RNA–Protein interactions for RNA: ENST00000476978.1

TCEA3-205, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-205ENST00000476978 TTC37Q6PGP7 1564 aa11.72□□□□□ -0.53
TCEA3-205ENST00000476978 PLCH2O75038 1416 aa11.71□□□□□ -0.53
TCEA3-205ENST00000476978 SIGLEC1Q9BZZ2 1709 aa11.71□□□□□ -0.54
TCEA3-205ENST00000476978 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.54
TCEA3-205ENST00000476978 PLPPR3Q6T4P5 718 aa11.7□□□□□ -0.54
TCEA3-205ENST00000476978 EFCAB2Q5VUJ9 269 aa11.69□□□□□ -0.54
TCEA3-205ENST00000476978 POGZQ7Z3K3 1410 aa11.69□□□□□ -0.54
TCEA3-205ENST00000476978 TROQ12816 1431 aaPredicted RBP11.68□□□□□ -0.54
TCEA3-205ENST00000476978 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
TCEA3-205ENST00000476978 FER1L4A9Z1Z3 1794 aa11.67□□□□□ -0.54
TCEA3-205ENST00000476978 CLIP1P30622 1438 aa11.67□□□□□ -0.54
TCEA3-205ENST00000476978 SPATA31D1Q6ZQQ2 1576 aa11.67□□□□□ -0.54
TCEA3-205ENST00000476978 ZMYM4Q5VZL5 1548 aa11.66□□□□□ -0.54
TCEA3-205ENST00000476978 CASKIN1Q8WXD9 1431 aa11.66□□□□□ -0.54
TCEA3-205ENST00000476978 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.54
TCEA3-205ENST00000476978 PREX1Q8TCU6 1659 aa11.65□□□□□ -0.54
TCEA3-205ENST00000476978 MAGI2Q86UL8 1455 aa11.65□□□□□ -0.54
TCEA3-205ENST00000476978 KIF14Q15058 1648 aa11.64□□□□□ -0.55
TCEA3-205ENST00000476978 YEATS2Q9ULM3 1422 aa11.64□□□□□ -0.55
TCEA3-205ENST00000476978 LRRIQ1Q96JM4 1722 aa11.63□□□□□ -0.55
TCEA3-205ENST00000476978 MYO5CQ9NQX4 1742 aa11.63□□□□□ -0.55
TCEA3-205ENST00000476978 STRCQ7RTU9 1775 aa11.63□□□□□ -0.55
TCEA3-205ENST00000476978 CCDC18Q5T9S5 1454 aa11.63□□□□□ -0.55
TCEA3-205ENST00000476978 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
TCEA3-205ENST00000476978 MLECQ14165 292 aa11.62□□□□□ -0.55
TCEA3-205ENST00000476978 AFAP1Q8N556 730 aa11.62□□□□□ -0.55
TCEA3-205ENST00000476978 ARHGEF12Q9NZN5 1544 aa11.6□□□□□ -0.55
TCEA3-205ENST00000476978 ATP10AO60312 1499 aa11.6□□□□□ -0.55
TCEA3-205ENST00000476978 FYCO1Q9BQS8 1478 aa11.6□□□□□ -0.55
TCEA3-205ENST00000476978 ZNF518AQ6AHZ1 1483 aa11.59□□□□□ -0.55
TCEA3-205ENST00000476978 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
TCEA3-205ENST00000476978 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
TCEA3-205ENST00000476978 C9orf84Q5VXU9 1444 aa11.57□□□□□ -0.56
TCEA3-205ENST00000476978 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
TCEA3-205ENST00000476978 CEBPAP49715 358 aaPredicted RBP11.56□□□□□ -0.56
TCEA3-205ENST00000476978 KDM5CP41229 1560 aa11.55□□□□□ -0.56
TCEA3-205ENST00000476978 PTPRTO14522 1441 aa11.54□□□□□ -0.56
TCEA3-205ENST00000476978 UHRF1BP1Q6BDS2 1440 aa11.54□□□□□ -0.56
TCEA3-205ENST00000476978 TRAPPC8Q9Y2L5 1435 aa11.54□□□□□ -0.56
TCEA3-205ENST00000476978 PREX2Q70Z35 1606 aa11.54□□□□□ -0.56
TCEA3-205ENST00000476978 LTBP4Q8N2S1 1624 aa11.54□□□□□ -0.56
TCEA3-205ENST00000476978 ZNF777Q9ULD5 760 aaPredicted RBP11.54□□□□□ -0.56
TCEA3-205ENST00000476978 MLH3Q9UHC1 1453 aa11.53□□□□□ -0.56
TCEA3-205ENST00000476978 IQSEC2Q5JU85 1478 aa11.52□□□□□ -0.56
TCEA3-205ENST00000476978 ABCC1P33527 1531 aa11.52□□□□□ -0.57
TCEA3-205ENST00000476978 GPATCH8Q9UKJ3 1502 aaKnown RBP11.52□□□□□ -0.57
TCEA3-205ENST00000476978 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.57
TCEA3-205ENST00000476978 HNRNPMP52272 730 aaKnown RBP eCLIP11.51□□□□□ -0.57
TCEA3-205ENST00000476978 CFDP1Q9UEE9 299 aaPredicted RBP11.51□□□□□ -0.57
TCEA3-205ENST00000476978 MTUS2Q5JR59 1369 aa11.51□□□□□ -0.57
TCEA3-205ENST00000476978 C3P01024 1663 aa11.5□□□□□ -0.57
TCEA3-205ENST00000476978 CCNB3Q8WWL7 1395 aa11.5□□□□□ -0.57
TCEA3-205ENST00000476978 SETD1BQ9UPS6 1966 aaKnown RBP11.5□□□□□ -0.57
TCEA3-205ENST00000476978 CEP162Q5TB80 1403 aa11.5□□□□□ -0.57
TCEA3-205ENST00000476978 DIP2CQ9Y2E4 1556 aa11.5□□□□□ -0.57
TCEA3-205ENST00000476978 ITSN2Q9NZM3 1697 aa11.49□□□□□ -0.57
TCEA3-205ENST00000476978 REREQ9P2R6 1566 aa11.49□□□□□ -0.57
TCEA3-205ENST00000476978 SPAG9O60271 1321 aaKnown RBP11.48□□□□□ -0.57
TCEA3-205ENST00000476978 ABCA6Q8N139 1617 aa11.48□□□□□ -0.57
TCEA3-205ENST00000476978 SAMD9LQ8IVG5 1584 aa11.47□□□□□ -0.57
TCEA3-205ENST00000476978 AGLP35573 1532 aa11.47□□□□□ -0.57
TCEA3-205ENST00000476978 KIAA1107Q9UPP5 1409 aa11.47□□□□□ -0.57
TCEA3-205ENST00000476978 ESF1Q9H501 851 aaKnown RBP11.47□□□□□ -0.57
TCEA3-205ENST00000476978 KIDINS220Q9ULH0 1771 aa11.46□□□□□ -0.57
TCEA3-205ENST00000476978 PLEKHH2Q8IVE3 1493 aa11.46□□□□□ -0.57
TCEA3-205ENST00000476978 LOC105371045A0A1W2PR82 267 aa11.46□□□□□ -0.57
TCEA3-205ENST00000476978 SYCP2Q9BX26 1530 aa11.45□□□□□ -0.58
TCEA3-205ENST00000476978 NCOA1Q15788 1441 aa11.45□□□□□ -0.58
TCEA3-205ENST00000476978 ZNF644Q9H582 1327 aaPredicted RBP11.44□□□□□ -0.58
TCEA3-205ENST00000476978 EHBP1L1Q8N3D4 1523 aa11.43□□□□□ -0.58
TCEA3-205ENST00000476978 CAMSAP1Q5T5Y3 1602 aa11.42□□□□□ -0.58
TCEA3-205ENST00000476978 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
TCEA3-205ENST00000476978 CNTLNQ9NXG0 1405 aa11.41□□□□□ -0.58
TCEA3-205ENST00000476978 ATP7AQ04656 1500 aa11.4□□□□□ -0.58
TCEA3-205ENST00000476978 UBAP1LF5GYI3 381 aa11.4□□□□□ -0.58
TCEA3-205ENST00000476978 A2MP01023 1474 aa11.39□□□□□ -0.59
TCEA3-205ENST00000476978 MBD5Q9P267 1494 aa11.39□□□□□ -0.59
TCEA3-205ENST00000476978 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
TCEA3-205ENST00000476978 ZMYM3Q14202 1370 aa11.39□□□□□ -0.59
TCEA3-205ENST00000476978 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
TCEA3-205ENST00000476978 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
TCEA3-205ENST00000476978 INO80Q9ULG1 1556 aaPredicted RBP11.38□□□□□ -0.59
TCEA3-205ENST00000476978 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
TCEA3-205ENST00000476978 GGT6Q6P531 493 aa11.38□□□□□ -0.59
TCEA3-205ENST00000476978 MROH2AA6NES4 1674 aa11.38□□□□□ -0.59
TCEA3-205ENST00000476978 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
TCEA3-205ENST00000476978 RTEL1-TNFRSF6BF6WH68 1400 aa11.37□□□□□ -0.59
TCEA3-205ENST00000476978 PPP6R1Q9UPN7 881 aa11.37□□□□□ -0.59
TCEA3-205ENST00000476978 MED1Q15648 1581 aaPredicted RBP11.37□□□□□ -0.59
TCEA3-205ENST00000476978 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
TCEA3-205ENST00000476978 NPATQ14207 1427 aa11.36□□□□□ -0.59
TCEA3-205ENST00000476978 PLXNC1O60486 1568 aa11.36□□□□□ -0.59
TCEA3-205ENST00000476978 ZNF142P52746 1687 aaPredicted RBP11.34□□□□□ -0.59
TCEA3-205ENST00000476978 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
TCEA3-205ENST00000476978 CAMSAP2Q08AD1 1489 aa11.34□□□□□ -0.59
TCEA3-205ENST00000476978 LRRC9Q6ZRR7 1453 aa11.34□□□□□ -0.59
TCEA3-205ENST00000476978 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
TCEA3-205ENST00000476978 TSPY4P0CV99 314 aa11.34□□□□□ -0.59
TCEA3-205ENST00000476978 TSPY10P0CW01 314 aa11.34□□□□□ -0.59
TCEA3-205ENST00000476978 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms