RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
NSMCE4A-208ENST00000477289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
NSMCE4A-208ENST00000477289 RIOK3O14730 519 aaKnown RBP10.5□□□□□ -0.73
NSMCE4A-208ENST00000477289 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
NSMCE4A-208ENST00000477289 ARSIQ5FYB1 569 aa10.47□□□□□ -0.73
NSMCE4A-208ENST00000477289 VGFO15240 615 aaPredicted RBP10.46□□□□□ -0.73
NSMCE4A-208ENST00000477289 PTGER2P43116 358 aa10.43□□□□□ -0.74
NSMCE4A-208ENST00000477289 KHSRPQ92945 711 aaKnown RBP eCLIP10.42□□□□□ -0.74
NSMCE4A-208ENST00000477289 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
NSMCE4A-208ENST00000477289 ZNF316A6NFI3 1004 aaPredicted RBP10.4□□□□□ -0.74
NSMCE4A-208ENST00000477289 PKD2Q13563 968 aa10.4□□□□□ -0.74
NSMCE4A-208ENST00000477289 NLRP6P59044 892 aa10.39□□□□□ -0.75
NSMCE4A-208ENST00000477289 ECM2O94769 699 aaPredicted RBP10.37□□□□□ -0.75
NSMCE4A-208ENST00000477289 FBXO22Q8NEZ5 403 aa10.37□□□□□ -0.75
NSMCE4A-208ENST00000477289 LSM11P83369 360 aaKnown RBP eCLIP10.35□□□□□ -0.75
NSMCE4A-208ENST00000477289 BCL11BQ9C0K0 894 aaPredicted RBP10.34□□□□□ -0.75
NSMCE4A-208ENST00000477289 RGL2O15211 777 aa10.33□□□□□ -0.76
NSMCE4A-208ENST00000477289 NISCHQ9Y2I1 1504 aa10.33□□□□□ -0.76
NSMCE4A-208ENST00000477289 KIF3CO14782 793 aa10.31□□□□□ -0.76
NSMCE4A-208ENST00000477289 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
NSMCE4A-208ENST00000477289 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
NSMCE4A-208ENST00000477289 C2orf72A6NCS6 295 aa10.3□□□□□ -0.76
NSMCE4A-208ENST00000477289 NUDT7P0C024 238 aa10.3□□□□□ -0.76
NSMCE4A-208ENST00000477289 TAOK2Q9UL54 1235 aa10.29□□□□□ -0.76
NSMCE4A-208ENST00000477289 PBX2P40425 430 aa10.27□□□□□ -0.77
NSMCE4A-208ENST00000477289 POTEEQ6S8J3 1075 aa10.27□□□□□ -0.77
NSMCE4A-208ENST00000477289 LHX6Q9UPM6 363 aa10.26□□□□□ -0.77
NSMCE4A-208ENST00000477289 AXIN2Q9Y2T1 843 aa10.26□□□□□ -0.77
NSMCE4A-208ENST00000477289 STK25O00506 426 aa10.25□□□□□ -0.77
NSMCE4A-208ENST00000477289 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
NSMCE4A-208ENST00000477289 SLC34A2O95436 690 aa10.24□□□□□ -0.77
NSMCE4A-208ENST00000477289 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
NSMCE4A-208ENST00000477289 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
NSMCE4A-208ENST00000477289 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
NSMCE4A-208ENST00000477289 ADGRD1Q6QNK2 874 aa10.16□□□□□ -0.78
NSMCE4A-208ENST00000477289 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
NSMCE4A-208ENST00000477289 PSDA5PKW4 1024 aaPredicted RBP10.12□□□□□ -0.79
NSMCE4A-208ENST00000477289 KDM4FA0A1W2PPD8 638 aa10.11□□□□□ -0.79
NSMCE4A-208ENST00000477289 PPP1R37O75864 691 aa10.1□□□□□ -0.79
NSMCE4A-208ENST00000477289 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
NSMCE4A-208ENST00000477289 HS6ST3Q8IZP7 471 aa10.09□□□□□ -0.79
NSMCE4A-208ENST00000477289 TK2O00142 265 aa10.08□□□□□ -0.8
NSMCE4A-208ENST00000477289 HRO43593 1189 aa10.08□□□□□ -0.8
NSMCE4A-208ENST00000477289 PSEN2P49810 448 aa10.08□□□□□ -0.8
NSMCE4A-208ENST00000477289 PTCD2Q8WV60 388 aaKnown RBP10.08□□□□□ -0.8
NSMCE4A-208ENST00000477289 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
NSMCE4A-208ENST00000477289 FOXK1P85037 733 aa10.03□□□□□ -0.8
NSMCE4A-208ENST00000477289 PLPP6Q8IY26 295 aa10.03□□□□□ -0.8
NSMCE4A-208ENST00000477289 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.81
NSMCE4A-208ENST00000477289 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
NSMCE4A-208ENST00000477289 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
NSMCE4A-208ENST00000477289 STAC3Q96MF2 364 aa9.99□□□□□ -0.81
NSMCE4A-208ENST00000477289 DNAJC5Q9H3Z4 198 aa9.99□□□□□ -0.81
NSMCE4A-208ENST00000477289 GPHNQ9NQX3 736 aaPredicted RBP9.99□□□□□ -0.81
NSMCE4A-208ENST00000477289 TBC1D12O60347 775 aa9.97□□□□□ -0.81
NSMCE4A-208ENST00000477289 DSG2Q14126 1118 aa9.97□□□□□ -0.81
NSMCE4A-208ENST00000477289 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
NSMCE4A-208ENST00000477289 KCNH8Q96L42 1107 aa9.94□□□□□ -0.82
NSMCE4A-208ENST00000477289 VPS9D1Q9Y2B5 631 aa9.93□□□□□ -0.82
NSMCE4A-208ENST00000477289 PTPN5P54829 565 aa9.92□□□□□ -0.82
NSMCE4A-208ENST00000477289 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
NSMCE4A-208ENST00000477289 ZNF454Q8N9F8 522 aa9.87□□□□□ -0.83
NSMCE4A-208ENST00000477289 UPF1Q92900 1129 aaKnown RBP eCLIP9.86□□□□□ -0.83
NSMCE4A-208ENST00000477289 SLC4A5Q9BY07 1137 aa9.86□□□□□ -0.83
NSMCE4A-208ENST00000477289 BCL2L12Q9HB09 334 aa9.86□□□□□ -0.83
NSMCE4A-208ENST00000477289 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
NSMCE4A-208ENST00000477289 BHMG1C9JSJ3 638 aaPredicted RBP9.84□□□□□ -0.83
NSMCE4A-208ENST00000477289 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
NSMCE4A-208ENST00000477289 THSD4Q6ZMP0 1018 aa9.84□□□□□ -0.83
NSMCE4A-208ENST00000477289 RGS20O76081 388 aa9.83□□□□□ -0.84
NSMCE4A-208ENST00000477289 RYDENQ9NUL5 291 aaKnown RBP9.83□□□□□ -0.84
NSMCE4A-208ENST00000477289 DCAF8L2P0C7V8 631 aa9.81□□□□□ -0.84
NSMCE4A-208ENST00000477289 PTPREP23469 700 aa9.81□□□□□ -0.84
NSMCE4A-208ENST00000477289 FOSBP53539 338 aa9.81□□□□□ -0.84
NSMCE4A-208ENST00000477289 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
NSMCE4A-208ENST00000477289 ZBED2Q9BTP6 218 aa9.8□□□□□ -0.84
NSMCE4A-208ENST00000477289 WNT2BQ93097 391 aa9.79□□□□□ -0.84
NSMCE4A-208ENST00000477289 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
NSMCE4A-208ENST00000477289 A0A0G2JS52 829 aa9.78□□□□□ -0.84
NSMCE4A-208ENST00000477289 PPP1R15BQ5SWA1 713 aa9.78□□□□□ -0.84
NSMCE4A-208ENST00000477289 MRPL50Q8N5N7 158 aaKnown RBP9.78□□□□□ -0.84
NSMCE4A-208ENST00000477289 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
NSMCE4A-208ENST00000477289 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
NSMCE4A-208ENST00000477289 NCKAP5LQ9HCH0 1330 aa9.76□□□□□ -0.85
NSMCE4A-208ENST00000477289 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
NSMCE4A-208ENST00000477289 ZDHHC16Q969W1 377 aa9.74□□□□□ -0.85
NSMCE4A-208ENST00000477289 EVI5O60447 810 aa9.73□□□□□ -0.85
NSMCE4A-208ENST00000477289 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
NSMCE4A-208ENST00000477289 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
NSMCE4A-208ENST00000477289 PDE4AP27815 886 aa9.7□□□□□ -0.86
NSMCE4A-208ENST00000477289 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
NSMCE4A-208ENST00000477289 LARP6Q9BRS8 491 aaKnown RBP9.66□□□□□ -0.86
NSMCE4A-208ENST00000477289 MFSD10Q14728 455 aa9.65□□□□□ -0.86
NSMCE4A-208ENST00000477289 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
NSMCE4A-208ENST00000477289 RABGEF1Q9UJ41 708 aa9.65□□□□□ -0.86
NSMCE4A-208ENST00000477289 PPP1R3GB7ZBB8 358 aa9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 ITGBL1O95965 494 aaPredicted RBP9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 MAP3K9P80192 1104 aa9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 PROX2Q3B8N5 592 aa9.64□□□□□ -0.87
NSMCE4A-208ENST00000477289 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms