RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 ARSIQ5FYB1 569 aa13.06□□□□□ -0.32
NCKAP1-204ENST00000477988 PHF8Q9UPP1 1060 aa13.04□□□□□ -0.32
NCKAP1-204ENST00000477988 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.33
NCKAP1-204ENST00000477988 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
NCKAP1-204ENST00000477988 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
NCKAP1-204ENST00000477988 RNF25Q96BH1 459 aaPredicted RBP13.01□□□□□ -0.33
NCKAP1-204ENST00000477988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
NCKAP1-204ENST00000477988 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
NCKAP1-204ENST00000477988 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.332e-10■■□□□ 11.5
NCKAP1-204ENST00000477988 LSM11P83369 360 aaKnown RBP eCLIP12.98□□□□□ -0.33
NCKAP1-204ENST00000477988 VGFO15240 615 aaPredicted RBP12.96□□□□□ -0.33
NCKAP1-204ENST00000477988 FBXO22Q8NEZ5 403 aa12.91□□□□□ -0.34
NCKAP1-204ENST00000477988 KIF3CO14782 793 aa12.89□□□□□ -0.35
NCKAP1-204ENST00000477988 PBX2P40425 430 aa12.89□□□□□ -0.35
NCKAP1-204ENST00000477988 NLRP6P59044 892 aa12.89□□□□□ -0.35
NCKAP1-204ENST00000477988 POTEEQ6S8J3 1075 aa12.88□□□□□ -0.35
NCKAP1-204ENST00000477988 NUDT7P0C024 238 aa12.84□□□□□ -0.35
NCKAP1-204ENST00000477988 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
NCKAP1-204ENST00000477988 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
NCKAP1-204ENST00000477988 SLC34A2O95436 690 aa12.81□□□□□ -0.36
NCKAP1-204ENST00000477988 MFRPQ9BY79 579 aa12.8□□□□□ -0.36
NCKAP1-204ENST00000477988 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
NCKAP1-204ENST00000477988 AXIN2Q9Y2T1 843 aa12.8□□□□□ -0.36
NCKAP1-204ENST00000477988 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
NCKAP1-204ENST00000477988 HCSTQ9UBK5 93 aa12.78□□□□□ -0.36
NCKAP1-204ENST00000477988 PCDHGA4Q9Y5G9 962 aa12.78□□□□□ -0.36
NCKAP1-204ENST00000477988 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
NCKAP1-204ENST00000477988 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
NCKAP1-204ENST00000477988 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
NCKAP1-204ENST00000477988 ARHGAP33O14559 1287 aa12.7□□□□□ -0.38
NCKAP1-204ENST00000477988 KDM4FA0A1W2PPD8 638 aa12.66□□□□□ -0.38
NCKAP1-204ENST00000477988 PSDA5PKW4 1024 aaPredicted RBP12.65□□□□□ -0.38
NCKAP1-204ENST00000477988 TK2O00142 265 aa12.65□□□□□ -0.38
NCKAP1-204ENST00000477988 HRO43593 1189 aa12.65□□□□□ -0.38
NCKAP1-204ENST00000477988 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
NCKAP1-204ENST00000477988 STK25O00506 426 aa12.62□□□□□ -0.39
NCKAP1-204ENST00000477988 DMRTA1Q5VZB9 504 aa12.6□□□□□ -0.39
NCKAP1-204ENST00000477988 PTCD2Q8WV60 388 aaKnown RBP12.58□□□□□ -0.4
NCKAP1-204ENST00000477988 PSEN2P49810 448 aa12.57□□□□□ -0.4
NCKAP1-204ENST00000477988 PPP1R37O75864 691 aa12.53□□□□□ -0.4
NCKAP1-204ENST00000477988 KCTD12Q96CX2 325 aaKnown RBP12.52□□□□□ -0.41
NCKAP1-204ENST00000477988 FOXK1P85037 733 aa12.48□□□□□ -0.41
NCKAP1-204ENST00000477988 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
NCKAP1-204ENST00000477988 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
NCKAP1-204ENST00000477988 PLPP6Q8IY26 295 aa12.44□□□□□ -0.42
NCKAP1-204ENST00000477988 RGS20O76081 388 aa12.43□□□□□ -0.42
NCKAP1-204ENST00000477988 IFFO2Q5TF58 517 aa12.43□□□□□ -0.42
NCKAP1-204ENST00000477988 STAC3Q96MF2 364 aa12.43□□□□□ -0.42
NCKAP1-204ENST00000477988 RGL2O15211 777 aa12.41□□□□□ -0.42
NCKAP1-204ENST00000477988 GPHNQ9NQX3 736 aaPredicted RBP12.41□□□□□ -0.42
NCKAP1-204ENST00000477988 VPS9D1Q9Y2B5 631 aa12.41□□□□□ -0.42
NCKAP1-204ENST00000477988 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
NCKAP1-204ENST00000477988 TBC1D12O60347 775 aa12.39□□□□□ -0.43
NCKAP1-204ENST00000477988 DSG2Q14126 1118 aa12.37□□□□□ -0.43
NCKAP1-204ENST00000477988 PTPN5P54829 565 aa12.36□□□□□ -0.43
NCKAP1-204ENST00000477988 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
NCKAP1-204ENST00000477988 SLC4A5Q9BY07 1137 aa12.36□□□□□ -0.43
NCKAP1-204ENST00000477988 PKD2Q13563 968 aa12.35□□□□□ -0.43
NCKAP1-204ENST00000477988 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
NCKAP1-204ENST00000477988 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
NCKAP1-204ENST00000477988 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
NCKAP1-204ENST00000477988 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
NCKAP1-204ENST00000477988 A0A0G2JS52 829 aa12.3□□□□□ -0.44
NCKAP1-204ENST00000477988 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
NCKAP1-204ENST00000477988 ZNF454Q8N9F8 522 aa12.26□□□□□ -0.45
NCKAP1-204ENST00000477988 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
NCKAP1-204ENST00000477988 FOSBP53539 338 aa12.23□□□□□ -0.45
NCKAP1-204ENST00000477988 WNT2BQ93097 391 aa12.22□□□□□ -0.45
NCKAP1-204ENST00000477988 PTPREP23469 700 aa12.21□□□□□ -0.45
NCKAP1-204ENST00000477988 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
NCKAP1-204ENST00000477988 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
NCKAP1-204ENST00000477988 GOLGA8CPA6NN73 597 aa12.18□□□□□ -0.46
NCKAP1-204ENST00000477988 HS6ST3Q8IZP7 471 aa12.17□□□□□ -0.46
NCKAP1-204ENST00000477988 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
NCKAP1-204ENST00000477988 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
NCKAP1-204ENST00000477988 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
NCKAP1-204ENST00000477988 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
NCKAP1-204ENST00000477988 PPP1R15BQ5SWA1 713 aa12.12□□□□□ -0.47
NCKAP1-204ENST00000477988 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
NCKAP1-204ENST00000477988 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
NCKAP1-204ENST00000477988 ADAM33Q9BZ11 813 aa12.11□□□□□ -0.47
NCKAP1-204ENST00000477988 EVI5O60447 810 aa12.07□□□□□ -0.48
NCKAP1-204ENST00000477988 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
NCKAP1-204ENST00000477988 RABGEF1Q9UJ41 708 aa12.04□□□□□ -0.48
NCKAP1-204ENST00000477988 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
NCKAP1-204ENST00000477988 NKX1-1Q15270 411 aaPredicted RBP12.03□□□□□ -0.48
NCKAP1-204ENST00000477988 PPP1R3GB7ZBB8 358 aa12.02□□□□□ -0.49
NCKAP1-204ENST00000477988 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.49
NCKAP1-204ENST00000477988 Q6ZNB5 142 aa12.01□□□□□ -0.49
NCKAP1-204ENST00000477988 PDE4AP27815 886 aa12□□□□□ -0.49
NCKAP1-204ENST00000477988 PROX2Q3B8N5 592 aa11.99□□□□□ -0.49
NCKAP1-204ENST00000477988 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
NCKAP1-204ENST00000477988 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
NCKAP1-204ENST00000477988 SOWAHBA6NEL2 793 aa11.97□□□□□ -0.49
NCKAP1-204ENST00000477988 BCAMP50895 628 aa11.97□□□□□ -0.49
NCKAP1-204ENST00000477988 NYAP1Q6ZVC0 841 aa11.97□□□□□ -0.49
NCKAP1-204ENST00000477988 LAPTM4BQ86VI4 370 aa11.97□□□□□ -0.49
NCKAP1-204ENST00000477988 COL9A1P20849 921 aa11.96□□□□□ -0.49
NCKAP1-204ENST00000477988 PCDHGA10Q9Y5H3 936 aa11.96□□□□□ -0.49
NCKAP1-204ENST00000477988 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms