RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 PHF8Q9UPP1 1060 aa16.55■□□□□ 0.24
NUP58-209ENST00000476553 GPR153Q6NV75 609 aa16.53■□□□□ 0.24
NUP58-209ENST00000476553 ZNF687Q8N1G0 1237 aa16.47■□□□□ 0.23
NUP58-209ENST00000476553 RNF166Q96A37 237 aaPredicted RBP16.46■□□□□ 0.23
NUP58-209ENST00000476553 FBXO22Q8NEZ5 403 aa16.42■□□□□ 0.22
NUP58-209ENST00000476553 NLRP6P59044 892 aa16.39■□□□□ 0.21
NUP58-209ENST00000476553 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
NUP58-209ENST00000476553 ARSIQ5FYB1 569 aa16.36■□□□□ 0.21
NUP58-209ENST00000476553 BCL11BQ9C0K0 894 aaPredicted RBP16.36■□□□□ 0.21
NUP58-209ENST00000476553 PTGER2P43116 358 aa16.32■□□□□ 0.2
NUP58-209ENST00000476553 MFRPQ9BY79 579 aa16.31■□□□□ 0.2
NUP58-209ENST00000476553 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
NUP58-209ENST00000476553 TAOK2Q9UL54 1235 aa16.3■□□□□ 0.2
NUP58-209ENST00000476553 KIF3CO14782 793 aa16.29■□□□□ 0.2
NUP58-209ENST00000476553 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.22e-8■■■□□ 15.2
NUP58-209ENST00000476553 STK24Q9Y6E0 443 aa16.27■□□□□ 0.2
NUP58-209ENST00000476553 C2orf72A6NCS6 295 aa16.21■□□□□ 0.19
NUP58-209ENST00000476553 LSM11P83369 360 aaKnown RBP eCLIP16.2■□□□□ 0.189e-11■■□□□ 14.5
NUP58-209ENST00000476553 STK25O00506 426 aa16.19■□□□□ 0.18
NUP58-209ENST00000476553 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
NUP58-209ENST00000476553 SLC34A2O95436 690 aa16.15■□□□□ 0.18
NUP58-209ENST00000476553 NUDT7P0C024 238 aa16.14■□□□□ 0.17
NUP58-209ENST00000476553 PBX2P40425 430 aa16.14■□□□□ 0.17
NUP58-209ENST00000476553 POTEEQ6S8J3 1075 aa16.1■□□□□ 0.17
NUP58-209ENST00000476553 PCDHGA4Q9Y5G9 962 aa16.1■□□□□ 0.17
NUP58-209ENST00000476553 ECM2O94769 699 aaPredicted RBP16.09■□□□□ 0.17
NUP58-209ENST00000476553 LHX6Q9UPM6 363 aa16.09■□□□□ 0.17
NUP58-209ENST00000476553 RGL2O15211 777 aa16.03■□□□□ 0.16
NUP58-209ENST00000476553 TMC2Q8TDI7 906 aa16.03■□□□□ 0.16
NUP58-209ENST00000476553 PKD2Q13563 968 aa16.02■□□□□ 0.16
NUP58-209ENST00000476553 AXIN2Q9Y2T1 843 aa16■□□□□ 0.15
NUP58-209ENST00000476553 PPP1R37O75864 691 aa15.96■□□□□ 0.15
NUP58-209ENST00000476553 KDM4FA0A1W2PPD8 638 aa15.95■□□□□ 0.14
NUP58-209ENST00000476553 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
NUP58-209ENST00000476553 ADGRD1Q6QNK2 874 aa15.9■□□□□ 0.14
NUP58-209ENST00000476553 ARHGAP33O14559 1287 aa15.89■□□□□ 0.13
NUP58-209ENST00000476553 PTCD2Q8WV60 388 aaKnown RBP15.89■□□□□ 0.13
NUP58-209ENST00000476553 HCSTQ9UBK5 93 aa15.85■□□□□ 0.13
NUP58-209ENST00000476553 FOXK1P85037 733 aa15.84■□□□□ 0.13
NUP58-209ENST00000476553 TK2O00142 265 aa15.83■□□□□ 0.12
NUP58-209ENST00000476553 PLA2G2EQ9NZK7 142 aa15.82■□□□□ 0.12
NUP58-209ENST00000476553 HRO43593 1189 aa15.8■□□□□ 0.12
NUP58-209ENST00000476553 DMRTA1Q5VZB9 504 aa15.79■□□□□ 0.12
NUP58-209ENST00000476553 PLPP6Q8IY26 295 aa15.78■□□□□ 0.12
NUP58-209ENST00000476553 GPHNQ9NQX3 736 aaPredicted RBP15.78■□□□□ 0.12
NUP58-209ENST00000476553 PSEN2P49810 448 aa15.76■□□□□ 0.11
NUP58-209ENST00000476553 PPP4R3BQ5MIZ7 849 aa15.74■□□□□ 0.11
NUP58-209ENST00000476553 HS6ST3Q8IZP7 471 aa15.74■□□□□ 0.11
NUP58-209ENST00000476553 DSG2Q14126 1118 aa15.73■□□□□ 0.11
NUP58-209ENST00000476553 TBC1D12O60347 775 aa15.66■□□□□ 0.1
NUP58-209ENST00000476553 OXER1Q8TDS5 423 aa15.62■□□□□ 0.09
NUP58-209ENST00000476553 KCTD12Q96CX2 325 aaKnown RBP15.61■□□□□ 0.09
NUP58-209ENST00000476553 KCNK17Q96T54 332 aa15.61■□□□□ 0.09
NUP58-209ENST00000476553 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
NUP58-209ENST00000476553 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
NUP58-209ENST00000476553 VPS9D1Q9Y2B5 631 aa15.57■□□□□ 0.08
NUP58-209ENST00000476553 CRISPLD2Q9H0B8 497 aa15.56■□□□□ 0.08
NUP58-209ENST00000476553 NKX1-1Q15270 411 aaPredicted RBP15.53■□□□□ 0.08
NUP58-209ENST00000476553 SLC4A5Q9BY07 1137 aa15.53■□□□□ 0.08
NUP58-209ENST00000476553 STAC3Q96MF2 364 aa15.52■□□□□ 0.08
NUP58-209ENST00000476553 BCL2L12Q9HB09 334 aa15.52■□□□□ 0.08
NUP58-209ENST00000476553 UPF1Q92900 1129 aaKnown RBP eCLIP15.51■□□□□ 0.07
NUP58-209ENST00000476553 CHGAP10645 457 aaKnown RBP15.5■□□□□ 0.07
NUP58-209ENST00000476553 ZNF454Q8N9F8 522 aa15.5■□□□□ 0.07
NUP58-209ENST00000476553 PPP1R15BQ5SWA1 713 aa15.48■□□□□ 0.07
NUP58-209ENST00000476553 FOSBP53539 338 aa15.47■□□□□ 0.07
NUP58-209ENST00000476553 RYDENQ9NUL5 291 aaKnown RBP15.45■□□□□ 0.06
NUP58-209ENST00000476553 BHMG1C9JSJ3 638 aaPredicted RBP15.44■□□□□ 0.06
NUP58-209ENST00000476553 IFFO2Q5TF58 517 aa15.43■□□□□ 0.06
NUP58-209ENST00000476553 ZBED2Q9BTP6 218 aa15.42■□□□□ 0.06
NUP58-209ENST00000476553 NCKAP5LQ9HCH0 1330 aa15.42■□□□□ 0.06
NUP58-209ENST00000476553 PTPN5P54829 565 aa15.41■□□□□ 0.06
NUP58-209ENST00000476553 THSD4Q6ZMP0 1018 aa15.41■□□□□ 0.06
NUP58-209ENST00000476553 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
NUP58-209ENST00000476553 PTPREP23469 700 aa15.4■□□□□ 0.06
NUP58-209ENST00000476553 ANO8Q9HCE9 1232 aaPredicted RBP15.4■□□□□ 0.06
NUP58-209ENST00000476553 RGS20O76081 388 aa15.35■□□□□ 0.05
NUP58-209ENST00000476553 EVI5O60447 810 aa15.32■□□□□ 0.04
NUP58-209ENST00000476553 PDE4AP27815 886 aa15.32■□□□□ 0.04
NUP58-209ENST00000476553 ADAM33Q9BZ11 813 aa15.32■□□□□ 0.04
NUP58-209ENST00000476553 MRPL50Q8N5N7 158 aaKnown RBP15.31■□□□□ 0.04
NUP58-209ENST00000476553 WNT2BQ93097 391 aa15.31■□□□□ 0.04
NUP58-209ENST00000476553 ZDHHC16Q969W1 377 aa15.31■□□□□ 0.04
NUP58-209ENST00000476553 A0A0G2JS52 829 aa15.29■□□□□ 0.04
NUP58-209ENST00000476553 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
NUP58-209ENST00000476553 GOLGA8CPA6NN73 597 aa15.27■□□□□ 0.04
NUP58-209ENST00000476553 MFSD10Q14728 455 aa15.25■□□□□ 0.03
NUP58-209ENST00000476553 DDX27Q96GQ7 796 aaKnown RBP15.24■□□□□ 0.03
NUP58-209ENST00000476553 GTPBP6O43824 516 aaPredicted RBP15.23■□□□□ 0.03
NUP58-209ENST00000476553 PPP1R3GB7ZBB8 358 aa15.22■□□□□ 0.03
NUP58-209ENST00000476553 LARP6Q9BRS8 491 aaKnown RBP15.22■□□□□ 0.03
NUP58-209ENST00000476553 EMILIN3Q9NT22 766 aa15.19■□□□□ 0.02
NUP58-209ENST00000476553 PCDHGA10Q9Y5H3 936 aa15.18■□□□□ 0.02
NUP58-209ENST00000476553 MAP3K9P80192 1104 aa15.17■□□□□ 0.02
NUP58-209ENST00000476553 RABGEF1Q9UJ41 708 aa15.17■□□□□ 0.02
NUP58-209ENST00000476553 IRX2Q9BZI1 471 aaPredicted RBP15.16■□□□□ 0.02
NUP58-209ENST00000476553 ITGBL1O95965 494 aaPredicted RBP15.14■□□□□ 0.01
NUP58-209ENST00000476553 COL9A1P20849 921 aa15.14■□□□□ 0.01
NUP58-209ENST00000476553 PROX2Q3B8N5 592 aa15.14■□□□□ 0.01
NUP58-209ENST00000476553 ANKK1Q8NFD2 765 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms