RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
PIKFYVE-209ENST00000477200 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
PIKFYVE-209ENST00000477200 FBXO22Q8NEZ5 403 aa12.75□□□□□ -0.37
PIKFYVE-209ENST00000477200 BCL11BQ9C0K0 894 aaPredicted RBP12.75□□□□□ -0.37
PIKFYVE-209ENST00000477200 NLRP6P59044 892 aa12.73□□□□□ -0.37
PIKFYVE-209ENST00000477200 STK24Q9Y6E0 443 aa12.7□□□□□ -0.38
PIKFYVE-209ENST00000477200 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
PIKFYVE-209ENST00000477200 ZNF687Q8N1G0 1237 aa12.69□□□□□ -0.38
PIKFYVE-209ENST00000477200 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
PIKFYVE-209ENST00000477200 KHSRPQ92945 711 aaKnown RBP eCLIP12.66□□□□□ -0.38
PIKFYVE-209ENST00000477200 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
PIKFYVE-209ENST00000477200 STK25O00506 426 aa12.63□□□□□ -0.39
PIKFYVE-209ENST00000477200 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
PIKFYVE-209ENST00000477200 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
PIKFYVE-209ENST00000477200 KIF3CO14782 793 aa12.6□□□□□ -0.39
PIKFYVE-209ENST00000477200 C2orf72A6NCS6 295 aa12.58□□□□□ -0.4
PIKFYVE-209ENST00000477200 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
PIKFYVE-209ENST00000477200 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
PIKFYVE-209ENST00000477200 RGL2O15211 777 aa12.57□□□□□ -0.4
PIKFYVE-209ENST00000477200 PKD2Q13563 968 aa12.56□□□□□ -0.4
PIKFYVE-209ENST00000477200 NUDT7P0C024 238 aa12.51□□□□□ -0.41
PIKFYVE-209ENST00000477200 ANKRD13DQ6ZTN6 518 aa12.51□□□□□ -0.41
PIKFYVE-209ENST00000477200 PPP1R37O75864 691 aa12.47□□□□□ -0.41
PIKFYVE-209ENST00000477200 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
PIKFYVE-209ENST00000477200 SLC34A2O95436 690 aa12.46□□□□□ -0.41
PIKFYVE-209ENST00000477200 PTGER2P43116 358 aa12.46□□□□□ -0.41
PIKFYVE-209ENST00000477200 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.41
PIKFYVE-209ENST00000477200 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
PIKFYVE-209ENST00000477200 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
PIKFYVE-209ENST00000477200 TMC2Q8TDI7 906 aa12.44□□□□□ -0.42
PIKFYVE-209ENST00000477200 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
PIKFYVE-209ENST00000477200 PBX2P40425 430 aa12.38□□□□□ -0.43
PIKFYVE-209ENST00000477200 KDM4FA0A1W2PPD8 638 aa12.33□□□□□ -0.44
PIKFYVE-209ENST00000477200 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
PIKFYVE-209ENST00000477200 FOXK1P85037 733 aa12.29□□□□□ -0.44
PIKFYVE-209ENST00000477200 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
PIKFYVE-209ENST00000477200 PLPP6Q8IY26 295 aa12.28□□□□□ -0.44
PIKFYVE-209ENST00000477200 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
PIKFYVE-209ENST00000477200 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
PIKFYVE-209ENST00000477200 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
PIKFYVE-209ENST00000477200 PSDA5PKW4 1024 aaPredicted RBP12.25□□□□□ -0.45
PIKFYVE-209ENST00000477200 DSG2Q14126 1118 aa12.24□□□□□ -0.45
PIKFYVE-209ENST00000477200 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
PIKFYVE-209ENST00000477200 PSEN2P49810 448 aa12.22□□□□□ -0.45
PIKFYVE-209ENST00000477200 TK2O00142 265 aa12.18□□□□□ -0.46
PIKFYVE-209ENST00000477200 HRO43593 1189 aa12.18□□□□□ -0.46
PIKFYVE-209ENST00000477200 CHGAP10645 457 aaKnown RBP12.18□□□□□ -0.46
PIKFYVE-209ENST00000477200 HCSTQ9UBK5 93 aa12.18□□□□□ -0.46
PIKFYVE-209ENST00000477200 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
PIKFYVE-209ENST00000477200 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
PIKFYVE-209ENST00000477200 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
PIKFYVE-209ENST00000477200 TBC1D12O60347 775 aa12.15□□□□□ -0.46
PIKFYVE-209ENST00000477200 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
PIKFYVE-209ENST00000477200 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
PIKFYVE-209ENST00000477200 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
PIKFYVE-209ENST00000477200 KCNK17Q96T54 332 aa12.08□□□□□ -0.48
PIKFYVE-209ENST00000477200 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
PIKFYVE-209ENST00000477200 KCTD12Q96CX2 325 aaKnown RBP12.06□□□□□ -0.48
PIKFYVE-209ENST00000477200 VPS9D1Q9Y2B5 631 aa12.04□□□□□ -0.48
PIKFYVE-209ENST00000477200 PPP1R15BQ5SWA1 713 aa12.03□□□□□ -0.48
PIKFYVE-209ENST00000477200 ZNF454Q8N9F8 522 aa12.03□□□□□ -0.48
PIKFYVE-209ENST00000477200 STAC3Q96MF2 364 aa12.02□□□□□ -0.49
PIKFYVE-209ENST00000477200 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
PIKFYVE-209ENST00000477200 KCNH8Q96L42 1107 aa12□□□□□ -0.49
PIKFYVE-209ENST00000477200 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
PIKFYVE-209ENST00000477200 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
PIKFYVE-209ENST00000477200 FOSBP53539 338 aa11.98□□□□□ -0.49
PIKFYVE-209ENST00000477200 PDE4AP27815 886 aa11.97□□□□□ -0.49
PIKFYVE-209ENST00000477200 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
PIKFYVE-209ENST00000477200 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
PIKFYVE-209ENST00000477200 BHMG1C9JSJ3 638 aaPredicted RBP11.94□□□□□ -0.5
PIKFYVE-209ENST00000477200 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
PIKFYVE-209ENST00000477200 PTPN5P54829 565 aa11.94□□□□□ -0.5
PIKFYVE-209ENST00000477200 EVI5O60447 810 aa11.92□□□□□ -0.5
PIKFYVE-209ENST00000477200 PTPREP23469 700 aa11.92□□□□□ -0.5
PIKFYVE-209ENST00000477200 ZBED2Q9BTP6 218 aa11.92□□□□□ -0.5
PIKFYVE-209ENST00000477200 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
PIKFYVE-209ENST00000477200 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
PIKFYVE-209ENST00000477200 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
PIKFYVE-209ENST00000477200 THSD4Q6ZMP0 1018 aa11.88□□□□□ -0.51
PIKFYVE-209ENST00000477200 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
PIKFYVE-209ENST00000477200 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
PIKFYVE-209ENST00000477200 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
PIKFYVE-209ENST00000477200 MFSD10Q14728 455 aa11.85□□□□□ -0.51
PIKFYVE-209ENST00000477200 WNT2BQ93097 391 aa11.84□□□□□ -0.51
PIKFYVE-209ENST00000477200 EMILIN3Q9NT22 766 aa11.84□□□□□ -0.51
PIKFYVE-209ENST00000477200 MRPL50Q8N5N7 158 aaKnown RBP11.83□□□□□ -0.52
PIKFYVE-209ENST00000477200 GOLGA8CPA6NN73 597 aa11.82□□□□□ -0.52
PIKFYVE-209ENST00000477200 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
PIKFYVE-209ENST00000477200 PCDHGA10Q9Y5H3 936 aa11.8□□□□□ -0.52
PIKFYVE-209ENST00000477200 CADPS2Q86UW7 1296 aa11.78□□□□□ -0.52
PIKFYVE-209ENST00000477200 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
PIKFYVE-209ENST00000477200 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
PIKFYVE-209ENST00000477200 COL9A1P20849 921 aa11.76□□□□□ -0.53
PIKFYVE-209ENST00000477200 PROX2Q3B8N5 592 aa11.76□□□□□ -0.53
PIKFYVE-209ENST00000477200 A0A0G2JS52 829 aa11.73□□□□□ -0.53
PIKFYVE-209ENST00000477200 RABGEF1Q9UJ41 708 aa11.73□□□□□ -0.53
PIKFYVE-209ENST00000477200 RGS20O76081 388 aa11.72□□□□□ -0.53
PIKFYVE-209ENST00000477200 PHF14O94880 888 aa11.71□□□□□ -0.53
PIKFYVE-209ENST00000477200 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms