RNA–Protein interactions for RNA: ENST00000477047.6

SPATA9-204, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-204ENST00000477047 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
SPATA9-204ENST00000477047 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
SPATA9-204ENST00000477047 ARID4BQ4LE39 1312 aaPredicted RBP9.45□□□□□ -0.9
SPATA9-204ENST00000477047 IL27Q8NEV9 243 aa9.44□□□□□ -0.9
SPATA9-204ENST00000477047 CENPJQ9HC77 1338 aaPredicted RBP9.43□□□□□ -0.9
SPATA9-204ENST00000477047 NCLP19338 710 aaKnown RBP9.43□□□□□ -0.9
SPATA9-204ENST00000477047 VASPP50552 380 aaPredicted RBP9.43□□□□□ -0.9
SPATA9-204ENST00000477047 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
SPATA9-204ENST00000477047 PLCB2Q00722 1185 aa9.41□□□□□ -0.9
SPATA9-204ENST00000477047 CALD1Q05682 793 aaKnown RBP9.41□□□□□ -0.9
SPATA9-204ENST00000477047 PROM2Q8N271 834 aa9.41□□□□□ -0.9
SPATA9-204ENST00000477047 FTSJ3Q8IY81 847 aaKnown RBP9.39□□□□□ -0.91
SPATA9-204ENST00000477047 WASHC2CQ9Y4E1 1318 aa9.39□□□□□ -0.91
SPATA9-204ENST00000477047 POTEFA5A3E0 1075 aa9.38□□□□□ -0.91
SPATA9-204ENST00000477047 CNGB1Q14028 1251 aaPredicted RBP9.37□□□□□ -0.91
SPATA9-204ENST00000477047 TICAM2Q86XR7 235 aa9.37□□□□□ -0.91
SPATA9-204ENST00000477047 USP35Q9P2H5 1018 aa9.37□□□□□ -0.91
SPATA9-204ENST00000477047 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
SPATA9-204ENST00000477047 CCDC9Q9Y3X0 531 aaKnown RBP9.37□□□□□ -0.91
SPATA9-204ENST00000477047 CANXP27824 592 aaKnown RBP9.36□□□□□ -0.91
SPATA9-204ENST00000477047 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
SPATA9-204ENST00000477047 FAM43AQ8N2R8 423 aa9.36□□□□□ -0.91
SPATA9-204ENST00000477047 CLSTN1O94985 981 aa9.35□□□□□ -0.91
SPATA9-204ENST00000477047 BBXQ8WY36 941 aaPredicted RBP9.35□□□□□ -0.91
SPATA9-204ENST00000477047 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
SPATA9-204ENST00000477047 PUS7Q96PZ0 661 aaKnown RBP9.35□□□□□ -0.91
SPATA9-204ENST00000477047 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
SPATA9-204ENST00000477047 HSP90AA2PQ14568 343 aaPredicted RBP9.34□□□□□ -0.91
SPATA9-204ENST00000477047 PPM1GO15355 546 aaPredicted RBP9.33□□□□□ -0.92
SPATA9-204ENST00000477047 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
SPATA9-204ENST00000477047 WASHC2AQ641Q2 1341 aa9.33□□□□□ -0.92
SPATA9-204ENST00000477047 PAK3O75914 559 aaPredicted RBP9.33□□□□□ -0.92
SPATA9-204ENST00000477047 GTF2E1P29083 439 aaPredicted RBP9.33□□□□□ -0.92
SPATA9-204ENST00000477047 TMEM121BQ9BXQ6 578 aaPredicted RBP9.33□□□□□ -0.92
SPATA9-204ENST00000477047 PRDM4Q9UKN5 801 aa9.32□□□□□ -0.92
SPATA9-204ENST00000477047 ZNF316A6NFI3 1004 aaPredicted RBP9.31□□□□□ -0.92
SPATA9-204ENST00000477047 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.31□□□□□ -0.92
SPATA9-204ENST00000477047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
SPATA9-204ENST00000477047 NEFMP07197 916 aa9.29□□□□□ -0.92
SPATA9-204ENST00000477047 MS4A3Q96HJ5 214 aa9.29□□□□□ -0.92
SPATA9-204ENST00000477047 ATN1P54259 1190 aaPredicted RBP9.29□□□□□ -0.92
SPATA9-204ENST00000477047 GRIPAP1Q4V328 841 aa9.29□□□□□ -0.92
SPATA9-204ENST00000477047 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
SPATA9-204ENST00000477047 POLR3GLQ9BT43 218 aa9.29□□□□□ -0.92
SPATA9-204ENST00000477047 CHMP4BQ9H444 224 aaKnown RBP9.29□□□□□ -0.92
SPATA9-204ENST00000477047 PTMAP06454 111 aaKnown RBP9.27□□□□□ -0.93
SPATA9-204ENST00000477047 ANP32BQ92688 251 aaKnown RBP9.27□□□□□ -0.93
SPATA9-204ENST00000477047 SECISBP2LQ93073 1101 aaKnown RBP9.27□□□□□ -0.93
SPATA9-204ENST00000477047 NOP58Q9Y2X3 529 aaKnown RBP9.26□□□□□ -0.93
SPATA9-204ENST00000477047 MCCP23508 829 aa9.25□□□□□ -0.93
SPATA9-204ENST00000477047 NPM1P06748 294 aaKnown RBP eCLIP9.24□□□□□ -0.93
SPATA9-204ENST00000477047 CLGNO14967 610 aa9.24□□□□□ -0.93
SPATA9-204ENST00000477047 SETQ01105 290 aaPredicted RBP9.24□□□□□ -0.93
SPATA9-204ENST00000477047 PKD2Q13563 968 aa9.24□□□□□ -0.93
SPATA9-204ENST00000477047 SLAIN1Q8ND83 568 aa9.24□□□□□ -0.93
SPATA9-204ENST00000477047 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
SPATA9-204ENST00000477047 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
SPATA9-204ENST00000477047 HSP90AA1P07900 732 aaKnown RBP9.21□□□□□ -0.93
SPATA9-204ENST00000477047 CNPY4Q8N129 248 aa9.21□□□□□ -0.93
SPATA9-204ENST00000477047 PTMSP20962 102 aa9.2□□□□□ -0.94
SPATA9-204ENST00000477047 MMP14P50281 582 aa9.2□□□□□ -0.94
SPATA9-204ENST00000477047 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
SPATA9-204ENST00000477047 AXDND1Q5T1B0 1012 aaPredicted RBP9.2□□□□□ -0.94
SPATA9-204ENST00000477047 PLCD4Q9BRC7 762 aa9.2□□□□□ -0.94
SPATA9-204ENST00000477047 PDCL3Q9H2J4 239 aa9.19□□□□□ -0.94
SPATA9-204ENST00000477047 IGSF3O75054 1194 aa9.18□□□□□ -0.94
SPATA9-204ENST00000477047 ANP32AP39687 249 aaKnown RBP9.18□□□□□ -0.94
SPATA9-204ENST00000477047 ZNF622Q969S3 477 aaKnown RBP eCLIP9.18□□□□□ -0.94
SPATA9-204ENST00000477047 MARVELD3Q96A59 401 aa9.18□□□□□ -0.94
SPATA9-204ENST00000477047 MIER1Q8N108 512 aa9.17□□□□□ -0.94
SPATA9-204ENST00000477047 UBTFP17480 764 aaKnown RBP9.16□□□□□ -0.94
SPATA9-204ENST00000477047 PHF14O94880 888 aa9.16□□□□□ -0.94
SPATA9-204ENST00000477047 RGS22Q8NE09 1264 aa9.16□□□□□ -0.94
SPATA9-204ENST00000477047 PSMD1Q99460 953 aa9.16□□□□□ -0.94
SPATA9-204ENST00000477047 NISCHQ9Y2I1 1504 aa9.15□□□□□ -0.94
SPATA9-204ENST00000477047 SPOCK2Q92563 424 aa9.14□□□□□ -0.95
SPATA9-204ENST00000477047 COLQQ9Y215 455 aaPredicted RBP9.14□□□□□ -0.95
SPATA9-204ENST00000477047 SUPT5HO00267 1087 aaKnown RBP9.13□□□□□ -0.95
SPATA9-204ENST00000477047 UTP14CQ5TAP6 766 aaKnown RBP9.13□□□□□ -0.95
SPATA9-204ENST00000477047 SMAP1Q8IYB5 467 aaPredicted RBP9.13□□□□□ -0.95
SPATA9-204ENST00000477047 IRX6P78412 446 aaPredicted RBP9.12□□□□□ -0.95
SPATA9-204ENST00000477047 CC2D2BQ6DHV5 1058 aa9.12□□□□□ -0.95
SPATA9-204ENST00000477047 WWC1Q8IX03 1113 aa9.12□□□□□ -0.95
SPATA9-204ENST00000477047 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
SPATA9-204ENST00000477047 TRIM44Q96DX7 344 aaPredicted RBP9.12□□□□□ -0.95
SPATA9-204ENST00000477047 TAF3Q5VWG9 929 aa9.12□□□□□ -0.95
SPATA9-204ENST00000477047 MAP7D2Q96T17 732 aa9.12□□□□□ -0.95
SPATA9-204ENST00000477047 ECM2O94769 699 aaPredicted RBP9.11□□□□□ -0.95
SPATA9-204ENST00000477047 FAM193AP78312 1265 aa9.11□□□□□ -0.95
SPATA9-204ENST00000477047 CEP120Q8N960 986 aa9.1□□□□□ -0.95
SPATA9-204ENST00000477047 BRPF3Q9ULD4 1205 aa9.1□□□□□ -0.95
SPATA9-204ENST00000477047 SEC24BO95487 1268 aa9.08□□□□□ -0.96
SPATA9-204ENST00000477047 IRX3P78415 501 aaPredicted RBP9.08□□□□□ -0.96
SPATA9-204ENST00000477047 SNPHO15079 494 aa9.07□□□□□ -0.96
SPATA9-204ENST00000477047 RGS3P49796 1198 aa9.07□□□□□ -0.96
SPATA9-204ENST00000477047 NBR1Q14596 966 aa9.07□□□□□ -0.96
SPATA9-204ENST00000477047 RNF166Q96A37 237 aaPredicted RBP9.07□□□□□ -0.96
SPATA9-204ENST00000477047 DNAJC5Q9H3Z4 198 aa9.07□□□□□ -0.96
SPATA9-204ENST00000477047 TPM2P07951 284 aa9.07□□□□□ -0.96
SPATA9-204ENST00000477047 TMEM51Q9NW97 253 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms