RNA–Protein interactions for RNA: ENST00000477342.1

PEX1-207, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-207ENST00000477342 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
PEX1-207ENST00000477342 POTEB3A0JP26 581 aa12.94□□□□□ -0.34
PEX1-207ENST00000477342 POTEBQ6S5H4 581 aa12.94□□□□□ -0.34
PEX1-207ENST00000477342 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
PEX1-207ENST00000477342 HOXB3P14651 431 aaPredicted RBP12.93□□□□□ -0.34
PEX1-207ENST00000477342 SPNS2Q8IVW8 549 aa12.93□□□□□ -0.34
PEX1-207ENST00000477342 FAM205CA6NFA0 338 aa12.91□□□□□ -0.34
PEX1-207ENST00000477342 HS3ST6Q96QI5 342 aa12.91□□□□□ -0.34
PEX1-207ENST00000477342 MMRN1Q13201 1228 aa12.9□□□□□ -0.34
PEX1-207ENST00000477342 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
PEX1-207ENST00000477342 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
PEX1-207ENST00000477342 SOX12O15370 315 aa12.87□□□□□ -0.35
PEX1-207ENST00000477342 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
PEX1-207ENST00000477342 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
PEX1-207ENST00000477342 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
PEX1-207ENST00000477342 KRTAP3-2Q9BYR7 98 aa12.86□□□□□ -0.35
PEX1-207ENST00000477342 RYDENQ9NUL5 291 aaKnown RBP12.86□□□□□ -0.35
PEX1-207ENST00000477342 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
PEX1-207ENST00000477342 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
PEX1-207ENST00000477342 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
PEX1-207ENST00000477342 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
PEX1-207ENST00000477342 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
PEX1-207ENST00000477342 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
PEX1-207ENST00000477342 NLRP6P59044 892 aa12.74□□□□□ -0.37
PEX1-207ENST00000477342 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
PEX1-207ENST00000477342 ERBB3P21860 1342 aa12.72□□□□□ -0.37
PEX1-207ENST00000477342 RIMBP2O15034 1052 aa12.71□□□□□ -0.37
PEX1-207ENST00000477342 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
PEX1-207ENST00000477342 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
PEX1-207ENST00000477342 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
PEX1-207ENST00000477342 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
PEX1-207ENST00000477342 ZSWIM6Q9HCJ5 1215 aa12.65□□□□□ -0.38
PEX1-207ENST00000477342 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
PEX1-207ENST00000477342 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
PEX1-207ENST00000477342 KHSRPQ92945 711 aaKnown RBP eCLIP12.56□□□□□ -0.4
PEX1-207ENST00000477342 KIF3CO14782 793 aa12.54□□□□□ -0.4
PEX1-207ENST00000477342 PPP1R37O75864 691 aa12.54□□□□□ -0.4
PEX1-207ENST00000477342 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
PEX1-207ENST00000477342 BCANQ96GW7 911 aa12.5□□□□□ -0.41
PEX1-207ENST00000477342 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
PEX1-207ENST00000477342 CADPS2Q86UW7 1296 aa12.48□□□□□ -0.41
PEX1-207ENST00000477342 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
PEX1-207ENST00000477342 MYT1LQ9UL68 1186 aa12.44□□□□□ -0.42
PEX1-207ENST00000477342 NUDT7P0C024 238 aa12.43□□□□□ -0.42
PEX1-207ENST00000477342 TMC2Q8TDI7 906 aa12.4□□□□□ -0.42
PEX1-207ENST00000477342 PCDHGA4Q9Y5G9 962 aa12.4□□□□□ -0.42
PEX1-207ENST00000477342 SLC34A2O95436 690 aa12.39□□□□□ -0.43
PEX1-207ENST00000477342 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
PEX1-207ENST00000477342 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
PEX1-207ENST00000477342 LHX6Q9UPM6 363 aa12.37□□□□□ -0.43
PEX1-207ENST00000477342 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.43
PEX1-207ENST00000477342 PDE4AP27815 886 aa12.34□□□□□ -0.43
PEX1-207ENST00000477342 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
PEX1-207ENST00000477342 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
PEX1-207ENST00000477342 NCKAP5LQ9HCH0 1330 aa12.33□□□□□ -0.44
PEX1-207ENST00000477342 PTGER2P43116 358 aa12.32□□□□□ -0.44
PEX1-207ENST00000477342 CRISPLD2Q9H0B8 497 aa12.32□□□□□ -0.44
PEX1-207ENST00000477342 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
PEX1-207ENST00000477342 MFSD10Q14728 455 aa12.3□□□□□ -0.44
PEX1-207ENST00000477342 PBX2P40425 430 aa12.28□□□□□ -0.44
PEX1-207ENST00000477342 NBR1Q14596 966 aa12.27□□□□□ -0.45
PEX1-207ENST00000477342 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
PEX1-207ENST00000477342 KDM4FA0A1W2PPD8 638 aa12.26□□□□□ -0.45
PEX1-207ENST00000477342 KCNV2Q8TDN2 545 aa12.25□□□□□ -0.45
PEX1-207ENST00000477342 LARP6Q9BRS8 491 aaKnown RBP12.25□□□□□ -0.45
PEX1-207ENST00000477342 FOXK1P85037 733 aa12.24□□□□□ -0.45
PEX1-207ENST00000477342 E2F4Q16254 413 aa12.24□□□□□ -0.45
PEX1-207ENST00000477342 PLPP6Q8IY26 295 aa12.24□□□□□ -0.45
PEX1-207ENST00000477342 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
PEX1-207ENST00000477342 DDX27Q96GQ7 796 aaKnown RBP12.22□□□□□ -0.45
PEX1-207ENST00000477342 DSG2Q14126 1118 aa12.21□□□□□ -0.45
PEX1-207ENST00000477342 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
PEX1-207ENST00000477342 ARHGAP33O14559 1287 aa12.18□□□□□ -0.46
PEX1-207ENST00000477342 CAMK2BQ13554 666 aa12.18□□□□□ -0.46
PEX1-207ENST00000477342 PSDA5PKW4 1024 aaPredicted RBP12.17□□□□□ -0.46
PEX1-207ENST00000477342 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
PEX1-207ENST00000477342 ADGRD1Q6QNK2 874 aa12.15□□□□□ -0.46
PEX1-207ENST00000477342 PPP1R15BQ5SWA1 713 aa12.14□□□□□ -0.47
PEX1-207ENST00000477342 PSEN2P49810 448 aa12.13□□□□□ -0.47
PEX1-207ENST00000477342 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
PEX1-207ENST00000477342 TBC1D12O60347 775 aa12.1□□□□□ -0.47
PEX1-207ENST00000477342 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.48
PEX1-207ENST00000477342 TK2O00142 265 aa12.07□□□□□ -0.48
PEX1-207ENST00000477342 HRO43593 1189 aa12.07□□□□□ -0.48
PEX1-207ENST00000477342 OXER1Q8TDS5 423 aa12.07□□□□□ -0.48
PEX1-207ENST00000477342 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
PEX1-207ENST00000477342 HCSTQ9UBK5 93 aa12.04□□□□□ -0.48
PEX1-207ENST00000477342 KCNK17Q96T54 332 aa12.01□□□□□ -0.49
PEX1-207ENST00000477342 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
PEX1-207ENST00000477342 TESPA1A2RU30 521 aaPredicted RBP12□□□□□ -0.49
PEX1-207ENST00000477342 TPRNQ4KMQ1 711 aa12□□□□□ -0.49
PEX1-207ENST00000477342 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
PEX1-207ENST00000477342 SEMA3EO15041 775 aa11.98□□□□□ -0.49
PEX1-207ENST00000477342 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
PEX1-207ENST00000477342 ZNF454Q8N9F8 522 aa11.98□□□□□ -0.49
PEX1-207ENST00000477342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
PEX1-207ENST00000477342 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
PEX1-207ENST00000477342 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
PEX1-207ENST00000477342 TULP1O00294 542 aaPredicted RBP11.95□□□□□ -0.5
PEX1-207ENST00000477342 KCNH8Q96L42 1107 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms