RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 KIF14Q15058 1648 aa13.81□□□□□ -0.2
CD40-205ENST00000477696 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
CD40-205ENST00000477696 PTPRMP28827 1452 aa13.8□□□□□ -0.2
CD40-205ENST00000477696 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
CD40-205ENST00000477696 RIMS1Q86UR5 1692 aaKnown RBP13.79□□□□□ -0.2
CD40-205ENST00000477696 RAPGEF3O95398 923 aa13.79□□□□□ -0.2
CD40-205ENST00000477696 TROQ12816 1431 aaPredicted RBP13.78□□□□□ -0.2
CD40-205ENST00000477696 ZFYVE16Q7Z3T8 1539 aa13.78□□□□□ -0.2
CD40-205ENST00000477696 PCF11O94913 1555 aaKnown RBP13.78□□□□□ -0.2
CD40-205ENST00000477696 CEP162Q5TB80 1403 aa13.77□□□□□ -0.21
CD40-205ENST00000477696 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.21
CD40-205ENST00000477696 PLCH2O75038 1416 aa13.76□□□□□ -0.21
CD40-205ENST00000477696 POGZQ7Z3K3 1410 aa13.76□□□□□ -0.21
CD40-205ENST00000477696 FER1L4A9Z1Z3 1794 aa13.76□□□□□ -0.21
CD40-205ENST00000477696 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
CD40-205ENST00000477696 LOC105371045A0A1W2PR82 267 aa13.74□□□□□ -0.21
CD40-205ENST00000477696 PREX2Q70Z35 1606 aa13.74□□□□□ -0.21
CD40-205ENST00000477696 KDM5CP41229 1560 aa13.74□□□□□ -0.21
CD40-205ENST00000477696 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
CD40-205ENST00000477696 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
CD40-205ENST00000477696 CDC42BPAQ5VT25 1732 aa13.71□□□□□ -0.21
CD40-205ENST00000477696 ITSN2Q9NZM3 1697 aa13.71□□□□□ -0.21
CD40-205ENST00000477696 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
CD40-205ENST00000477696 REREQ9P2R6 1566 aa13.7□□□□□ -0.22
CD40-205ENST00000477696 SCAPERQ9BY12 1400 aa13.69□□□□□ -0.22
CD40-205ENST00000477696 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
CD40-205ENST00000477696 ABCC1P33527 1531 aa13.68□□□□□ -0.22
CD40-205ENST00000477696 ARHGAP5Q13017 1502 aa13.68□□□□□ -0.22
CD40-205ENST00000477696 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
CD40-205ENST00000477696 DIP2CQ9Y2E4 1556 aa13.67□□□□□ -0.22
CD40-205ENST00000477696 ABCA6Q8N139 1617 aa13.67□□□□□ -0.22
CD40-205ENST00000477696 C9orf84Q5VXU9 1444 aa13.66□□□□□ -0.22
CD40-205ENST00000477696 MTUS2Q5JR59 1369 aa13.66□□□□□ -0.22
CD40-205ENST00000477696 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
CD40-205ENST00000477696 ATP10AO60312 1499 aa13.64□□□□□ -0.23
CD40-205ENST00000477696 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
CD40-205ENST00000477696 ARID4BQ4LE39 1312 aaPredicted RBP13.63□□□□□ -0.23
CD40-205ENST00000477696 KIDINS220Q9ULH0 1771 aa13.62□□□□□ -0.23
CD40-205ENST00000477696 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
CD40-205ENST00000477696 CCNB3Q8WWL7 1395 aa13.6□□□□□ -0.23
CD40-205ENST00000477696 EHBP1L1Q8N3D4 1523 aa13.6□□□□□ -0.23
CD40-205ENST00000477696 SAMD9LQ8IVG5 1584 aa13.6□□□□□ -0.23
CD40-205ENST00000477696 FBXO41Q8TF61 875 aa13.59□□□□□ -0.23
CD40-205ENST00000477696 AGLP35573 1532 aa13.59□□□□□ -0.23
CD40-205ENST00000477696 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
CD40-205ENST00000477696 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
CD40-205ENST00000477696 C3P01024 1663 aa13.58□□□□□ -0.24
CD40-205ENST00000477696 ZNF777Q9ULD5 760 aaPredicted RBP13.57□□□□□ -0.24
CD40-205ENST00000477696 PLEKHH2Q8IVE3 1493 aa13.56□□□□□ -0.24
CD40-205ENST00000477696 AFAP1Q8N556 730 aa13.56□□□□□ -0.24
CD40-205ENST00000477696 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
CD40-205ENST00000477696 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
CD40-205ENST00000477696 INO80Q9ULG1 1556 aaPredicted RBP13.56□□□□□ -0.24
CD40-205ENST00000477696 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
CD40-205ENST00000477696 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
CD40-205ENST00000477696 APLP2Q06481 763 aa13.55□□□□□ -0.24
CD40-205ENST00000477696 MROH2AA6NES4 1674 aa13.55□□□□□ -0.24
CD40-205ENST00000477696 SUPT6HQ7KZ85 1726 aaKnown RBP13.55□□□□□ -0.24
CD40-205ENST00000477696 SYCP2Q9BX26 1530 aa13.54□□□□□ -0.24
CD40-205ENST00000477696 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
CD40-205ENST00000477696 STRCQ7RTU9 1775 aa13.53□□□□□ -0.24
CD40-205ENST00000477696 SETD1BQ9UPS6 1966 aaKnown RBP13.53□□□□□ -0.24
CD40-205ENST00000477696 PLXNC1O60486 1568 aa13.53□□□□□ -0.24
CD40-205ENST00000477696 LRRC9Q6ZRR7 1453 aa13.52□□□□□ -0.25
CD40-205ENST00000477696 NCOA2Q15596 1464 aa13.51□□□□□ -0.25
CD40-205ENST00000477696 ATP7AQ04656 1500 aa13.5□□□□□ -0.25
CD40-205ENST00000477696 HNRNPMP52272 730 aaKnown RBP eCLIP13.5□□□□□ -0.25
CD40-205ENST00000477696 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
CD40-205ENST00000477696 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
CD40-205ENST00000477696 MLECQ14165 292 aa13.49□□□□□ -0.25
CD40-205ENST00000477696 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
CD40-205ENST00000477696 HSPA2P54652 639 aa13.46□□□□□ -0.25
CD40-205ENST00000477696 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
CD40-205ENST00000477696 CLTCQ00610 1675 aaKnown RBP13.45□□□□□ -0.26
CD40-205ENST00000477696 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
CD40-205ENST00000477696 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
CD40-205ENST00000477696 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
CD40-205ENST00000477696 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
CD40-205ENST00000477696 MYO3AQ8NEV4 1616 aa13.42□□□□□ -0.26
CD40-205ENST00000477696 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
CD40-205ENST00000477696 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
CD40-205ENST00000477696 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
CD40-205ENST00000477696 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
CD40-205ENST00000477696 MIA2Q96PC5 1412 aa13.41□□□□□ -0.26
CD40-205ENST00000477696 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
CD40-205ENST00000477696 A2MP01023 1474 aa13.41□□□□□ -0.26
CD40-205ENST00000477696 NPATQ14207 1427 aa13.4□□□□□ -0.26
CD40-205ENST00000477696 MYOM3Q5VTT5 1437 aa13.4□□□□□ -0.26
CD40-205ENST00000477696 TSPY4P0CV99 314 aa13.4□□□□□ -0.26
CD40-205ENST00000477696 TSPY10P0CW01 314 aa13.4□□□□□ -0.26
CD40-205ENST00000477696 CEBPAP49715 358 aaPredicted RBP13.4□□□□□ -0.26
CD40-205ENST00000477696 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
CD40-205ENST00000477696 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
CD40-205ENST00000477696 FAM135AQ9P2D6 1515 aa13.37□□□□□ -0.27
CD40-205ENST00000477696 PTPRTO14522 1441 aa13.37□□□□□ -0.27
CD40-205ENST00000477696 NCOA1Q15788 1441 aa13.36□□□□□ -0.27
CD40-205ENST00000477696 CEP170BQ9Y4F5 1589 aaPredicted RBP13.36□□□□□ -0.27
CD40-205ENST00000477696 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
CD40-205ENST00000477696 CAMSAP1Q5T5Y3 1602 aa13.35□□□□□ -0.27
CD40-205ENST00000477696 LTBP4Q8N2S1 1624 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms