RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 KANK4Q5T7N3 995 aaPredicted RBP33.02■■■□□ 2.88
MAP1LC3A-204ENST00000476428 ARHGAP5Q13017 1502 aa33.02■■■□□ 2.88
MAP1LC3A-204ENST00000476428 CFAP74Q9C0B2 1584 aa33.01■■■□□ 2.88
MAP1LC3A-204ENST00000476428 APLP2Q06481 763 aa33.01■■■□□ 2.87
MAP1LC3A-204ENST00000476428 DENND4BO75064 1496 aaPredicted RBP33■■■□□ 2.87
MAP1LC3A-204ENST00000476428 GPATCH8Q9UKJ3 1502 aaKnown RBP33■■■□□ 2.87
MAP1LC3A-204ENST00000476428 CCNB3Q8WWL7 1395 aa32.99■■■□□ 2.87
MAP1LC3A-204ENST00000476428 SCAPERQ9BY12 1400 aa32.99■■■□□ 2.87
MAP1LC3A-204ENST00000476428 LRRC9Q6ZRR7 1453 aa32.99■■■□□ 2.87
MAP1LC3A-204ENST00000476428 PREX2Q70Z35 1606 aa32.93■■■□□ 2.86
MAP1LC3A-204ENST00000476428 CFDP1Q9UEE9 299 aaPredicted RBP32.93■■■□□ 2.86
MAP1LC3A-204ENST00000476428 CDC42BPBQ9Y5S2 1711 aa32.92■■■□□ 2.86
MAP1LC3A-204ENST00000476428 ZNF777Q9ULD5 760 aaPredicted RBP32.92■■■□□ 2.86
MAP1LC3A-204ENST00000476428 NCOA2Q15596 1464 aa32.92■■■□□ 2.86
MAP1LC3A-204ENST00000476428 CDC42BPAQ5VT25 1732 aa32.89■■■□□ 2.86
MAP1LC3A-204ENST00000476428 FRMPD1Q5SYB0 1578 aa32.89■■■□□ 2.86
MAP1LC3A-204ENST00000476428 HECW2Q9P2P5 1572 aa32.87■■■□□ 2.85
MAP1LC3A-204ENST00000476428 POGZQ7Z3K3 1410 aa32.86■■■□□ 2.85
MAP1LC3A-204ENST00000476428 AFAP1Q8N556 730 aa32.84■■■□□ 2.85
MAP1LC3A-204ENST00000476428 SUPT6HQ7KZ85 1726 aaKnown RBP32.84■■■□□ 2.85
MAP1LC3A-204ENST00000476428 RICTORQ6R327 1708 aa32.82■■■□□ 2.84
MAP1LC3A-204ENST00000476428 ARHGEF12Q9NZN5 1544 aa32.82■■■□□ 2.84
MAP1LC3A-204ENST00000476428 ZNF644Q9H582 1327 aaPredicted RBP32.79■■■□□ 2.84
MAP1LC3A-204ENST00000476428 ABCC1P33527 1531 aa32.78■■■□□ 2.84
MAP1LC3A-204ENST00000476428 HNRNPMP52272 730 aaKnown RBP eCLIP32.78■■■□□ 2.84
MAP1LC3A-204ENST00000476428 TRAPPC8Q9Y2L5 1435 aa32.77■■■□□ 2.84
MAP1LC3A-204ENST00000476428 SAMD9LQ8IVG5 1584 aa32.77■■■□□ 2.84
MAP1LC3A-204ENST00000476428 ZNF518AQ6AHZ1 1483 aa32.76■■■□□ 2.84
MAP1LC3A-204ENST00000476428 ZMYM4Q5VZL5 1548 aa32.75■■■□□ 2.83
MAP1LC3A-204ENST00000476428 KIAA1107Q9UPP5 1409 aa32.75■■■□□ 2.83
MAP1LC3A-204ENST00000476428 MAGI2Q86UL8 1455 aa32.73■■■□□ 2.83
MAP1LC3A-204ENST00000476428 PLEKHH2Q8IVE3 1493 aa32.73■■■□□ 2.83
MAP1LC3A-204ENST00000476428 YEATS2Q9ULM3 1422 aa32.72■■■□□ 2.83
MAP1LC3A-204ENST00000476428 ITSN2Q9NZM3 1697 aa32.7■■■□□ 2.83
MAP1LC3A-204ENST00000476428 SYCP2Q9BX26 1530 aa32.68■■■□□ 2.82
MAP1LC3A-204ENST00000476428 MYT1LQ9UL68 1186 aa32.68■■■□□ 2.82
MAP1LC3A-204ENST00000476428 ZFYVE16Q7Z3T8 1539 aa32.67■■■□□ 2.82
MAP1LC3A-204ENST00000476428 KDM5CP41229 1560 aa32.66■■■□□ 2.82
MAP1LC3A-204ENST00000476428 MYOM3Q5VTT5 1437 aa32.66■■■□□ 2.82
MAP1LC3A-204ENST00000476428 ARHGEF40Q8TER5 1519 aa32.64■■■□□ 2.82
MAP1LC3A-204ENST00000476428 MBD5Q9P267 1494 aa32.62■■■□□ 2.81
MAP1LC3A-204ENST00000476428 MLH3Q9UHC1 1453 aa32.62■■■□□ 2.81
MAP1LC3A-204ENST00000476428 MIA2Q96PC5 1412 aa32.6■■■□□ 2.81
MAP1LC3A-204ENST00000476428 SPAG9O60271 1321 aaKnown RBP32.6■■■□□ 2.81
MAP1LC3A-204ENST00000476428 CAMSAP2Q08AD1 1489 aa32.6■■■□□ 2.81
MAP1LC3A-204ENST00000476428 ARID4BQ4LE39 1312 aaPredicted RBP32.59■■■□□ 2.81
MAP1LC3A-204ENST00000476428 ATP10AO60312 1499 aa32.59■■■□□ 2.81
MAP1LC3A-204ENST00000476428 RSPH4AQ5TD94 716 aa32.55■■■□□ 2.8
MAP1LC3A-204ENST00000476428 PPARGC1BQ86YN6 1023 aaKnown RBP32.55■■■□□ 2.8
MAP1LC3A-204ENST00000476428 C9orf84Q5VXU9 1444 aa32.51■■■□□ 2.8
MAP1LC3A-204ENST00000476428 FGD6Q6ZV73 1430 aa32.48■■■□□ 2.79
MAP1LC3A-204ENST00000476428 DIP2CQ9Y2E4 1556 aa32.47■■■□□ 2.79
MAP1LC3A-204ENST00000476428 CCDC141Q6ZP82 1450 aa32.47■■■□□ 2.79
MAP1LC3A-204ENST00000476428 KIDINS220Q9ULH0 1771 aa32.46■■■□□ 2.79
MAP1LC3A-204ENST00000476428 ABCA6Q8N139 1617 aa32.44■■■□□ 2.78
MAP1LC3A-204ENST00000476428 TSPY4P0CV99 314 aa32.44■■■□□ 2.78
MAP1LC3A-204ENST00000476428 TSPY10P0CW01 314 aa32.44■■■□□ 2.78
MAP1LC3A-204ENST00000476428 FBXO41Q8TF61 875 aa32.44■■■□□ 2.78
MAP1LC3A-204ENST00000476428 ATP7AQ04656 1500 aa32.43■■■□□ 2.78
MAP1LC3A-204ENST00000476428 RTEL1-TNFRSF6BF6WH68 1400 aa32.43■■■□□ 2.78
MAP1LC3A-204ENST00000476428 ARHGEF5Q12774 1597 aa32.42■■■□□ 2.78
MAP1LC3A-204ENST00000476428 MLECQ14165 292 aa32.42■■■□□ 2.78
MAP1LC3A-204ENST00000476428 SIGLEC1Q9BZZ2 1709 aa32.41■■■□□ 2.78
MAP1LC3A-204ENST00000476428 INO80Q9ULG1 1556 aaPredicted RBP32.4■■■□□ 2.78
MAP1LC3A-204ENST00000476428 TCOF1Q13428 1488 aaKnown RBP32.39■■■□□ 2.78
MAP1LC3A-204ENST00000476428 PTPN23Q9H3S7 1636 aa32.39■■■□□ 2.78
MAP1LC3A-204ENST00000476428 REREQ9P2R6 1566 aa32.36■■■□□ 2.77
MAP1LC3A-204ENST00000476428 BCORL1Q5H9F3 1711 aa32.35■■■□□ 2.77
MAP1LC3A-204ENST00000476428 FAM50AQ14320 339 aaKnown RBP32.34■■■□□ 2.77
MAP1LC3A-204ENST00000476428 ADAMTSL3P82987 1691 aa32.33■■■□□ 2.77
MAP1LC3A-204ENST00000476428 ABCC5O15440 1437 aa32.32■■■□□ 2.76
MAP1LC3A-204ENST00000476428 A2MP01023 1474 aa32.31■■■□□ 2.76
MAP1LC3A-204ENST00000476428 AGLP35573 1532 aa32.31■■■□□ 2.76
MAP1LC3A-204ENST00000476428 DHX29Q7Z478 1369 aaKnown RBP32.27■■■□□ 2.76
MAP1LC3A-204ENST00000476428 PTPRMP28827 1452 aa32.27■■■□□ 2.76
MAP1LC3A-204ENST00000476428 DAPK1P53355 1430 aa32.26■■■□□ 2.76
MAP1LC3A-204ENST00000476428 MAST1Q9Y2H9 1570 aa32.24■■■□□ 2.75
MAP1LC3A-204ENST00000476428 MADDQ8WXG6 1647 aa32.23■■■□□ 2.75
MAP1LC3A-204ENST00000476428 PLXNC1O60486 1568 aa32.21■■■□□ 2.75
MAP1LC3A-204ENST00000476428 CHIC2Q9UKJ5 165 aa32.2■■■□□ 2.75
MAP1LC3A-204ENST00000476428 DNMT1P26358 1616 aaKnown RBP32.19■■■□□ 2.74
MAP1LC3A-204ENST00000476428 ADGBQ8N7X0 1667 aa32.19■■■□□ 2.74
MAP1LC3A-204ENST00000476428 SHANK2Q9UPX8 1470 aa32.19■■■□□ 2.74
MAP1LC3A-204ENST00000476428 GGT6Q6P531 493 aa32.16■■■□□ 2.74
MAP1LC3A-204ENST00000476428 KIF3BO15066 747 aa32.15■■■□□ 2.74
MAP1LC3A-204ENST00000476428 RRP7BPQ9NSQ0 103 aa32.15■■■□□ 2.74
MAP1LC3A-204ENST00000476428 PLPPR3Q6T4P5 718 aa32.12■■■□□ 2.73
MAP1LC3A-204ENST00000476428 ESF1Q9H501 851 aaKnown RBP32.12■■■□□ 2.73
MAP1LC3A-204ENST00000476428 RIMS1Q86UR5 1692 aaKnown RBP32.11■■■□□ 2.73
MAP1LC3A-204ENST00000476428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.11■■■□□ 2.73
MAP1LC3A-204ENST00000476428 KIF15Q9NS87 1388 aa32.1■■■□□ 2.73
MAP1LC3A-204ENST00000476428 ANKRD30AQ9BXX3 1397 aa32.09■■■□□ 2.73
MAP1LC3A-204ENST00000476428 CROCC2H7BZ55 1655 aa32.09■■■□□ 2.73
MAP1LC3A-204ENST00000476428 PTPRKQ15262 1439 aa32.08■■■□□ 2.73
MAP1LC3A-204ENST00000476428 RRBP1Q9P2E9 1410 aaKnown RBP32.08■■■□□ 2.73
MAP1LC3A-204ENST00000476428 CEBPAP49715 358 aaPredicted RBP32.07■■■□□ 2.72
MAP1LC3A-204ENST00000476428 PPP6R1Q9UPN7 881 aa32.07■■■□□ 2.72
MAP1LC3A-204ENST00000476428 NCOA1Q15788 1441 aa32.07■■■□□ 2.72
MAP1LC3A-204ENST00000476428 FER1L4A9Z1Z3 1794 aa32.06■■■□□ 2.72
MAP1LC3A-204ENST00000476428 ITGAEP38570 1179 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms