RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 PREX2Q70Z35 1606 aa12.55□□□□□ -0.4
DDX39B-218ENST00000478365 ARHGAP5Q13017 1502 aa12.54□□□□□ -0.4
DDX39B-218ENST00000478365 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
DDX39B-218ENST00000478365 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
DDX39B-218ENST00000478365 TIAM1Q13009 1591 aa12.52□□□□□ -0.4
DDX39B-218ENST00000478365 ZMYM4Q5VZL5 1548 aa12.52□□□□□ -0.41
DDX39B-218ENST00000478365 RICTORQ6R327 1708 aa12.51□□□□□ -0.41
DDX39B-218ENST00000478365 CCNB3Q8WWL7 1395 aa12.51□□□□□ -0.41
DDX39B-218ENST00000478365 PLEKHH2Q8IVE3 1493 aa12.51□□□□□ -0.41
DDX39B-218ENST00000478365 ITSN2Q9NZM3 1697 aa12.51□□□□□ -0.41
DDX39B-218ENST00000478365 SUPT6HQ7KZ85 1726 aaKnown RBP12.51□□□□□ -0.41
DDX39B-218ENST00000478365 APLP2Q06481 763 aa12.5□□□□□ -0.41
DDX39B-218ENST00000478365 POGZQ7Z3K3 1410 aa12.5□□□□□ -0.41
DDX39B-218ENST00000478365 SCAPERQ9BY12 1400 aa12.5□□□□□ -0.41
DDX39B-218ENST00000478365 ZNF518AQ6AHZ1 1483 aa12.5□□□□□ -0.41
DDX39B-218ENST00000478365 FRMPD1Q5SYB0 1578 aa12.5□□□□□ -0.41
DDX39B-218ENST00000478365 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
DDX39B-218ENST00000478365 CDC42BPBQ9Y5S2 1711 aa12.5□□□□□ -0.41
DDX39B-218ENST00000478365 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
DDX39B-218ENST00000478365 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
DDX39B-218ENST00000478365 RAPGEF3O95398 923 aa12.47□□□□□ -0.41
DDX39B-218ENST00000478365 ABCC1P33527 1531 aa12.47□□□□□ -0.41
DDX39B-218ENST00000478365 KIAA1107Q9UPP5 1409 aa12.46□□□□□ -0.41
DDX39B-218ENST00000478365 ZFYVE16Q7Z3T8 1539 aa12.46□□□□□ -0.42
DDX39B-218ENST00000478365 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.42
DDX39B-218ENST00000478365 KDM5CP41229 1560 aa12.45□□□□□ -0.42
DDX39B-218ENST00000478365 CFDP1Q9UEE9 299 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-218ENST00000478365 NCOA2Q15596 1464 aa12.44□□□□□ -0.42
DDX39B-218ENST00000478365 HECW2Q9P2P5 1572 aa12.43□□□□□ -0.42
DDX39B-218ENST00000478365 MLH3Q9UHC1 1453 aa12.42□□□□□ -0.42
DDX39B-218ENST00000478365 SAMD9LQ8IVG5 1584 aa12.41□□□□□ -0.42
DDX39B-218ENST00000478365 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
DDX39B-218ENST00000478365 ATP10AO60312 1499 aa12.4□□□□□ -0.43
DDX39B-218ENST00000478365 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
DDX39B-218ENST00000478365 SYCP2Q9BX26 1530 aa12.39□□□□□ -0.43
DDX39B-218ENST00000478365 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-218ENST00000478365 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
DDX39B-218ENST00000478365 MIA2Q96PC5 1412 aa12.38□□□□□ -0.43
DDX39B-218ENST00000478365 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
DDX39B-218ENST00000478365 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
DDX39B-218ENST00000478365 MYOM3Q5VTT5 1437 aa12.37□□□□□ -0.43
DDX39B-218ENST00000478365 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
DDX39B-218ENST00000478365 ARID4BQ4LE39 1312 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-218ENST00000478365 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
DDX39B-218ENST00000478365 PLPPR3Q6T4P5 718 aa12.36□□□□□ -0.43
DDX39B-218ENST00000478365 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
DDX39B-218ENST00000478365 MYT1LQ9UL68 1186 aa12.36□□□□□ -0.43
DDX39B-218ENST00000478365 BCORL1Q5H9F3 1711 aa12.36□□□□□ -0.43
DDX39B-218ENST00000478365 SPAG9O60271 1321 aaKnown RBP12.36□□□□□ -0.43
DDX39B-218ENST00000478365 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
DDX39B-218ENST00000478365 ARHGEF5Q12774 1597 aa12.35□□□□□ -0.43
DDX39B-218ENST00000478365 DIP2CQ9Y2E4 1556 aa12.35□□□□□ -0.43
DDX39B-218ENST00000478365 CCDC141Q6ZP82 1450 aa12.34□□□□□ -0.43
DDX39B-218ENST00000478365 AGLP35573 1532 aa12.34□□□□□ -0.43
DDX39B-218ENST00000478365 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
DDX39B-218ENST00000478365 ADAMTSL3P82987 1691 aa12.34□□□□□ -0.43
DDX39B-218ENST00000478365 RTEL1-TNFRSF6BF6WH68 1400 aa12.34□□□□□ -0.43
DDX39B-218ENST00000478365 KIDINS220Q9ULH0 1771 aa12.33□□□□□ -0.44
DDX39B-218ENST00000478365 KANK4Q5T7N3 995 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-218ENST00000478365 INO80Q9ULG1 1556 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-218ENST00000478365 MBD5Q9P267 1494 aa12.33□□□□□ -0.44
DDX39B-218ENST00000478365 ABCA6Q8N139 1617 aa12.33□□□□□ -0.44
DDX39B-218ENST00000478365 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.44
DDX39B-218ENST00000478365 ADGBQ8N7X0 1667 aa12.31□□□□□ -0.44
DDX39B-218ENST00000478365 TSPY4P0CV99 314 aa12.3□□□□□ -0.44
DDX39B-218ENST00000478365 TSPY10P0CW01 314 aa12.3□□□□□ -0.44
DDX39B-218ENST00000478365 FGD6Q6ZV73 1430 aa12.28□□□□□ -0.44
DDX39B-218ENST00000478365 MADDQ8WXG6 1647 aa12.28□□□□□ -0.44
DDX39B-218ENST00000478365 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
DDX39B-218ENST00000478365 FER1L4A9Z1Z3 1794 aa12.28□□□□□ -0.44
DDX39B-218ENST00000478365 A2MP01023 1474 aa12.27□□□□□ -0.44
DDX39B-218ENST00000478365 PLXNC1O60486 1568 aa12.27□□□□□ -0.44
DDX39B-218ENST00000478365 MAST1Q9Y2H9 1570 aa12.27□□□□□ -0.44
DDX39B-218ENST00000478365 PTPN23Q9H3S7 1636 aa12.27□□□□□ -0.44
DDX39B-218ENST00000478365 CNTLNQ9NXG0 1405 aa12.27□□□□□ -0.45
DDX39B-218ENST00000478365 PTPRMP28827 1452 aa12.27□□□□□ -0.45
DDX39B-218ENST00000478365 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.45
DDX39B-218ENST00000478365 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.45
DDX39B-218ENST00000478365 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
DDX39B-218ENST00000478365 FAM135AQ9P2D6 1515 aa12.26□□□□□ -0.45
DDX39B-218ENST00000478365 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
DDX39B-218ENST00000478365 SIGLEC1Q9BZZ2 1709 aa12.25□□□□□ -0.45
DDX39B-218ENST00000478365 MSH5O43196 834 aa12.24□□□□□ -0.45
DDX39B-218ENST00000478365 RIMS1Q86UR5 1692 aaKnown RBP12.24□□□□□ -0.45
DDX39B-218ENST00000478365 DHX29Q7Z478 1369 aaKnown RBP12.23□□□□□ -0.45
DDX39B-218ENST00000478365 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
DDX39B-218ENST00000478365 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
DDX39B-218ENST00000478365 CROCC2H7BZ55 1655 aa12.22□□□□□ -0.45
DDX39B-218ENST00000478365 SETD1BQ9UPS6 1966 aaKnown RBP12.21□□□□□ -0.45
DDX39B-218ENST00000478365 MLECQ14165 292 aa12.21□□□□□ -0.45
DDX39B-218ENST00000478365 MROH2AA6NES4 1674 aa12.2□□□□□ -0.46
DDX39B-218ENST00000478365 DAPK1P53355 1430 aa12.2□□□□□ -0.46
DDX39B-218ENST00000478365 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX39B-218ENST00000478365 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
DDX39B-218ENST00000478365 ADRA2BP18089 450 aa12.19□□□□□ -0.46
DDX39B-218ENST00000478365 DUOX2Q9NRD8 1548 aa12.19□□□□□ -0.46
DDX39B-218ENST00000478365 ABCC5O15440 1437 aa12.19□□□□□ -0.46
DDX39B-218ENST00000478365 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
DDX39B-218ENST00000478365 ANKRD30AQ9BXX3 1397 aa12.18□□□□□ -0.46
DDX39B-218ENST00000478365 ERBINQ96RT1 1412 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms