RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 MAGI3Q5TCQ9 1506 aa6.49□□□□□ -1.37
RGPD5-209ENST00000477523 SPAG9O60271 1321 aaKnown RBP6.49□□□□□ -1.37
RGPD5-209ENST00000477523 ABCA8O94911 1581 aa6.48□□□□□ -1.37
RGPD5-209ENST00000477523 MPHOSPH9Q99550 1183 aa6.48□□□□□ -1.37
RGPD5-209ENST00000477523 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
RGPD5-209ENST00000477523 NAIPQ13075 1403 aa6.48□□□□□ -1.37
RGPD5-209ENST00000477523 ARHGAP5Q13017 1502 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 TCOF1Q13428 1488 aaKnown RBP6.47□□□□□ -1.37
RGPD5-209ENST00000477523 NUP155O75694 1391 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 ROCK1Q13464 1354 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 ZNF326Q5BKZ1 582 aaKnown RBP6.47□□□□□ -1.37
RGPD5-209ENST00000477523 ABCC5O15440 1437 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 CAMSAP2Q08AD1 1489 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 KIF15Q9NS87 1388 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 KIF14Q15058 1648 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 PTPRKQ15262 1439 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 ANKRD50Q9ULJ7 1429 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 CHD1O14646 1710 aa6.47□□□□□ -1.37
RGPD5-209ENST00000477523 DIEXFQ68CQ4 756 aaKnown RBP6.47□□□□□ -1.37
RGPD5-209ENST00000477523 CLASP1Q7Z460 1538 aa6.46□□□□□ -1.37
RGPD5-209ENST00000477523 UHRF1BP1LA0JNW5 1464 aa6.46□□□□□ -1.37
RGPD5-209ENST00000477523 PKD2Q13563 968 aa6.46□□□□□ -1.37
RGPD5-209ENST00000477523 PTPN23Q9H3S7 1636 aa6.46□□□□□ -1.38
RGPD5-209ENST00000477523 AKNAQ7Z591 1439 aa6.46□□□□□ -1.38
RGPD5-209ENST00000477523 C9orf84Q5VXU9 1444 aa6.46□□□□□ -1.38
RGPD5-209ENST00000477523 ERCC6L2Q5T890 1561 aa6.46□□□□□ -1.38
RGPD5-209ENST00000477523 AFAP1Q8N556 730 aa6.45□□□□□ -1.38
RGPD5-209ENST00000477523 KDM5BQ9UGL1 1544 aa6.45□□□□□ -1.38
RGPD5-209ENST00000477523 PLCH2O75038 1416 aa6.44□□□□□ -1.38
RGPD5-209ENST00000477523 ASXL2Q76L83 1435 aa6.44□□□□□ -1.38
RGPD5-209ENST00000477523 CCDC141Q6ZP82 1450 aa6.44□□□□□ -1.38
RGPD5-209ENST00000477523 FOXD1Q16676 465 aa6.44□□□□□ -1.38
RGPD5-209ENST00000477523 WDR7Q9Y4E6 1490 aa6.44□□□□□ -1.38
RGPD5-209ENST00000477523 FAM69CQ0P6D2 419 aa6.44□□□□□ -1.38
RGPD5-209ENST00000477523 NCOA1Q15788 1441 aa6.44□□□□□ -1.38
RGPD5-209ENST00000477523 ABCC10Q5T3U5 1492 aa6.43□□□□□ -1.38
RGPD5-209ENST00000477523 KANK1Q14678 1352 aa6.43□□□□□ -1.38
RGPD5-209ENST00000477523 KIF3BO15066 747 aa6.43□□□□□ -1.38
RGPD5-209ENST00000477523 SCAPERQ9BY12 1400 aa6.43□□□□□ -1.38
RGPD5-209ENST00000477523 KIAA1107Q9UPP5 1409 aa6.42□□□□□ -1.38
RGPD5-209ENST00000477523 PPP1R15AO75807 674 aaPredicted RBP6.42□□□□□ -1.38
RGPD5-209ENST00000477523 CD109Q6YHK3 1445 aa6.42□□□□□ -1.38
RGPD5-209ENST00000477523 SHROOM2Q13796 1616 aa6.42□□□□□ -1.38
RGPD5-209ENST00000477523 ESF1Q9H501 851 aaKnown RBP6.41□□□□□ -1.38
RGPD5-209ENST00000477523 GGT6Q6P531 493 aa6.4□□□□□ -1.38
RGPD5-209ENST00000477523 FANCAO15360 1455 aa6.4□□□□□ -1.38
RGPD5-209ENST00000477523 ADGRL1O94910 1474 aa6.4□□□□□ -1.38
RGPD5-209ENST00000477523 SHANK2Q9UPX8 1470 aa6.39□□□□□ -1.39
RGPD5-209ENST00000477523 L3MBTL2Q969R5 705 aa6.39□□□□□ -1.39
RGPD5-209ENST00000477523 KDM2AQ9Y2K7 1162 aa6.39□□□□□ -1.39
RGPD5-209ENST00000477523 TRHP20396 242 aaPredicted RBP6.39□□□□□ -1.39
RGPD5-209ENST00000477523 RGL3Q3MIN7 710 aa6.39□□□□□ -1.39
RGPD5-209ENST00000477523 POLR3GLQ9BT43 218 aa6.39□□□□□ -1.39
RGPD5-209ENST00000477523 CHGAP10645 457 aaKnown RBP6.39□□□□□ -1.39
RGPD5-209ENST00000477523 ITSN2Q9NZM3 1697 aa6.39□□□□□ -1.39
RGPD5-209ENST00000477523 EIF4G2P78344 907 aaKnown RBP eCLIP6.38□□□□□ -1.39
RGPD5-209ENST00000477523 SYCP2Q9BX26 1530 aa6.38□□□□□ -1.39
RGPD5-209ENST00000477523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.38□□□□□ -1.39
RGPD5-209ENST00000477523 MBD5Q9P267 1494 aa6.38□□□□□ -1.39
RGPD5-209ENST00000477523 RAPGEF3O95398 923 aa6.37□□□□□ -1.39
RGPD5-209ENST00000477523 ADGRL2O95490 1459 aa6.37□□□□□ -1.39
RGPD5-209ENST00000477523 TRAPPC8Q9Y2L5 1435 aa6.37□□□□□ -1.39
RGPD5-209ENST00000477523 CCDC144AA2RUR9 1427 aa6.37□□□□□ -1.39
RGPD5-209ENST00000477523 DNMT1P26358 1616 aaKnown RBP6.36□□□□□ -1.39
RGPD5-209ENST00000477523 DCAF11Q8TEB1 546 aa6.36□□□□□ -1.39
RGPD5-209ENST00000477523 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
RGPD5-209ENST00000477523 CENPBP07199 599 aaPredicted RBP6.36□□□□□ -1.39
RGPD5-209ENST00000477523 WASHC2CQ9Y4E1 1318 aa6.36□□□□□ -1.39
RGPD5-209ENST00000477523 ARID4BQ4LE39 1312 aaPredicted RBP6.35□□□□□ -1.39
RGPD5-209ENST00000477523 DENND4BO75064 1496 aaPredicted RBP6.35□□□□□ -1.39
RGPD5-209ENST00000477523 MAPKBP1O60336 1514 aa6.35□□□□□ -1.39
RGPD5-209ENST00000477523 ANKRD30BQ9BXX2 1392 aa6.35□□□□□ -1.39
RGPD5-209ENST00000477523 DDX10Q13206 875 aaKnown RBP6.35□□□□□ -1.39
RGPD5-209ENST00000477523 YTHDC1Q96MU7 727 aaKnown RBP6.35□□□□□ -1.39
RGPD5-209ENST00000477523 STAG3Q9UJ98 1225 aa6.35□□□□□ -1.39
RGPD5-209ENST00000477523 DHX29Q7Z478 1369 aaKnown RBP6.34□□□□□ -1.39
RGPD5-209ENST00000477523 CARD11Q9BXL7 1154 aa6.34□□□□□ -1.39
RGPD5-209ENST00000477523 RTEL1-TNFRSF6BF6WH68 1400 aa6.34□□□□□ -1.39
RGPD5-209ENST00000477523 ADCY10Q96PN6 1610 aa6.34□□□□□ -1.39
RGPD5-209ENST00000477523 TTC37Q6PGP7 1564 aa6.34□□□□□ -1.39
RGPD5-209ENST00000477523 MLECQ14165 292 aa6.34□□□□□ -1.39
RGPD5-209ENST00000477523 ZCCHC11Q5TAX3 1644 aaKnown RBP6.34□□□□□ -1.4
RGPD5-209ENST00000477523 ZNF518AQ6AHZ1 1483 aa6.34□□□□□ -1.4
RGPD5-209ENST00000477523 ANP32CO43423 234 aa6.33□□□□□ -1.4
RGPD5-209ENST00000477523 ARHGEF5Q12774 1597 aa6.33□□□□□ -1.4
RGPD5-209ENST00000477523 ARAP3Q8WWN8 1544 aa6.33□□□□□ -1.4
RGPD5-209ENST00000477523 ERBINQ96RT1 1412 aa6.33□□□□□ -1.4
RGPD5-209ENST00000477523 HSPA5P11021 654 aaKnown RBP6.32□□□□□ -1.4
RGPD5-209ENST00000477523 NEO1Q92859 1461 aa6.32□□□□□ -1.4
RGPD5-209ENST00000477523 SAMD9LQ8IVG5 1584 aa6.32□□□□□ -1.4
RGPD5-209ENST00000477523 DUOX2Q9NRD8 1548 aa6.32□□□□□ -1.4
RGPD5-209ENST00000477523 TEX14Q8IWB6 1497 aa6.32□□□□□ -1.4
RGPD5-209ENST00000477523 LRRIQ1Q96JM4 1722 aa6.31□□□□□ -1.4
RGPD5-209ENST00000477523 ARHGEF12Q9NZN5 1544 aa6.31□□□□□ -1.4
RGPD5-209ENST00000477523 POGZQ7Z3K3 1410 aa6.31□□□□□ -1.4
RGPD5-209ENST00000477523 PREX2Q70Z35 1606 aa6.31□□□□□ -1.4
RGPD5-209ENST00000477523 RPRD2Q5VT52 1461 aaKnown RBP6.3□□□□□ -1.4
RGPD5-209ENST00000477523 ABCC1P33527 1531 aa6.3□□□□□ -1.4
RGPD5-209ENST00000477523 PZPP20742 1482 aa6.3□□□□□ -1.4
RGPD5-209ENST00000477523 MIER1Q8N108 512 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms