RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
FNDC3B-208ENST00000476794 C3orf67Q6ZVT6 689 aa13.36□□□□□ -0.27
FNDC3B-208ENST00000476794 RYDENQ9NUL5 291 aaKnown RBP13.32□□□□□ -0.28
FNDC3B-208ENST00000476794 BOLA1Q9Y3E2 137 aa13.31□□□□□ -0.28
FNDC3B-208ENST00000476794 EFCAB3Q8N7B9 438 aa13.29□□□□□ -0.28
FNDC3B-208ENST00000476794 SOX12O15370 315 aa13.22□□□□□ -0.29
FNDC3B-208ENST00000476794 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
FNDC3B-208ENST00000476794 HOXB3P14651 431 aaPredicted RBP13.21□□□□□ -0.29
FNDC3B-208ENST00000476794 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
FNDC3B-208ENST00000476794 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
FNDC3B-208ENST00000476794 MFRPQ9BY79 579 aa13.17□□□□□ -0.3
FNDC3B-208ENST00000476794 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
FNDC3B-208ENST00000476794 G3V3G9 751 aa13.16□□□□□ -0.3
FNDC3B-208ENST00000476794 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
FNDC3B-208ENST00000476794 NBR1Q14596 966 aa13.14□□□□□ -0.31
FNDC3B-208ENST00000476794 MICALL2Q8IY33 904 aa13.13□□□□□ -0.31
FNDC3B-208ENST00000476794 EMP3P54852 163 aa13.12□□□□□ -0.31
FNDC3B-208ENST00000476794 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
FNDC3B-208ENST00000476794 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
FNDC3B-208ENST00000476794 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
FNDC3B-208ENST00000476794 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
FNDC3B-208ENST00000476794 CADPS2Q86UW7 1296 aa13.09□□□□□ -0.31
FNDC3B-208ENST00000476794 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
FNDC3B-208ENST00000476794 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
FNDC3B-208ENST00000476794 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
FNDC3B-208ENST00000476794 NLRP6P59044 892 aa13.06□□□□□ -0.32
FNDC3B-208ENST00000476794 KRTAP3-3Q9BYR6 98 aa13.06□□□□□ -0.32
FNDC3B-208ENST00000476794 KRTAP3-2Q9BYR7 98 aa13.06□□□□□ -0.32
FNDC3B-208ENST00000476794 PPP1R37O75864 691 aa13.05□□□□□ -0.32
FNDC3B-208ENST00000476794 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
FNDC3B-208ENST00000476794 FAM205CA6NFA0 338 aa13.04□□□□□ -0.32
FNDC3B-208ENST00000476794 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
FNDC3B-208ENST00000476794 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
FNDC3B-208ENST00000476794 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
FNDC3B-208ENST00000476794 ZNF710Q8N1W2 664 aa12.98□□□□□ -0.33
FNDC3B-208ENST00000476794 GPR153Q6NV75 609 aa12.95□□□□□ -0.34
FNDC3B-208ENST00000476794 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
FNDC3B-208ENST00000476794 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
FNDC3B-208ENST00000476794 KIF3CO14782 793 aa12.91□□□□□ -0.34
FNDC3B-208ENST00000476794 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
FNDC3B-208ENST00000476794 ERBB3P21860 1342 aa12.88□□□□□ -0.35
FNDC3B-208ENST00000476794 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
FNDC3B-208ENST00000476794 ZNF687Q8N1G0 1237 aa12.82□□□□□ -0.36
FNDC3B-208ENST00000476794 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
FNDC3B-208ENST00000476794 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
FNDC3B-208ENST00000476794 C2orf72A6NCS6 295 aa12.79□□□□□ -0.36
FNDC3B-208ENST00000476794 PDE4AP27815 886 aa12.79□□□□□ -0.36
FNDC3B-208ENST00000476794 E2F4Q16254 413 aa12.79□□□□□ -0.36
FNDC3B-208ENST00000476794 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
FNDC3B-208ENST00000476794 SLC34A2O95436 690 aa12.76□□□□□ -0.37
FNDC3B-208ENST00000476794 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
FNDC3B-208ENST00000476794 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
FNDC3B-208ENST00000476794 KHSRPQ92945 711 aaKnown RBP eCLIP12.74□□□□□ -0.378e-11■□□□□ 8.9
FNDC3B-208ENST00000476794 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
FNDC3B-208ENST00000476794 MFSD10Q14728 455 aa12.72□□□□□ -0.37
FNDC3B-208ENST00000476794 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
FNDC3B-208ENST00000476794 LMOD2Q6P5Q4 547 aa12.67□□□□□ -0.38
FNDC3B-208ENST00000476794 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
FNDC3B-208ENST00000476794 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
FNDC3B-208ENST00000476794 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
FNDC3B-208ENST00000476794 PCDHGA4Q9Y5G9 962 aa12.64□□□□□ -0.39
FNDC3B-208ENST00000476794 SEMA3EO15041 775 aa12.63□□□□□ -0.39
FNDC3B-208ENST00000476794 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
FNDC3B-208ENST00000476794 NUDT7P0C024 238 aa12.62□□□□□ -0.39
FNDC3B-208ENST00000476794 CAMK2BQ13554 666 aa12.61□□□□□ -0.39
FNDC3B-208ENST00000476794 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
FNDC3B-208ENST00000476794 PPP1R15BQ5SWA1 713 aa12.6□□□□□ -0.39
FNDC3B-208ENST00000476794 POTEEQ6S8J3 1075 aa12.6□□□□□ -0.39
FNDC3B-208ENST00000476794 FOXK1P85037 733 aa12.59□□□□□ -0.39
FNDC3B-208ENST00000476794 PTCD2Q8WV60 388 aaKnown RBP12.59□□□□□ -0.39
FNDC3B-208ENST00000476794 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
FNDC3B-208ENST00000476794 LHX6Q9UPM6 363 aa12.59□□□□□ -0.39
FNDC3B-208ENST00000476794 TESPA1A2RU30 521 aaPredicted RBP12.58□□□□□ -0.4
FNDC3B-208ENST00000476794 PTGER2P43116 358 aa12.58□□□□□ -0.4
FNDC3B-208ENST00000476794 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
FNDC3B-208ENST00000476794 ARIH1Q9Y4X5 557 aaPredicted RBP12.57□□□□□ -0.4
FNDC3B-208ENST00000476794 PBX2P40425 430 aa12.55□□□□□ -0.4
FNDC3B-208ENST00000476794 LSM11P83369 360 aaKnown RBP eCLIP12.55□□□□□ -0.42e-12■■■■■ 35
FNDC3B-208ENST00000476794 DSG2Q14126 1118 aa12.53□□□□□ -0.4
FNDC3B-208ENST00000476794 ANKRD13DQ6ZTN6 518 aa12.51□□□□□ -0.41
FNDC3B-208ENST00000476794 PLPP6Q8IY26 295 aa12.51□□□□□ -0.41
FNDC3B-208ENST00000476794 SMYD5Q6GMV2 418 aa12.49□□□□□ -0.41
FNDC3B-208ENST00000476794 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
FNDC3B-208ENST00000476794 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
FNDC3B-208ENST00000476794 ZC3H15Q8WU90 426 aaKnown RBP12.47□□□□□ -0.41
FNDC3B-208ENST00000476794 DPYSL4O14531 572 aa12.46□□□□□ -0.41
FNDC3B-208ENST00000476794 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
FNDC3B-208ENST00000476794 MLLT3P42568 568 aaPredicted RBP12.43□□□□□ -0.42
FNDC3B-208ENST00000476794 ARHGAP33O14559 1287 aa12.42□□□□□ -0.42
FNDC3B-208ENST00000476794 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
FNDC3B-208ENST00000476794 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
FNDC3B-208ENST00000476794 TBC1D12O60347 775 aa12.38□□□□□ -0.43
FNDC3B-208ENST00000476794 PDIA6Q15084 440 aa12.38□□□□□ -0.43
FNDC3B-208ENST00000476794 TK2O00142 265 aa12.37□□□□□ -0.43
FNDC3B-208ENST00000476794 RBM26Q5T8P6 1007 aaKnown RBP12.37□□□□□ -0.43
FNDC3B-208ENST00000476794 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
FNDC3B-208ENST00000476794 HRO43593 1189 aa12.35□□□□□ -0.43
FNDC3B-208ENST00000476794 SLC24A3Q9HC58 644 aa12.35□□□□□ -0.43
FNDC3B-208ENST00000476794 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
FNDC3B-208ENST00000476794 ZMYND10O75800 440 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms