RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 DENND4BO75064 1496 aaPredicted RBP30.53■■■□□ 2.48
PDE6B-209ENST00000476034 EFCAB2Q5VUJ9 269 aa30.53■■■□□ 2.48
PDE6B-209ENST00000476034 ADGRL1O94910 1474 aa30.52■■■□□ 2.48
PDE6B-209ENST00000476034 MAP3K1Q13233 1512 aa30.5■■■□□ 2.47
PDE6B-209ENST00000476034 RAPGEF3O95398 923 aa30.49■■■□□ 2.47
PDE6B-209ENST00000476034 SUPT6HQ7KZ85 1726 aaKnown RBP30.46■■■□□ 2.47
PDE6B-209ENST00000476034 SCAPERQ9BY12 1400 aa30.45■■■□□ 2.46
PDE6B-209ENST00000476034 GPATCH8Q9UKJ3 1502 aaKnown RBP30.44■■■□□ 2.46
PDE6B-209ENST00000476034 ZMYM4Q5VZL5 1548 aa30.43■■■□□ 2.46
PDE6B-209ENST00000476034 POGZQ7Z3K3 1410 aa30.43■■■□□ 2.46
PDE6B-209ENST00000476034 ITSN2Q9NZM3 1697 aa30.42■■■□□ 2.46
PDE6B-209ENST00000476034 CCNB3Q8WWL7 1395 aa30.42■■■□□ 2.46
PDE6B-209ENST00000476034 LRRC9Q6ZRR7 1453 aa30.42■■■□□ 2.46
PDE6B-209ENST00000476034 ABCC1P33527 1531 aa30.4■■■□□ 2.46
PDE6B-209ENST00000476034 ARHGEF40Q8TER5 1519 aa30.37■■■□□ 2.45
PDE6B-209ENST00000476034 NCOA2Q15596 1464 aa30.37■■■□□ 2.45
PDE6B-209ENST00000476034 ZNF518AQ6AHZ1 1483 aa30.36■■■□□ 2.45
PDE6B-209ENST00000476034 SAMD9LQ8IVG5 1584 aa30.36■■■□□ 2.45
PDE6B-209ENST00000476034 MAGI2Q86UL8 1455 aa30.33■■■□□ 2.45
PDE6B-209ENST00000476034 KDM5CP41229 1560 aa30.32■■■□□ 2.45
PDE6B-209ENST00000476034 APLP2Q06481 763 aa30.32■■■□□ 2.44
PDE6B-209ENST00000476034 ZFYVE16Q7Z3T8 1539 aa30.32■■■□□ 2.44
PDE6B-209ENST00000476034 CFDP1Q9UEE9 299 aaPredicted RBP30.31■■■□□ 2.44
PDE6B-209ENST00000476034 ARHGEF12Q9NZN5 1544 aa30.3■■■□□ 2.44
PDE6B-209ENST00000476034 PLEKHH2Q8IVE3 1493 aa30.28■■■□□ 2.44
PDE6B-209ENST00000476034 SYCP2Q9BX26 1530 aa30.27■■■□□ 2.44
PDE6B-209ENST00000476034 KANK4Q5T7N3 995 aaPredicted RBP30.27■■■□□ 2.44
PDE6B-209ENST00000476034 ZNF777Q9ULD5 760 aaPredicted RBP30.27■■■□□ 2.44
PDE6B-209ENST00000476034 HECW2Q9P2P5 1572 aa30.25■■■□□ 2.43
PDE6B-209ENST00000476034 KIAA1107Q9UPP5 1409 aa30.24■■■□□ 2.43
PDE6B-209ENST00000476034 TRAPPC8Q9Y2L5 1435 aa30.23■■■□□ 2.43
PDE6B-209ENST00000476034 YEATS2Q9ULM3 1422 aa30.22■■■□□ 2.43
PDE6B-209ENST00000476034 AFAP1Q8N556 730 aa30.22■■■□□ 2.43
PDE6B-209ENST00000476034 KDM4FA0A1W2PPD8 638 aa30.2■■■□□ 2.43
PDE6B-209ENST00000476034 MLH3Q9UHC1 1453 aa30.19■■■□□ 2.42
PDE6B-209ENST00000476034 AEBP2Q6ZN18 517 aaPredicted RBP30.17■■■□□ 2.42
PDE6B-209ENST00000476034 ATP10AO60312 1499 aa30.14■■■□□ 2.42
PDE6B-209ENST00000476034 CAMSAP2Q08AD1 1489 aa30.14■■■□□ 2.42
PDE6B-209ENST00000476034 DIP2CQ9Y2E4 1556 aa30.14■■■□□ 2.42
PDE6B-209ENST00000476034 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
PDE6B-209ENST00000476034 HNRNPMP52272 730 aaKnown RBP eCLIP30.13■■■□□ 2.41
PDE6B-209ENST00000476034 ABCA6Q8N139 1617 aa30.13■■■□□ 2.41
PDE6B-209ENST00000476034 ZNF644Q9H582 1327 aaPredicted RBP30.13■■■□□ 2.41
PDE6B-209ENST00000476034 MYOM3Q5VTT5 1437 aa30.13■■■□□ 2.41
PDE6B-209ENST00000476034 BCORL1Q5H9F3 1711 aa30.12■■■□□ 2.41
PDE6B-209ENST00000476034 SIGLEC1Q9BZZ2 1709 aa30.12■■■□□ 2.41
PDE6B-209ENST00000476034 C9orf84Q5VXU9 1444 aa30.12■■■□□ 2.41
PDE6B-209ENST00000476034 MYT1LQ9UL68 1186 aa30.1■■■□□ 2.41
PDE6B-209ENST00000476034 MBD5Q9P267 1494 aa30.1■■■□□ 2.41
PDE6B-209ENST00000476034 INO80Q9ULG1 1556 aaPredicted RBP30.09■■■□□ 2.41
PDE6B-209ENST00000476034 REREQ9P2R6 1566 aa30.08■■■□□ 2.41
PDE6B-209ENST00000476034 MIA2Q96PC5 1412 aa30.08■■■□□ 2.41
PDE6B-209ENST00000476034 ARID4BQ4LE39 1312 aaPredicted RBP30.08■■■□□ 2.41
PDE6B-209ENST00000476034 ADAMTSL3P82987 1691 aa30.07■■■□□ 2.41
PDE6B-209ENST00000476034 ATP7AQ04656 1500 aa30.06■■■□□ 2.4
PDE6B-209ENST00000476034 SPAG9O60271 1321 aaKnown RBP30.05■■■□□ 2.4
PDE6B-209ENST00000476034 ARHGEF5Q12774 1597 aa30.04■■■□□ 2.4
PDE6B-209ENST00000476034 CCDC141Q6ZP82 1450 aa30.03■■■□□ 2.4
PDE6B-209ENST00000476034 MADDQ8WXG6 1647 aa29.98■■■□□ 2.39
PDE6B-209ENST00000476034 RSPH4AQ5TD94 716 aa29.98■■■□□ 2.39
PDE6B-209ENST00000476034 PTPN23Q9H3S7 1636 aa29.97■■■□□ 2.39
PDE6B-209ENST00000476034 AGLP35573 1532 aa29.96■■■□□ 2.39
PDE6B-209ENST00000476034 RTEL1-TNFRSF6BF6WH68 1400 aa29.96■■■□□ 2.39
PDE6B-209ENST00000476034 ADGBQ8N7X0 1667 aa29.95■■■□□ 2.39
PDE6B-209ENST00000476034 FGD6Q6ZV73 1430 aa29.94■■■□□ 2.38
PDE6B-209ENST00000476034 FER1L4A9Z1Z3 1794 aa29.91■■■□□ 2.38
PDE6B-209ENST00000476034 PLXNC1O60486 1568 aa29.9■■■□□ 2.38
PDE6B-209ENST00000476034 TCOF1Q13428 1488 aaKnown RBP29.9■■■□□ 2.38
PDE6B-209ENST00000476034 RIMS1Q86UR5 1692 aaKnown RBP29.9■■■□□ 2.38
PDE6B-209ENST00000476034 MAST1Q9Y2H9 1570 aa29.89■■■□□ 2.38
PDE6B-209ENST00000476034 A2MP01023 1474 aa29.88■■■□□ 2.37
PDE6B-209ENST00000476034 PTPRMP28827 1452 aa29.87■■■□□ 2.37
PDE6B-209ENST00000476034 CROCC2H7BZ55 1655 aa29.86■■■□□ 2.37
PDE6B-209ENST00000476034 MLECQ14165 292 aa29.86■■■□□ 2.37
PDE6B-209ENST00000476034 TSPY4P0CV99 314 aa29.85■■■□□ 2.37
PDE6B-209ENST00000476034 TSPY10P0CW01 314 aa29.85■■■□□ 2.37
PDE6B-209ENST00000476034 DNMT1P26358 1616 aaKnown RBP29.83■■■□□ 2.37
PDE6B-209ENST00000476034 SHANK2Q9UPX8 1470 aa29.8■■■□□ 2.36
PDE6B-209ENST00000476034 ABCC5O15440 1437 aa29.76■■■□□ 2.35
PDE6B-209ENST00000476034 DAPK1P53355 1430 aa29.76■■■□□ 2.35
PDE6B-209ENST00000476034 DHX29Q7Z478 1369 aaKnown RBP29.76■■■□□ 2.35
PDE6B-209ENST00000476034 PPARGC1BQ86YN6 1023 aaKnown RBP29.72■■■□□ 2.35
PDE6B-209ENST00000476034 FAM50AQ14320 339 aaKnown RBP29.67■■■□□ 2.34
PDE6B-209ENST00000476034 CNTLNQ9NXG0 1405 aa29.67■■■□□ 2.34
PDE6B-209ENST00000476034 MROH2AA6NES4 1674 aa29.66■■■□□ 2.34
PDE6B-209ENST00000476034 ESF1Q9H501 851 aaKnown RBP29.66■■■□□ 2.34
PDE6B-209ENST00000476034 EIF2AK4Q9P2K8 1649 aaKnown RBP29.66■■■□□ 2.34
PDE6B-209ENST00000476034 DUOX2Q9NRD8 1548 aa29.65■■■□□ 2.34
PDE6B-209ENST00000476034 C3P01024 1663 aa29.63■■■□□ 2.33
PDE6B-209ENST00000476034 CLTCQ00610 1675 aaKnown RBP29.63■■■□□ 2.33
PDE6B-209ENST00000476034 KIF3BO15066 747 aa29.6■■■□□ 2.33
PDE6B-209ENST00000476034 GGT6Q6P531 493 aa29.6■■■□□ 2.33
PDE6B-209ENST00000476034 KIF15Q9NS87 1388 aa29.6■■■□□ 2.33
PDE6B-209ENST00000476034 RNF17Q9BXT8 1623 aaKnown RBP29.6■■■□□ 2.33
PDE6B-209ENST00000476034 PPP6R1Q9UPN7 881 aa29.59■■■□□ 2.33
PDE6B-209ENST00000476034 ADGRL2O95490 1459 aa29.59■■■□□ 2.33
PDE6B-209ENST00000476034 FAM135AQ9P2D6 1515 aa29.59■■■□□ 2.33
PDE6B-209ENST00000476034 PLPPR3Q6T4P5 718 aa29.58■■■□□ 2.33
PDE6B-209ENST00000476034 ANKRD30AQ9BXX3 1397 aa29.58■■■□□ 2.33
PDE6B-209ENST00000476034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms