RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
NSMCE4A-208ENST00000477289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
NSMCE4A-208ENST00000477289 RIOK3O14730 519 aaKnown RBP10.5□□□□□ -0.73
NSMCE4A-208ENST00000477289 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
NSMCE4A-208ENST00000477289 ARSIQ5FYB1 569 aa10.47□□□□□ -0.73
NSMCE4A-208ENST00000477289 VGFO15240 615 aaPredicted RBP10.46□□□□□ -0.73
NSMCE4A-208ENST00000477289 PTGER2P43116 358 aa10.43□□□□□ -0.74
NSMCE4A-208ENST00000477289 KHSRPQ92945 711 aaKnown RBP eCLIP10.42□□□□□ -0.74
NSMCE4A-208ENST00000477289 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
NSMCE4A-208ENST00000477289 ZNF316A6NFI3 1004 aaPredicted RBP10.4□□□□□ -0.74
NSMCE4A-208ENST00000477289 PKD2Q13563 968 aa10.4□□□□□ -0.74
NSMCE4A-208ENST00000477289 NLRP6P59044 892 aa10.39□□□□□ -0.75
NSMCE4A-208ENST00000477289 ECM2O94769 699 aaPredicted RBP10.37□□□□□ -0.75
NSMCE4A-208ENST00000477289 FBXO22Q8NEZ5 403 aa10.37□□□□□ -0.75
NSMCE4A-208ENST00000477289 LSM11P83369 360 aaKnown RBP eCLIP10.35□□□□□ -0.75
NSMCE4A-208ENST00000477289 BCL11BQ9C0K0 894 aaPredicted RBP10.34□□□□□ -0.75
NSMCE4A-208ENST00000477289 RGL2O15211 777 aa10.33□□□□□ -0.76
NSMCE4A-208ENST00000477289 NISCHQ9Y2I1 1504 aa10.33□□□□□ -0.76
NSMCE4A-208ENST00000477289 KIF3CO14782 793 aa10.31□□□□□ -0.76
NSMCE4A-208ENST00000477289 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
NSMCE4A-208ENST00000477289 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
NSMCE4A-208ENST00000477289 C2orf72A6NCS6 295 aa10.3□□□□□ -0.76
NSMCE4A-208ENST00000477289 NUDT7P0C024 238 aa10.3□□□□□ -0.76
NSMCE4A-208ENST00000477289 TAOK2Q9UL54 1235 aa10.29□□□□□ -0.76
NSMCE4A-208ENST00000477289 PBX2P40425 430 aa10.27□□□□□ -0.77
NSMCE4A-208ENST00000477289 POTEEQ6S8J3 1075 aa10.27□□□□□ -0.77
NSMCE4A-208ENST00000477289 LHX6Q9UPM6 363 aa10.26□□□□□ -0.77
NSMCE4A-208ENST00000477289 AXIN2Q9Y2T1 843 aa10.26□□□□□ -0.77
NSMCE4A-208ENST00000477289 STK25O00506 426 aa10.25□□□□□ -0.77
NSMCE4A-208ENST00000477289 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
NSMCE4A-208ENST00000477289 SLC34A2O95436 690 aa10.24□□□□□ -0.77
NSMCE4A-208ENST00000477289 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
NSMCE4A-208ENST00000477289 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
NSMCE4A-208ENST00000477289 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
NSMCE4A-208ENST00000477289 ADGRD1Q6QNK2 874 aa10.16□□□□□ -0.78
NSMCE4A-208ENST00000477289 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
NSMCE4A-208ENST00000477289 PSDA5PKW4 1024 aaPredicted RBP10.12□□□□□ -0.79
NSMCE4A-208ENST00000477289 KDM4FA0A1W2PPD8 638 aa10.11□□□□□ -0.79
NSMCE4A-208ENST00000477289 PPP1R37O75864 691 aa10.1□□□□□ -0.79
NSMCE4A-208ENST00000477289 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
NSMCE4A-208ENST00000477289 HS6ST3Q8IZP7 471 aa10.09□□□□□ -0.79
NSMCE4A-208ENST00000477289 TK2O00142 265 aa10.08□□□□□ -0.8
NSMCE4A-208ENST00000477289 HRO43593 1189 aa10.08□□□□□ -0.8
NSMCE4A-208ENST00000477289 PSEN2P49810 448 aa10.08□□□□□ -0.8
NSMCE4A-208ENST00000477289 PTCD2Q8WV60 388 aaKnown RBP10.08□□□□□ -0.8
NSMCE4A-208ENST00000477289 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
NSMCE4A-208ENST00000477289 FOXK1P85037 733 aa10.03□□□□□ -0.8
NSMCE4A-208ENST00000477289 PLPP6Q8IY26 295 aa10.03□□□□□ -0.8
NSMCE4A-208ENST00000477289 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.81
NSMCE4A-208ENST00000477289 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
NSMCE4A-208ENST00000477289 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
NSMCE4A-208ENST00000477289 STAC3Q96MF2 364 aa9.99□□□□□ -0.81
NSMCE4A-208ENST00000477289 DNAJC5Q9H3Z4 198 aa9.99□□□□□ -0.81
NSMCE4A-208ENST00000477289 GPHNQ9NQX3 736 aaPredicted RBP9.99□□□□□ -0.81
NSMCE4A-208ENST00000477289 TBC1D12O60347 775 aa9.97□□□□□ -0.81
NSMCE4A-208ENST00000477289 DSG2Q14126 1118 aa9.97□□□□□ -0.81
NSMCE4A-208ENST00000477289 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
NSMCE4A-208ENST00000477289 KCNH8Q96L42 1107 aa9.94□□□□□ -0.82
NSMCE4A-208ENST00000477289 VPS9D1Q9Y2B5 631 aa9.93□□□□□ -0.82
NSMCE4A-208ENST00000477289 PTPN5P54829 565 aa9.92□□□□□ -0.82
NSMCE4A-208ENST00000477289 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
NSMCE4A-208ENST00000477289 ZNF454Q8N9F8 522 aa9.87□□□□□ -0.83
NSMCE4A-208ENST00000477289 UPF1Q92900 1129 aaKnown RBP eCLIP9.86□□□□□ -0.83
NSMCE4A-208ENST00000477289 SLC4A5Q9BY07 1137 aa9.86□□□□□ -0.83
NSMCE4A-208ENST00000477289 BCL2L12Q9HB09 334 aa9.86□□□□□ -0.83
NSMCE4A-208ENST00000477289 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
NSMCE4A-208ENST00000477289 BHMG1C9JSJ3 638 aaPredicted RBP9.84□□□□□ -0.83
NSMCE4A-208ENST00000477289 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
NSMCE4A-208ENST00000477289 THSD4Q6ZMP0 1018 aa9.84□□□□□ -0.83
NSMCE4A-208ENST00000477289 RGS20O76081 388 aa9.83□□□□□ -0.84
NSMCE4A-208ENST00000477289 RYDENQ9NUL5 291 aaKnown RBP9.83□□□□□ -0.84
NSMCE4A-208ENST00000477289 DCAF8L2P0C7V8 631 aa9.81□□□□□ -0.84
NSMCE4A-208ENST00000477289 PTPREP23469 700 aa9.81□□□□□ -0.84
NSMCE4A-208ENST00000477289 FOSBP53539 338 aa9.81□□□□□ -0.84
NSMCE4A-208ENST00000477289 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
NSMCE4A-208ENST00000477289 ZBED2Q9BTP6 218 aa9.8□□□□□ -0.84
NSMCE4A-208ENST00000477289 WNT2BQ93097 391 aa9.79□□□□□ -0.84
NSMCE4A-208ENST00000477289 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
NSMCE4A-208ENST00000477289 A0A0G2JS52 829 aa9.78□□□□□ -0.84
NSMCE4A-208ENST00000477289 PPP1R15BQ5SWA1 713 aa9.78□□□□□ -0.84
NSMCE4A-208ENST00000477289 MRPL50Q8N5N7 158 aaKnown RBP9.78□□□□□ -0.84
NSMCE4A-208ENST00000477289 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
NSMCE4A-208ENST00000477289 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
NSMCE4A-208ENST00000477289 NCKAP5LQ9HCH0 1330 aa9.76□□□□□ -0.85
NSMCE4A-208ENST00000477289 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
NSMCE4A-208ENST00000477289 ZDHHC16Q969W1 377 aa9.74□□□□□ -0.85
NSMCE4A-208ENST00000477289 EVI5O60447 810 aa9.73□□□□□ -0.85
NSMCE4A-208ENST00000477289 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
NSMCE4A-208ENST00000477289 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
NSMCE4A-208ENST00000477289 PDE4AP27815 886 aa9.7□□□□□ -0.86
NSMCE4A-208ENST00000477289 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
NSMCE4A-208ENST00000477289 LARP6Q9BRS8 491 aaKnown RBP9.66□□□□□ -0.86
NSMCE4A-208ENST00000477289 MFSD10Q14728 455 aa9.65□□□□□ -0.86
NSMCE4A-208ENST00000477289 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
NSMCE4A-208ENST00000477289 RABGEF1Q9UJ41 708 aa9.65□□□□□ -0.86
NSMCE4A-208ENST00000477289 PPP1R3GB7ZBB8 358 aa9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 ITGBL1O95965 494 aaPredicted RBP9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 MAP3K9P80192 1104 aa9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 PROX2Q3B8N5 592 aa9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms