RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 FANCAO15360 1455 aa28.27■■■□□ 2.12
PLOD3-213ENST00000478264 NEO1Q92859 1461 aa28.27■■■□□ 2.12
PLOD3-213ENST00000478264 CDC42BPBQ9Y5S2 1711 aa28.27■■■□□ 2.12
PLOD3-213ENST00000478264 PHLDB1Q86UU1 1377 aa28.23■■■□□ 2.11
PLOD3-213ENST00000478264 EFCAB2Q5VUJ9 269 aa28.21■■■□□ 2.11
PLOD3-213ENST00000478264 MYOM3Q5VTT5 1437 aa28.2■■■□□ 2.11
PLOD3-213ENST00000478264 AKNAQ7Z591 1439 aa28.18■■■□□ 2.1
PLOD3-213ENST00000478264 CFDP1Q9UEE9 299 aaPredicted RBP28.18■■■□□ 2.1
PLOD3-213ENST00000478264 PPARGC1BQ86YN6 1023 aaKnown RBP28.16■■■□□ 2.1
PLOD3-213ENST00000478264 MIA2Q96PC5 1412 aa28.15■■■□□ 2.1
PLOD3-213ENST00000478264 ADGRL1O94910 1474 aa28.15■■■□□ 2.1
PLOD3-213ENST00000478264 SAMD9LQ8IVG5 1584 aa28.14■■■□□ 2.1
PLOD3-213ENST00000478264 KDM6BO15054 1643 aa28.13■■■□□ 2.09
PLOD3-213ENST00000478264 ABCC1P33527 1531 aa28.13■■■□□ 2.09
PLOD3-213ENST00000478264 PLEKHH2Q8IVE3 1493 aa28.1■■■□□ 2.09
PLOD3-213ENST00000478264 ZNF777Q9ULD5 760 aaPredicted RBP28.09■■■□□ 2.09
PLOD3-213ENST00000478264 FGD6Q6ZV73 1430 aa28.09■■■□□ 2.09
PLOD3-213ENST00000478264 CAMSAP2Q08AD1 1489 aa28.08■■■□□ 2.09
PLOD3-213ENST00000478264 SCAPERQ9BY12 1400 aa28.07■■■□□ 2.08
PLOD3-213ENST00000478264 COL17A1Q9UMD9 1497 aaPredicted RBP28.07■■■□□ 2.08
PLOD3-213ENST00000478264 KIAA1107Q9UPP5 1409 aa28.06■■■□□ 2.08
PLOD3-213ENST00000478264 DENND4BO75064 1496 aaPredicted RBP28.06■■■□□ 2.08
PLOD3-213ENST00000478264 SYCP2Q9BX26 1530 aa28.05■■■□□ 2.08
PLOD3-213ENST00000478264 PTPN23Q9H3S7 1636 aa28.04■■■□□ 2.08
PLOD3-213ENST00000478264 ARHGEF12Q9NZN5 1544 aa28.02■■■□□ 2.08
PLOD3-213ENST00000478264 POGZQ7Z3K3 1410 aa28.02■■■□□ 2.08
PLOD3-213ENST00000478264 TCOF1Q13428 1488 aaKnown RBP28.02■■■□□ 2.08
PLOD3-213ENST00000478264 ZNF644Q9H582 1327 aaPredicted RBP28.01■■■□□ 2.07
PLOD3-213ENST00000478264 FRMPD1Q5SYB0 1578 aa28.01■■■□□ 2.07
PLOD3-213ENST00000478264 RICTORQ6R327 1708 aa28.01■■■□□ 2.07
PLOD3-213ENST00000478264 ZNF518AQ6AHZ1 1483 aa27.99■■■□□ 2.07
PLOD3-213ENST00000478264 MBD5Q9P267 1494 aa27.96■■■□□ 2.07
PLOD3-213ENST00000478264 RAPGEF3O95398 923 aa27.96■■■□□ 2.07
PLOD3-213ENST00000478264 TRAPPC8Q9Y2L5 1435 aa27.95■■■□□ 2.07
PLOD3-213ENST00000478264 KDM5CP41229 1560 aa27.94■■■□□ 2.06
PLOD3-213ENST00000478264 ARHGEF5Q12774 1597 aa27.94■■■□□ 2.06
PLOD3-213ENST00000478264 ZMYM4Q5VZL5 1548 aa27.94■■■□□ 2.06
PLOD3-213ENST00000478264 HNRNPMP52272 730 aaKnown RBP eCLIP27.94■■■□□ 2.06
PLOD3-213ENST00000478264 RRBP1Q9P2E9 1410 aaKnown RBP27.92■■■□□ 2.06
PLOD3-213ENST00000478264 CCDC141Q6ZP82 1450 aa27.92■■■□□ 2.06
PLOD3-213ENST00000478264 RSPH4AQ5TD94 716 aa27.9■■■□□ 2.06
PLOD3-213ENST00000478264 AFAP1Q8N556 730 aa27.89■■■□□ 2.06
PLOD3-213ENST00000478264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
PLOD3-213ENST00000478264 HECW2Q9P2P5 1572 aa27.87■■■□□ 2.05
PLOD3-213ENST00000478264 MAGI2Q86UL8 1455 aa27.87■■■□□ 2.05
PLOD3-213ENST00000478264 DNMT1P26358 1616 aaKnown RBP27.86■■■□□ 2.05
PLOD3-213ENST00000478264 FAM50AQ14320 339 aaKnown RBP27.86■■■□□ 2.05
PLOD3-213ENST00000478264 MLH3Q9UHC1 1453 aa27.84■■■□□ 2.05
PLOD3-213ENST00000478264 CROCC2H7BZ55 1655 aa27.83■■■□□ 2.05
PLOD3-213ENST00000478264 DAPK1P53355 1430 aa27.83■■■□□ 2.05
PLOD3-213ENST00000478264 INO80Q9ULG1 1556 aaPredicted RBP27.82■■■□□ 2.04
PLOD3-213ENST00000478264 ZFYVE16Q7Z3T8 1539 aa27.82■■■□□ 2.04
PLOD3-213ENST00000478264 SPAG9O60271 1321 aaKnown RBP27.81■■■□□ 2.04
PLOD3-213ENST00000478264 SHANK2Q9UPX8 1470 aa27.81■■■□□ 2.04
PLOD3-213ENST00000478264 ARHGEF40Q8TER5 1519 aa27.81■■■□□ 2.04
PLOD3-213ENST00000478264 ABCC5O15440 1437 aa27.8■■■□□ 2.04
PLOD3-213ENST00000478264 ATP7AQ04656 1500 aa27.8■■■□□ 2.04
PLOD3-213ENST00000478264 MAST1Q9Y2H9 1570 aa27.8■■■□□ 2.04
PLOD3-213ENST00000478264 RTEL1-TNFRSF6BF6WH68 1400 aa27.78■■■□□ 2.04
PLOD3-213ENST00000478264 TSPY4P0CV99 314 aa27.78■■■□□ 2.04
PLOD3-213ENST00000478264 TSPY10P0CW01 314 aa27.78■■■□□ 2.04
PLOD3-213ENST00000478264 KIDINS220Q9ULH0 1771 aa27.78■■■□□ 2.04
PLOD3-213ENST00000478264 C9orf84Q5VXU9 1444 aa27.76■■■□□ 2.04
PLOD3-213ENST00000478264 YEATS2Q9ULM3 1422 aa27.76■■■□□ 2.04
PLOD3-213ENST00000478264 MYT1LQ9UL68 1186 aa27.75■■■□□ 2.03
PLOD3-213ENST00000478264 ABCA6Q8N139 1617 aa27.74■■■□□ 2.03
PLOD3-213ENST00000478264 DIP2CQ9Y2E4 1556 aa27.73■■■□□ 2.03
PLOD3-213ENST00000478264 PLXNC1O60486 1568 aa27.69■■■□□ 2.02
PLOD3-213ENST00000478264 ATP10AO60312 1499 aa27.68■■■□□ 2.02
PLOD3-213ENST00000478264 REREQ9P2R6 1566 aa27.67■■■□□ 2.02
PLOD3-213ENST00000478264 ADGBQ8N7X0 1667 aa27.67■■■□□ 2.02
PLOD3-213ENST00000478264 ADGRL2O95490 1459 aa27.66■■■□□ 2.02
PLOD3-213ENST00000478264 PTPRKQ15262 1439 aa27.66■■■□□ 2.02
PLOD3-213ENST00000478264 ITGAEP38570 1179 aa27.63■■■□□ 2.01
PLOD3-213ENST00000478264 ANKRD30AQ9BXX3 1397 aa27.62■■■□□ 2.01
PLOD3-213ENST00000478264 CHIC2Q9UKJ5 165 aa27.61■■■□□ 2.01
PLOD3-213ENST00000478264 A2MP01023 1474 aa27.61■■■□□ 2.01
PLOD3-213ENST00000478264 ROCK1Q13464 1354 aa27.6■■■□□ 2.01
PLOD3-213ENST00000478264 NCOA1Q15788 1441 aa27.59■■■□□ 2.01
PLOD3-213ENST00000478264 KIF15Q9NS87 1388 aa27.58■■■□□ 2.01
PLOD3-213ENST00000478264 DUOX2Q9NRD8 1548 aa27.57■■■□□ 2
PLOD3-213ENST00000478264 DHX29Q7Z478 1369 aaKnown RBP27.56■■■□□ 2
PLOD3-213ENST00000478264 SIGLEC1Q9BZZ2 1709 aa27.55■■■□□ 2
PLOD3-213ENST00000478264 AGLP35573 1532 aa27.55■■■□□ 2
PLOD3-213ENST00000478264 RRP7BPQ9NSQ0 103 aa27.53■■■□□ 2
PLOD3-213ENST00000478264 ERBINQ96RT1 1412 aa27.5■■□□□ 1.99
PLOD3-213ENST00000478264 EIF2AK4Q9P2K8 1649 aaKnown RBP27.49■■□□□ 1.99
PLOD3-213ENST00000478264 ARID4BQ4LE39 1312 aaPredicted RBP27.48■■□□□ 1.99
PLOD3-213ENST00000478264 BCORL1Q5H9F3 1711 aa27.47■■□□□ 1.99
PLOD3-213ENST00000478264 AEBP2Q6ZN18 517 aaPredicted RBP27.47■■□□□ 1.99
PLOD3-213ENST00000478264 HFM1A2PYH4 1435 aa27.44■■□□□ 1.98
PLOD3-213ENST00000478264 ANKRD50Q9ULJ7 1429 aa27.44■■□□□ 1.98
PLOD3-213ENST00000478264 GCC2Q8IWJ2 1684 aa27.44■■□□□ 1.98
PLOD3-213ENST00000478264 NAIPQ13075 1403 aa27.41■■□□□ 1.98
PLOD3-213ENST00000478264 TRIM26Q12899 539 aaPredicted RBP27.4■■□□□ 1.98
PLOD3-213ENST00000478264 RNF17Q9BXT8 1623 aaKnown RBP27.39■■□□□ 1.98
PLOD3-213ENST00000478264 KIF3BO15066 747 aa27.39■■□□□ 1.98
PLOD3-213ENST00000478264 MLECQ14165 292 aa27.35■■□□□ 1.97
PLOD3-213ENST00000478264 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
PLOD3-213ENST00000478264 ADAMTSL3P82987 1691 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms