RNA–Protein interactions for RNA: ENST00000476250.5

PGAP1-209, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 3

Gene PGAP1, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-209ENST00000476250 EFCAB3Q8N7B9 438 aa12.79□□□□□ -0.36
PGAP1-209ENST00000476250 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
PGAP1-209ENST00000476250 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
PGAP1-209ENST00000476250 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
PGAP1-209ENST00000476250 SOX12O15370 315 aa12.65□□□□□ -0.38
PGAP1-209ENST00000476250 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
PGAP1-209ENST00000476250 PBX2P40425 430 aa12.64□□□□□ -0.39
PGAP1-209ENST00000476250 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
PGAP1-209ENST00000476250 AXIN2Q9Y2T1 843 aa12.6□□□□□ -0.39
PGAP1-209ENST00000476250 NUDT7P0C024 238 aa12.55□□□□□ -0.4
PGAP1-209ENST00000476250 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
PGAP1-209ENST00000476250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
PGAP1-209ENST00000476250 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
PGAP1-209ENST00000476250 ADGRD1Q6QNK2 874 aa12.5□□□□□ -0.41
PGAP1-209ENST00000476250 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
PGAP1-209ENST00000476250 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
PGAP1-209ENST00000476250 LHX6Q9UPM6 363 aa12.49□□□□□ -0.41
PGAP1-209ENST00000476250 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.41
PGAP1-209ENST00000476250 RNF25Q96BH1 459 aaPredicted RBP12.46□□□□□ -0.41
PGAP1-209ENST00000476250 NLRP6P59044 892 aa12.44□□□□□ -0.42
PGAP1-209ENST00000476250 ARHGAP33O14559 1287 aa12.42□□□□□ -0.42
PGAP1-209ENST00000476250 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
PGAP1-209ENST00000476250 IRX2Q9BZI1 471 aaPredicted RBP12.42□□□□□ -0.42
PGAP1-209ENST00000476250 KIF3CO14782 793 aa12.41□□□□□ -0.42
PGAP1-209ENST00000476250 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
PGAP1-209ENST00000476250 PCDHGA4Q9Y5G9 962 aa12.4□□□□□ -0.42
PGAP1-209ENST00000476250 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
PGAP1-209ENST00000476250 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
PGAP1-209ENST00000476250 SLC34A2O95436 690 aa12.37□□□□□ -0.43
PGAP1-209ENST00000476250 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
PGAP1-209ENST00000476250 TK2O00142 265 aa12.34□□□□□ -0.43
PGAP1-209ENST00000476250 RGS20O76081 388 aa12.33□□□□□ -0.44
PGAP1-209ENST00000476250 HRO43593 1189 aa12.31□□□□□ -0.44
PGAP1-209ENST00000476250 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
PGAP1-209ENST00000476250 PSEN2P49810 448 aa12.29□□□□□ -0.44
PGAP1-209ENST00000476250 PTPN5P54829 565 aa12.29□□□□□ -0.44
PGAP1-209ENST00000476250 MFRPQ9BY79 579 aa12.28□□□□□ -0.44
PGAP1-209ENST00000476250 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
PGAP1-209ENST00000476250 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
PGAP1-209ENST00000476250 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
PGAP1-209ENST00000476250 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
PGAP1-209ENST00000476250 STK24Q9Y6E0 443 aa12.25□□□□□ -0.45
PGAP1-209ENST00000476250 KCNH8Q96L42 1107 aa12.22□□□□□ -0.45
PGAP1-209ENST00000476250 STK25O00506 426 aa12.2□□□□□ -0.46
PGAP1-209ENST00000476250 KDM4FA0A1W2PPD8 638 aa12.19□□□□□ -0.46
PGAP1-209ENST00000476250 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
PGAP1-209ENST00000476250 A0A0G2JS52 829 aa12.18□□□□□ -0.46
PGAP1-209ENST00000476250 RGL2O15211 777 aa12.18□□□□□ -0.46
PGAP1-209ENST00000476250 PKD2Q13563 968 aa12.18□□□□□ -0.46
PGAP1-209ENST00000476250 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
PGAP1-209ENST00000476250 KCNK17Q96T54 332 aa12.15□□□□□ -0.46
PGAP1-209ENST00000476250 Q6ZNB5 142 aa12.14□□□□□ -0.47
PGAP1-209ENST00000476250 PTCD2Q8WV60 388 aaKnown RBP12.13□□□□□ -0.47
PGAP1-209ENST00000476250 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
PGAP1-209ENST00000476250 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
PGAP1-209ENST00000476250 THSD4Q6ZMP0 1018 aa12.07□□□□□ -0.48
PGAP1-209ENST00000476250 TBC1D12O60347 775 aa12.03□□□□□ -0.48
PGAP1-209ENST00000476250 FOXK1P85037 733 aa12.02□□□□□ -0.49
PGAP1-209ENST00000476250 WNT2BQ93097 391 aa12.02□□□□□ -0.49
PGAP1-209ENST00000476250 PPP1R37O75864 691 aa12□□□□□ -0.49
PGAP1-209ENST00000476250 PLPP6Q8IY26 295 aa11.99□□□□□ -0.49
PGAP1-209ENST00000476250 MRPL50Q8N5N7 158 aaKnown RBP11.98□□□□□ -0.49
PGAP1-209ENST00000476250 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
PGAP1-209ENST00000476250 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
PGAP1-209ENST00000476250 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
PGAP1-209ENST00000476250 ZNF454Q8N9F8 522 aa11.93□□□□□ -0.5
PGAP1-209ENST00000476250 DSG2Q14126 1118 aa11.91□□□□□ -0.5
PGAP1-209ENST00000476250 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
PGAP1-209ENST00000476250 PTPREP23469 700 aa11.89□□□□□ -0.51
PGAP1-209ENST00000476250 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
PGAP1-209ENST00000476250 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
PGAP1-209ENST00000476250 LAPTM4AQ15012 233 aa11.86□□□□□ -0.51
PGAP1-209ENST00000476250 ZBED2Q9BTP6 218 aa11.86□□□□□ -0.51
PGAP1-209ENST00000476250 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
PGAP1-209ENST00000476250 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
PGAP1-209ENST00000476250 OXER1Q8TDS5 423 aa11.84□□□□□ -0.51
PGAP1-209ENST00000476250 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
PGAP1-209ENST00000476250 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
PGAP1-209ENST00000476250 ANKK1Q8NFD2 765 aa11.81□□□□□ -0.52
PGAP1-209ENST00000476250 FOSBP53539 338 aa11.79□□□□□ -0.52
PGAP1-209ENST00000476250 GFRA3O60609 400 aa11.78□□□□□ -0.52
PGAP1-209ENST00000476250 KCNC4Q03721 635 aa11.75□□□□□ -0.53
PGAP1-209ENST00000476250 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
PGAP1-209ENST00000476250 LCE2BO14633 110 aa11.73□□□□□ -0.53
PGAP1-209ENST00000476250 BCAMP50895 628 aa11.73□□□□□ -0.53
PGAP1-209ENST00000476250 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
PGAP1-209ENST00000476250 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
PGAP1-209ENST00000476250 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
PGAP1-209ENST00000476250 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
PGAP1-209ENST00000476250 ADAM33Q9BZ11 813 aa11.69□□□□□ -0.54
PGAP1-209ENST00000476250 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
PGAP1-209ENST00000476250 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
PGAP1-209ENST00000476250 CRISPLD2Q9H0B8 497 aa11.66□□□□□ -0.54
PGAP1-209ENST00000476250 PPP1R15BQ5SWA1 713 aa11.65□□□□□ -0.54
PGAP1-209ENST00000476250 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
PGAP1-209ENST00000476250 ZNF787Q6DD87 383 aa11.64□□□□□ -0.55
PGAP1-209ENST00000476250 WBP1LQ9NX94 342 aa11.64□□□□□ -0.55
PGAP1-209ENST00000476250 PPP1R3GB7ZBB8 358 aa11.63□□□□□ -0.55
PGAP1-209ENST00000476250 EVI5O60447 810 aa11.63□□□□□ -0.55
PGAP1-209ENST00000476250 PROX2Q3B8N5 592 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms