RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MIER1Q8N108 512 aa12.25□□□□□ -0.45
BRCA1-214ENST00000477152 EPRSP07814 1512 aaKnown RBP12.23□□□□□ -0.45
BRCA1-214ENST00000477152 MAP3K4Q9Y6R4 1608 aa12.23□□□□□ -0.45
BRCA1-214ENST00000477152 PPRC1Q5VV67 1664 aaKnown RBP12.21□□□□□ -0.45
BRCA1-214ENST00000477152 WDR7Q9Y4E6 1490 aa12.2□□□□□ -0.46
BRCA1-214ENST00000477152 SPOCK2Q92563 424 aa12.2□□□□□ -0.46
BRCA1-214ENST00000477152 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
BRCA1-214ENST00000477152 PRXQ9BXM0 1461 aa12.17□□□□□ -0.46
BRCA1-214ENST00000477152 KDM4FA0A1W2PPD8 638 aa12.17□□□□□ -0.46
BRCA1-214ENST00000477152 ABCA8O94911 1581 aa12.16□□□□□ -0.46
BRCA1-214ENST00000477152 CD109Q6YHK3 1445 aa12.15□□□□□ -0.46
BRCA1-214ENST00000477152 MAGI3Q5TCQ9 1506 aa12.14□□□□□ -0.47
BRCA1-214ENST00000477152 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
BRCA1-214ENST00000477152 EEA1Q15075 1411 aa12.14□□□□□ -0.47
BRCA1-214ENST00000477152 ADGRL1O94910 1474 aa12.12□□□□□ -0.47
BRCA1-214ENST00000477152 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
BRCA1-214ENST00000477152 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-214ENST00000477152 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-214ENST00000477152 P3H3Q8IVL6 736 aa12.07□□□□□ -0.48
BRCA1-214ENST00000477152 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
BRCA1-214ENST00000477152 RAPGEF6Q8TEU7 1601 aa12.06□□□□□ -0.48
BRCA1-214ENST00000477152 ATP10BO94823 1461 aa12.05□□□□□ -0.48
BRCA1-214ENST00000477152 ARAP3Q8WWN8 1544 aa12.05□□□□□ -0.48
BRCA1-214ENST00000477152 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
BRCA1-214ENST00000477152 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
BRCA1-214ENST00000477152 RGL2O15211 777 aa12.02□□□□□ -0.49
BRCA1-214ENST00000477152 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
BRCA1-214ENST00000477152 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
BRCA1-214ENST00000477152 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.49
BRCA1-214ENST00000477152 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-214ENST00000477152 NEO1Q92859 1461 aa12.01□□□□□ -0.49
BRCA1-214ENST00000477152 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
BRCA1-214ENST00000477152 ARID3CA6NKF2 412 aa12.01□□□□□ -0.49
BRCA1-214ENST00000477152 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
BRCA1-214ENST00000477152 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
BRCA1-214ENST00000477152 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-214ENST00000477152 CFAP74Q9C0B2 1584 aa11.99□□□□□ -0.49
BRCA1-214ENST00000477152 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-214ENST00000477152 KIF21BO75037 1637 aa11.98□□□□□ -0.49
BRCA1-214ENST00000477152 RANGAP1P46060 587 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-214ENST00000477152 HECW2Q9P2P5 1572 aa11.96□□□□□ -0.49
BRCA1-214ENST00000477152 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
BRCA1-214ENST00000477152 FHOD3Q2V2M9 1422 aa11.95□□□□□ -0.5
BRCA1-214ENST00000477152 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-214ENST00000477152 ARID4BQ4LE39 1312 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-214ENST00000477152 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
BRCA1-214ENST00000477152 CDK11AQ9UQ88 783 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-214ENST00000477152 DENND4BO75064 1496 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-214ENST00000477152 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
BRCA1-214ENST00000477152 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
BRCA1-214ENST00000477152 RAPGEF3O95398 923 aa11.91□□□□□ -0.5
BRCA1-214ENST00000477152 FMN1Q68DA7 1419 aa11.91□□□□□ -0.5
BRCA1-214ENST00000477152 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
BRCA1-214ENST00000477152 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
BRCA1-214ENST00000477152 FANCAO15360 1455 aa11.9□□□□□ -0.5
BRCA1-214ENST00000477152 ADAMTSL3P82987 1691 aa11.89□□□□□ -0.51
BRCA1-214ENST00000477152 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
BRCA1-214ENST00000477152 NUBP1P53384 320 aa11.88□□□□□ -0.51
BRCA1-214ENST00000477152 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-214ENST00000477152 HECW1Q76N89 1606 aa11.88□□□□□ -0.51
BRCA1-214ENST00000477152 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
BRCA1-214ENST00000477152 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-214ENST00000477152 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-214ENST00000477152 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-214ENST00000477152 PTPRMP28827 1452 aa11.87□□□□□ -0.51
BRCA1-214ENST00000477152 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
BRCA1-214ENST00000477152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
BRCA1-214ENST00000477152 ARHGEF40Q8TER5 1519 aa11.87□□□□□ -0.51
BRCA1-214ENST00000477152 RICTORQ6R327 1708 aa11.87□□□□□ -0.51
BRCA1-214ENST00000477152 FRMPD1Q5SYB0 1578 aa11.85□□□□□ -0.51
BRCA1-214ENST00000477152 CLIP1P30622 1438 aa11.85□□□□□ -0.51
BRCA1-214ENST00000477152 MYO5CQ9NQX4 1742 aa11.84□□□□□ -0.51
BRCA1-214ENST00000477152 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
BRCA1-214ENST00000477152 EFCAB2Q5VUJ9 269 aa11.84□□□□□ -0.51
BRCA1-214ENST00000477152 ZFYVE16Q7Z3T8 1539 aa11.84□□□□□ -0.51
BRCA1-214ENST00000477152 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
BRCA1-214ENST00000477152 PLCH2O75038 1416 aa11.83□□□□□ -0.52
BRCA1-214ENST00000477152 MADDQ8WXG6 1647 aa11.83□□□□□ -0.52
BRCA1-214ENST00000477152 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-214ENST00000477152 KIF14Q15058 1648 aa11.82□□□□□ -0.52
BRCA1-214ENST00000477152 CDK13Q14004 1512 aaKnown RBP11.81□□□□□ -0.52
BRCA1-214ENST00000477152 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
BRCA1-214ENST00000477152 RIMS1Q86UR5 1692 aaKnown RBP11.81□□□□□ -0.52
BRCA1-214ENST00000477152 CHGAP10645 457 aaKnown RBP11.81□□□□□ -0.52
BRCA1-214ENST00000477152 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-214ENST00000477152 SCAPERQ9BY12 1400 aa11.81□□□□□ -0.52
BRCA1-214ENST00000477152 PCF11O94913 1555 aaKnown RBP11.8□□□□□ -0.52
BRCA1-214ENST00000477152 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-214ENST00000477152 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
BRCA1-214ENST00000477152 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
BRCA1-214ENST00000477152 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
BRCA1-214ENST00000477152 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
BRCA1-214ENST00000477152 TROQ12816 1431 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-214ENST00000477152 CCDC18Q5T9S5 1454 aa11.77□□□□□ -0.52
BRCA1-214ENST00000477152 FER1L4A9Z1Z3 1794 aa11.77□□□□□ -0.52
BRCA1-214ENST00000477152 ATP10AO60312 1499 aa11.77□□□□□ -0.53
BRCA1-214ENST00000477152 ZNF518AQ6AHZ1 1483 aa11.77□□□□□ -0.53
BRCA1-214ENST00000477152 FBXO41Q8TF61 875 aa11.77□□□□□ -0.53
BRCA1-214ENST00000477152 ARHGAP5Q13017 1502 aa11.77□□□□□ -0.53
BRCA1-214ENST00000477152 GSE1Q14687 1217 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms