 2.4
SREBF1-212ENST00000478616 DIP2CQ9Y2E4 1556 aa30.05■■■□□ 2.4
SREBF1-212ENST00000478616 KIDINS220Q9ULH0 1771 aa30.03■■■□□ 2.4
SREBF1-212ENST00000478616 SYCP2Q9BX26 1530 aa30.03■■■□□ 2.4
SREBF1-212ENST00000478616 ATP10AO60312 1499 aa30.01■■■□□ 2.4
SREBF1-212ENST00000478616 MLH3Q9UHC1 1453 aa30.01■■■□□ 2.4
SREBF1-212ENST00000478616 CCNB3Q8WWL7 1395 aa29.99■■■□□ 2.39
SREBF1-212ENST00000478616 PTPRMP28827 1452 aa29.99■■■□□ 2.39
SREBF1-212ENST00000478616 SUPT6HQ7KZ85 1726 aaKnown RBP29.98■■■□□ 2.39
SREBF1-212ENST00000478616 NCOA2Q15596 1464 aa29.98■■■□□ 2.39
SREBF1-212ENST00000478616 C9orf84Q5VXU9 1444 aa29.97■■■□□ 2.39
SREBF1-212ENST00000478616 RIMS1Q86UR5 1692 aaKnown RBP29.97■■■□□ 2.39
SREBF1-212ENST00000478616 LRRC9Q6ZRR7 1453 aa29.96■■■□□ 2.39
SREBF1-212ENST00000478616 REREQ9P2R6 1566 aa29.95■■■□□ 2.39
SREBF1-212ENST00000478616 MAP3K1Q13233 1512 aa29.95■■■□□ 2.38
SREBF1-212ENST00000478616 ARID4BQ4LE39 1312 aaPredicted RBP29.95■■■□□ 2.38
SREBF1-212ENST00000478616 ZNF777Q9ULD5 760 aaPredicted RBP29.94■■■□□ 2.38
SREBF1-212ENST00000478616 KIAA1107Q9UPP5 1409 aa29.94■■■□□ 2.38
SREBF1-212ENST00000478616 ZNF644Q9H582 1327 aaPredicted RBP29.94■■■□□ 2.38
SREBF1-212ENST00000478616 KANK4Q5T7N3 995 aaPredicted RBP29.92■■■□□ 2.38
SREBF1-212ENST00000478616 CFDP1Q9UEE9 299 aaPredicted RBP29.92■■■□□ 2.38
SREBF1-212ENST00000478616 HNRNPMP52272 730 aaKnown RBP eCLIP29.91■■■□□ 2.38
SREBF1-212ENST00000478616 MBD5Q9P267 1494 aa29.91■■■□□ 2.38
SREBF1-212ENST00000478616 INO80Q9ULG1 1556 aaPredicted RBP29.9■■■□□ 2.38
SREBF1-212ENST00000478616 FER1L4A9Z1Z3 1794 aa29.89■■■□□ 2.38
SREBF1-212ENST00000478616 PLEKHH2Q8IVE3 1493 aa29.87■■■□□ 2.37
SREBF1-212ENST00000478616 AGLP35573 1532 aa29.82■■■□□ 2.36
SREBF1-212ENST00000478616 ATP7AQ04656 1500 aa29.82■■■□□ 2.36
SREBF1-212ENST00000478616 MLECQ14165 292 aa29.81■■■□□ 2.36
SREBF1-212ENST00000478616 CAMSAP2Q08AD1 1489 aa29.8■■■□□ 2.36
SREBF1-212ENST00000478616 PLXNC1O60486 1568 aa29.77■■■□□ 2.36
SREBF1-212ENST00000478616 SPAG9O60271 1321 aaKnown RBP29.75■■■□□ 2.35
SREBF1-212ENST00000478616 MYT1LQ9UL68 1186 aa29.73■■■□□ 2.35
SREBF1-212ENST00000478616 ADGBQ8N7X0 1667 aa29.72■■■□□ 2.35
SREBF1-212ENST00000478616 ARHGEF5Q12774 1597 aa29.7■■■□□ 2.35
SREBF1-212ENST00000478616 LMTK3Q96Q04 1460 aa29.68■■■□□ 2.34
SREBF1-212ENST00000478616 CCDC141Q6ZP82 1450 aa29.68■■■□□ 2.34
SREBF1-212ENST00000478616 MYOM3Q5VTT5 1437 aa29.67■■■□□ 2.34
SREBF1-212ENST00000478616 A2MP01023 1474 aa29.66■■■□□ 2.34
SREBF1-212ENST00000478616 RTEL1-TNFRSF6BF6WH68 1400 aa29.65■■■□□ 2.34
SREBF1-212ENST00000478616 C3P01024 1663 aa29.64■■■□□ 2.34
SREBF1-212ENST00000478616 CEBPAP49715 358 aaPredicted RBP29.61■■■□□ 2.33
SREBF1-212ENST00000478616 MIA2Q96PC5 1412 aa29.61■■■□□ 2.33
SREBF1-212ENST00000478616 PLPPR3Q6T4P5 718 aa29.58■■■□□ 2.33
SREBF1-212ENST00000478616 MAST1Q9Y2H9 1570 aa29.56■■■□□ 2.32
SREBF1-212ENST00000478616 PTPN23Q9H3S7 1636 aa29.54■■■□□ 2.32
SREBF1-212ENST00000478616 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
SREBF1-212ENST00000478616 CLTCQ00610 1675 aaKnown RBP29.53■■■□□ 2.32
SREBF1-212ENST00000478616 PREX1Q8TCU6 1659 aa29.53■■■□□ 2.32
SREBF1-212ENST00000478616 DHX29Q7Z478 1369 aaKnown RBP29.52■■■□□ 2.32
SREBF1-212ENST00000478616 RSPH4AQ5TD94 716 aa29.51■■■□□ 2.31
SREBF1-212ENST00000478616 CROCC2H7BZ55 1655 aa29.5■■■□□ 2.31
SREBF1-212ENST00000478616 SETD1BQ9UPS6 1966 aaKnown RBP29.49■■■□□ 2.31
SREBF1-212ENST00000478616 TCOF1Q13428 1488 aaKnown RBP29.48■■■□□ 2.31
SREBF1-212ENST00000478616 FGD6Q6ZV73 1430 aa29.47■■■□□ 2.31
SREBF1-212ENST00000478616 APLP2Q06481 763 aa29.47■■■□□ 2.31
SREBF1-212ENST00000478616 CNTLNQ9NXG0 1405 aa29.45■■■□□ 2.31
SREBF1-212ENST00000478616 HSPA2P54652 639 aa29.45■■■□□ 2.31
SREBF1-212ENST00000478616 ABCC5O15440 1437 aa29.45■■■□□ 2.3
SREBF1-212ENST00000478616 DNMT1P26358 1616 aaKnown RBP29.42■■■□□ 2.3
SREBF1-212ENST00000478616 ZMYM3Q14202 1370 aa29.39■■■□□ 2.3
SREBF1-212ENST00000478616 GGT6Q6P531 493 aa29.39■■■□□ 2.3
SREBF1-212ENST00000478616 SHANK2Q9UPX8 1470 aa29.37■■■□□ 2.29
SREBF1-212ENST00000478616 TSPY4P0CV99 314 aa29.37■■■□□ 2.29
SREBF1-212ENST00000478616 TSPY10P0CW01 314 aa29.37■■■□□ 2.29
SREBF1-212ENST00000478616 MROH1Q8NDA8 1641 aa29.37■■■□□ 2.29
SREBF1-212ENST00000478616 RNF17Q9BXT8 1623 aaKnown RBP29.37■■■□□ 2.29
SREBF1-212ENST00000478616 DAPK1P53355 1430 aa29.37■■■□□ 2.29
SREBF1-212ENST00000478616 STRCQ7RTU9 1775 aa29.36■■■□□ 2.29
SREBF1-212ENST00000478616 KIF3BO15066 747 aa29.34■■■□□ 2.29
SREBF1-212ENST00000478616 PTPRKQ15262 1439 aa29.34■■■□□ 2.29
SREBF1-212ENST00000478616 EIF2AK4Q9P2K8 1649 aaKnown RBP29.34■■■□□ 2.29
SREBF1-212ENST00000478616 NPATQ14207 1427 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms