RNA–Protein interactions for RNA: ENST00000478027.2

RPSA-207, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 1,227 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-207ENST00000478027 TIAM1Q13009 1591 aa18.33■□□□□ 0.52
RPSA-207ENST00000478027 FRMPD1Q5SYB0 1578 aa18.33■□□□□ 0.52
RPSA-207ENST00000478027 MTUS2Q5JR59 1369 aa18.32■□□□□ 0.52
RPSA-207ENST00000478027 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
RPSA-207ENST00000478027 MAP3K1Q13233 1512 aa18.29■□□□□ 0.52
RPSA-207ENST00000478027 DENND4BO75064 1496 aaPredicted RBP18.29■□□□□ 0.52
RPSA-207ENST00000478027 ADGRL1O94910 1474 aa18.29■□□□□ 0.52
RPSA-207ENST00000478027 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
RPSA-207ENST00000478027 SUPT6HQ7KZ85 1726 aaKnown RBP18.27■□□□□ 0.52
RPSA-207ENST00000478027 RAPGEF3O95398 923 aa18.26■□□□□ 0.51
RPSA-207ENST00000478027 ZMYM4Q5VZL5 1548 aa18.26■□□□□ 0.51
RPSA-207ENST00000478027 ITSN2Q9NZM3 1697 aa18.25■□□□□ 0.51
RPSA-207ENST00000478027 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
RPSA-207ENST00000478027 GPATCH8Q9UKJ3 1502 aaKnown RBP18.24■□□□□ 0.51
RPSA-207ENST00000478027 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
RPSA-207ENST00000478027 LRRC9Q6ZRR7 1453 aa18.23■□□□□ 0.51
RPSA-207ENST00000478027 KDM4FA0A1W2PPD8 638 aa18.23■□□□□ 0.51
RPSA-207ENST00000478027 ABCC1P33527 1531 aa18.23■□□□□ 0.51
RPSA-207ENST00000478027 CCNB3Q8WWL7 1395 aa18.21■□□□□ 0.51
RPSA-207ENST00000478027 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
RPSA-207ENST00000478027 SAMD9LQ8IVG5 1584 aa18.2■□□□□ 0.5
RPSA-207ENST00000478027 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
RPSA-207ENST00000478027 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
RPSA-207ENST00000478027 KDM5CP41229 1560 aa18.19■□□□□ 0.5
RPSA-207ENST00000478027 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
RPSA-207ENST00000478027 ZFYVE16Q7Z3T8 1539 aa18.17■□□□□ 0.5
RPSA-207ENST00000478027 ARHGEF12Q9NZN5 1544 aa18.16■□□□□ 0.5
RPSA-207ENST00000478027 CFDP1Q9UEE9 299 aaPredicted RBP18.15■□□□□ 0.5
RPSA-207ENST00000478027 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.5
RPSA-207ENST00000478027 SYCP2Q9BX26 1530 aa18.14■□□□□ 0.49
RPSA-207ENST00000478027 HECW2Q9P2P5 1572 aa18.14■□□□□ 0.49
RPSA-207ENST00000478027 APLP2Q06481 763 aa18.13■□□□□ 0.49
RPSA-207ENST00000478027 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
RPSA-207ENST00000478027 KIAA1107Q9UPP5 1409 aa18.13■□□□□ 0.49
RPSA-207ENST00000478027 YEATS2Q9ULM3 1422 aa18.12■□□□□ 0.49
RPSA-207ENST00000478027 TRAPPC8Q9Y2L5 1435 aa18.12■□□□□ 0.49
RPSA-207ENST00000478027 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
RPSA-207ENST00000478027 MLH3Q9UHC1 1453 aa18.1■□□□□ 0.49
RPSA-207ENST00000478027 AFAP1Q8N556 730 aa18.1■□□□□ 0.49
RPSA-207ENST00000478027 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
RPSA-207ENST00000478027 SIGLEC1Q9BZZ2 1709 aa18.08■□□□□ 0.48
RPSA-207ENST00000478027 BCORL1Q5H9F3 1711 aa18.07■□□□□ 0.48
RPSA-207ENST00000478027 ABCA6Q8N139 1617 aa18.07■□□□□ 0.48
RPSA-207ENST00000478027 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
RPSA-207ENST00000478027 ATP10AO60312 1499 aa18.07■□□□□ 0.48
RPSA-207ENST00000478027 CAMSAP2Q08AD1 1489 aa18.06■□□□□ 0.48
RPSA-207ENST00000478027 ADAMTSL3P82987 1691 aa18.06■□□□□ 0.48
RPSA-207ENST00000478027 REREQ9P2R6 1566 aa18.05■□□□□ 0.48
RPSA-207ENST00000478027 MBD5Q9P267 1494 aa18.05■□□□□ 0.48
RPSA-207ENST00000478027 MYOM3Q5VTT5 1437 aa18.05■□□□□ 0.48
RPSA-207ENST00000478027 C9orf84Q5VXU9 1444 aa18.05■□□□□ 0.48
RPSA-207ENST00000478027 INO80Q9ULG1 1556 aaPredicted RBP18.04■□□□□ 0.48
RPSA-207ENST00000478027 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
RPSA-207ENST00000478027 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
RPSA-207ENST00000478027 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
RPSA-207ENST00000478027 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
RPSA-207ENST00000478027 ARHGEF5Q12774 1597 aa18.02■□□□□ 0.48
RPSA-207ENST00000478027 SPAG9O60271 1321 aaKnown RBP17.99■□□□□ 0.47
RPSA-207ENST00000478027 ARID4BQ4LE39 1312 aaPredicted RBP17.99■□□□□ 0.47
RPSA-207ENST00000478027 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
RPSA-207ENST00000478027 CCDC141Q6ZP82 1450 aa17.99■□□□□ 0.47
RPSA-207ENST00000478027 ADGBQ8N7X0 1667 aa17.98■□□□□ 0.47
RPSA-207ENST00000478027 MADDQ8WXG6 1647 aa17.98■□□□□ 0.47
RPSA-207ENST00000478027 RSPH4AQ5TD94 716 aa17.97■□□□□ 0.47
RPSA-207ENST00000478027 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
RPSA-207ENST00000478027 AGLP35573 1532 aa17.97■□□□□ 0.47
RPSA-207ENST00000478027 RTEL1-TNFRSF6BF6WH68 1400 aa17.97■□□□□ 0.47
RPSA-207ENST00000478027 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.47
RPSA-207ENST00000478027 FGD6Q6ZV73 1430 aa17.94■□□□□ 0.46
RPSA-207ENST00000478027 PLXNC1O60486 1568 aa17.94■□□□□ 0.46
RPSA-207ENST00000478027 RIMS1Q86UR5 1692 aaKnown RBP17.93■□□□□ 0.46
RPSA-207ENST00000478027 TCOF1Q13428 1488 aaKnown RBP17.93■□□□□ 0.46
RPSA-207ENST00000478027 CROCC2H7BZ55 1655 aa17.93■□□□□ 0.46
RPSA-207ENST00000478027 MAST1Q9Y2H9 1570 aa17.92■□□□□ 0.46
RPSA-207ENST00000478027 A2MP01023 1474 aa17.9■□□□□ 0.46
RPSA-207ENST00000478027 PTPRMP28827 1452 aa17.9■□□□□ 0.46
RPSA-207ENST00000478027 DNMT1P26358 1616 aaKnown RBP17.89■□□□□ 0.45
RPSA-207ENST00000478027 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
RPSA-207ENST00000478027 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
RPSA-207ENST00000478027 MLECQ14165 292 aa17.86■□□□□ 0.45
RPSA-207ENST00000478027 SHANK2Q9UPX8 1470 aa17.86■□□□□ 0.45
RPSA-207ENST00000478027 ABCC5O15440 1437 aa17.83■□□□□ 0.45
RPSA-207ENST00000478027 DAPK1P53355 1430 aa17.83■□□□□ 0.45
RPSA-207ENST00000478027 DHX29Q7Z478 1369 aaKnown RBP17.83■□□□□ 0.45
RPSA-207ENST00000478027 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
RPSA-207ENST00000478027 EIF2AK4Q9P2K8 1649 aaKnown RBP17.8■□□□□ 0.44
RPSA-207ENST00000478027 C3P01024 1663 aa17.79■□□□□ 0.44
RPSA-207ENST00000478027 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
RPSA-207ENST00000478027 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.44
RPSA-207ENST00000478027 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.43
RPSA-207ENST00000478027 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.43
RPSA-207ENST00000478027 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
RPSA-207ENST00000478027 RNF17Q9BXT8 1623 aaKnown RBP17.76■□□□□ 0.43
RPSA-207ENST00000478027 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
RPSA-207ENST00000478027 SETD1BQ9UPS6 1966 aaKnown RBP17.75■□□□□ 0.43
RPSA-207ENST00000478027 ESF1Q9H501 851 aaKnown RBP17.74■□□□□ 0.43
RPSA-207ENST00000478027 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
RPSA-207ENST00000478027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.74■□□□□ 0.43not detected■■■□□ 15.5
RPSA-207ENST00000478027 ADGRL2O95490 1459 aa17.74■□□□□ 0.43
RPSA-207ENST00000478027 KIF15Q9NS87 1388 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms