RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 PLCH2O75038 1416 aa23.79■■□□□ 1.4
SNX13-207ENST00000475800 APLP2Q06481 763 aa23.79■■□□□ 1.4
SNX13-207ENST00000475800 AKNAQ7Z591 1439 aa23.76■■□□□ 1.39
SNX13-207ENST00000475800 FANCAO15360 1455 aa23.76■■□□□ 1.39
SNX13-207ENST00000475800 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
SNX13-207ENST00000475800 DENND4BO75064 1496 aaPredicted RBP23.75■■□□□ 1.39
SNX13-207ENST00000475800 SUPT6HQ7KZ85 1726 aaKnown RBP23.74■■□□□ 1.39
SNX13-207ENST00000475800 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
SNX13-207ENST00000475800 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
SNX13-207ENST00000475800 CDC42BPAQ5VT25 1732 aa23.72■■□□□ 1.39
SNX13-207ENST00000475800 CDC42BPBQ9Y5S2 1711 aa23.71■■□□□ 1.39
SNX13-207ENST00000475800 PTPRMP28827 1452 aa23.71■■□□□ 1.39
SNX13-207ENST00000475800 EFCAB2Q5VUJ9 269 aa23.71■■□□□ 1.39
SNX13-207ENST00000475800 ADAMTSL3P82987 1691 aa23.7■■□□□ 1.39
SNX13-207ENST00000475800 ARHGAP5Q13017 1502 aa23.7■■□□□ 1.38
SNX13-207ENST00000475800 RICTORQ6R327 1708 aa23.69■■□□□ 1.38
SNX13-207ENST00000475800 CCNB3Q8WWL7 1395 aa23.68■■□□□ 1.38
SNX13-207ENST00000475800 MADDQ8WXG6 1647 aa23.68■■□□□ 1.38
SNX13-207ENST00000475800 BCORL1Q5H9F3 1711 aa23.67■■□□□ 1.38
SNX13-207ENST00000475800 ITSN2Q9NZM3 1697 aa23.67■■□□□ 1.38
SNX13-207ENST00000475800 ARHGEF40Q8TER5 1519 aa23.66■■□□□ 1.38
SNX13-207ENST00000475800 MLECQ14165 292 aa23.66■■□□□ 1.38
SNX13-207ENST00000475800 GPATCH8Q9UKJ3 1502 aaKnown RBP23.65■■□□□ 1.38
SNX13-207ENST00000475800 NCOA2Q15596 1464 aa23.65■■□□□ 1.38
SNX13-207ENST00000475800 YEATS2Q9ULM3 1422 aa23.64■■□□□ 1.37
SNX13-207ENST00000475800 SCAPERQ9BY12 1400 aa23.62■■□□□ 1.37
SNX13-207ENST00000475800 KANK4Q5T7N3 995 aaPredicted RBP23.62■■□□□ 1.37
SNX13-207ENST00000475800 RIMS1Q86UR5 1692 aaKnown RBP23.61■■□□□ 1.37
SNX13-207ENST00000475800 ZFYVE16Q7Z3T8 1539 aa23.59■■□□□ 1.37
SNX13-207ENST00000475800 CFDP1Q9UEE9 299 aaPredicted RBP23.59■■□□□ 1.37
SNX13-207ENST00000475800 SIGLEC1Q9BZZ2 1709 aa23.57■■□□□ 1.36
SNX13-207ENST00000475800 PLEKHH2Q8IVE3 1493 aa23.56■■□□□ 1.36
SNX13-207ENST00000475800 MYT1LQ9UL68 1186 aa23.56■■□□□ 1.36
SNX13-207ENST00000475800 ABCC1P33527 1531 aa23.55■■□□□ 1.36
SNX13-207ENST00000475800 ZMYM4Q5VZL5 1548 aa23.55■■□□□ 1.36
SNX13-207ENST00000475800 POGZQ7Z3K3 1410 aa23.55■■□□□ 1.36
SNX13-207ENST00000475800 SAMD9LQ8IVG5 1584 aa23.53■■□□□ 1.36
SNX13-207ENST00000475800 ZNF518AQ6AHZ1 1483 aa23.52■■□□□ 1.36
SNX13-207ENST00000475800 ZNF777Q9ULD5 760 aaPredicted RBP23.52■■□□□ 1.36
SNX13-207ENST00000475800 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
SNX13-207ENST00000475800 HSPA2P54652 639 aa23.5■■□□□ 1.35
SNX13-207ENST00000475800 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
SNX13-207ENST00000475800 AFAP1Q8N556 730 aa23.49■■□□□ 1.35
SNX13-207ENST00000475800 MAGI2Q86UL8 1455 aa23.49■■□□□ 1.35
SNX13-207ENST00000475800 MIA2Q96PC5 1412 aa23.48■■□□□ 1.35
SNX13-207ENST00000475800 LMTK3Q96Q04 1460 aa23.47■■□□□ 1.35
SNX13-207ENST00000475800 SYCP2Q9BX26 1530 aa23.47■■□□□ 1.35
SNX13-207ENST00000475800 KDM5CP41229 1560 aa23.47■■□□□ 1.35
SNX13-207ENST00000475800 ARHGEF12Q9NZN5 1544 aa23.46■■□□□ 1.35
SNX13-207ENST00000475800 FER1L4A9Z1Z3 1794 aa23.44■■□□□ 1.34
SNX13-207ENST00000475800 ATP10AO60312 1499 aa23.43■■□□□ 1.34
SNX13-207ENST00000475800 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
SNX13-207ENST00000475800 TRAPPC8Q9Y2L5 1435 aa23.42■■□□□ 1.34
SNX13-207ENST00000475800 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
SNX13-207ENST00000475800 CEBPAP49715 358 aaPredicted RBP23.4■■□□□ 1.34
SNX13-207ENST00000475800 RSPH4AQ5TD94 716 aa23.4■■□□□ 1.34
SNX13-207ENST00000475800 ZNF644Q9H582 1327 aaPredicted RBP23.39■■□□□ 1.34
SNX13-207ENST00000475800 MLH3Q9UHC1 1453 aa23.39■■□□□ 1.34
SNX13-207ENST00000475800 HNRNPMP52272 730 aaKnown RBP eCLIP23.39■■□□□ 1.338e-7■■■■■ 42.1
SNX13-207ENST00000475800 MBD5Q9P267 1494 aa23.37■■□□□ 1.33
SNX13-207ENST00000475800 ARHGEF5Q12774 1597 aa23.36■■□□□ 1.33
SNX13-207ENST00000475800 FGD6Q6ZV73 1430 aa23.36■■□□□ 1.33
SNX13-207ENST00000475800 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
SNX13-207ENST00000475800 CCDC141Q6ZP82 1450 aa23.35■■□□□ 1.33
SNX13-207ENST00000475800 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.33
SNX13-207ENST00000475800 KIDINS220Q9ULH0 1771 aa23.33■■□□□ 1.33
SNX13-207ENST00000475800 TCOF1Q13428 1488 aaKnown RBP23.32■■□□□ 1.32
SNX13-207ENST00000475800 FBXO41Q8TF61 875 aa23.32■■□□□ 1.32
SNX13-207ENST00000475800 DIP2CQ9Y2E4 1556 aa23.31■■□□□ 1.32
SNX13-207ENST00000475800 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
SNX13-207ENST00000475800 ATP7AQ04656 1500 aa23.3■■□□□ 1.32
SNX13-207ENST00000475800 ABCA6Q8N139 1617 aa23.3■■□□□ 1.32
SNX13-207ENST00000475800 RTEL1-TNFRSF6BF6WH68 1400 aa23.29■■□□□ 1.32
SNX13-207ENST00000475800 REREQ9P2R6 1566 aa23.27■■□□□ 1.32
SNX13-207ENST00000475800 TSPY4P0CV99 314 aa23.26■■□□□ 1.31
SNX13-207ENST00000475800 TSPY10P0CW01 314 aa23.26■■□□□ 1.31
SNX13-207ENST00000475800 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
SNX13-207ENST00000475800 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
SNX13-207ENST00000475800 MAST1Q9Y2H9 1570 aa23.23■■□□□ 1.31
SNX13-207ENST00000475800 DNMT1P26358 1616 aaKnown RBP23.23■■□□□ 1.31
SNX13-207ENST00000475800 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
SNX13-207ENST00000475800 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
SNX13-207ENST00000475800 SHANK2Q9UPX8 1470 aa23.21■■□□□ 1.31
SNX13-207ENST00000475800 PREX1Q8TCU6 1659 aa23.21■■□□□ 1.31
SNX13-207ENST00000475800 AGLP35573 1532 aa23.18■■□□□ 1.3
SNX13-207ENST00000475800 DAPK1P53355 1430 aa23.18■■□□□ 1.3
SNX13-207ENST00000475800 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
SNX13-207ENST00000475800 ABCC5O15440 1437 aa23.17■■□□□ 1.3
SNX13-207ENST00000475800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.3
SNX13-207ENST00000475800 A2MP01023 1474 aa23.17■■□□□ 1.3
SNX13-207ENST00000475800 UHRF1BP1Q6BDS2 1440 aa23.16■■□□□ 1.3
SNX13-207ENST00000475800 C3P01024 1663 aa23.16■■□□□ 1.3
SNX13-207ENST00000475800 PLXNC1O60486 1568 aa23.15■■□□□ 1.3
SNX13-207ENST00000475800 RRBP1Q9P2E9 1410 aaKnown RBP23.13■■□□□ 1.29
SNX13-207ENST00000475800 CERKQ8TCT0 537 aa23.12■■□□□ 1.29
SNX13-207ENST00000475800 DHX29Q7Z478 1369 aaKnown RBP23.11■■□□□ 1.29
SNX13-207ENST00000475800 SETD1BQ9UPS6 1966 aaKnown RBP23.1■■□□□ 1.29
SNX13-207ENST00000475800 STRCQ7RTU9 1775 aa23.07■■□□□ 1.28
SNX13-207ENST00000475800 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
SNX13-207ENST00000475800 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms