RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 FANCAO15360 1455 aa34.5■■■■□ 3.11
MCF2L2-209ENST00000475664 ARHGAP5Q13017 1502 aa34.5■■■■□ 3.11
MCF2L2-209ENST00000475664 NEO1Q92859 1461 aa34.48■■■■□ 3.11
MCF2L2-209ENST00000475664 PPARGC1BQ86YN6 1023 aaKnown RBP34.43■■■■□ 3.1
MCF2L2-209ENST00000475664 MYOM3Q5VTT5 1437 aa34.42■■■■□ 3.1
MCF2L2-209ENST00000475664 PHLDB1Q86UU1 1377 aa34.42■■■■□ 3.1
MCF2L2-209ENST00000475664 EFCAB2Q5VUJ9 269 aa34.42■■■■□ 3.1
MCF2L2-209ENST00000475664 AKNAQ7Z591 1439 aa34.39■■■■□ 3.1
MCF2L2-209ENST00000475664 CFDP1Q9UEE9 299 aaPredicted RBP34.38■■■■□ 3.09
MCF2L2-209ENST00000475664 SAMD9LQ8IVG5 1584 aa34.37■■■■□ 3.09
MCF2L2-209ENST00000475664 MIA2Q96PC5 1412 aa34.33■■■■□ 3.09
MCF2L2-209ENST00000475664 KDM6BO15054 1643 aa34.33■■■■□ 3.09
MCF2L2-209ENST00000475664 ABCC1P33527 1531 aa34.32■■■■□ 3.08
MCF2L2-209ENST00000475664 ADGRL1O94910 1474 aa34.32■■■■□ 3.08
MCF2L2-209ENST00000475664 COL17A1Q9UMD9 1497 aaPredicted RBP34.31■■■■□ 3.08
MCF2L2-209ENST00000475664 ZNF777Q9ULD5 760 aaPredicted RBP34.28■■■■□ 3.08
MCF2L2-209ENST00000475664 FGD6Q6ZV73 1430 aa34.28■■■■□ 3.08
MCF2L2-209ENST00000475664 CAMSAP2Q08AD1 1489 aa34.26■■■■□ 3.07
MCF2L2-209ENST00000475664 PLEKHH2Q8IVE3 1493 aa34.26■■■■□ 3.07
MCF2L2-209ENST00000475664 SCAPERQ9BY12 1400 aa34.25■■■■□ 3.07
MCF2L2-209ENST00000475664 PTPN23Q9H3S7 1636 aa34.24■■■■□ 3.07
MCF2L2-209ENST00000475664 ZNF644Q9H582 1327 aaPredicted RBP34.24■■■■□ 3.07
MCF2L2-209ENST00000475664 ARHGEF12Q9NZN5 1544 aa34.24■■■■□ 3.07
MCF2L2-209ENST00000475664 DENND4BO75064 1496 aaPredicted RBP34.23■■■■□ 3.07
MCF2L2-209ENST00000475664 RICTORQ6R327 1708 aa34.23■■■■□ 3.07
MCF2L2-209ENST00000475664 SYCP2Q9BX26 1530 aa34.23■■■■□ 3.07
MCF2L2-209ENST00000475664 KIAA1107Q9UPP5 1409 aa34.22■■■■□ 3.07
MCF2L2-209ENST00000475664 FRMPD1Q5SYB0 1578 aa34.22■■■■□ 3.07
MCF2L2-209ENST00000475664 TCOF1Q13428 1488 aaKnown RBP34.2■■■■□ 3.06
MCF2L2-209ENST00000475664 POGZQ7Z3K3 1410 aa34.19■■■■□ 3.06
MCF2L2-209ENST00000475664 MBD5Q9P267 1494 aa34.15■■■■□ 3.06
MCF2L2-209ENST00000475664 TRAPPC8Q9Y2L5 1435 aa34.14■■■■□ 3.06
MCF2L2-209ENST00000475664 RAPGEF3O95398 923 aa34.13■■■■□ 3.05
MCF2L2-209ENST00000475664 ZNF518AQ6AHZ1 1483 aa34.13■■■■□ 3.05
MCF2L2-209ENST00000475664 HNRNPMP52272 730 aaKnown RBP eCLIP34.12■■■■□ 3.05
MCF2L2-209ENST00000475664 KDM5CP41229 1560 aa34.11■■■■□ 3.05
MCF2L2-209ENST00000475664 ARHGEF5Q12774 1597 aa34.11■■■■□ 3.05
MCF2L2-209ENST00000475664 ZMYM4Q5VZL5 1548 aa34.1■■■■□ 3.05
MCF2L2-209ENST00000475664 RRBP1Q9P2E9 1410 aaKnown RBP34.09■■■■□ 3.05
MCF2L2-209ENST00000475664 CCDC141Q6ZP82 1450 aa34.06■■■■□ 3.04
MCF2L2-209ENST00000475664 AFAP1Q8N556 730 aa34.05■■■■□ 3.04
MCF2L2-209ENST00000475664 DNMT1P26358 1616 aaKnown RBP34.03■■■■□ 3.04
MCF2L2-209ENST00000475664 HECW2Q9P2P5 1572 aa34.01■■■■□ 3.03
MCF2L2-209ENST00000475664 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34■■■■□ 3.03
MCF2L2-209ENST00000475664 FAM50AQ14320 339 aaKnown RBP34■■■■□ 3.03
MCF2L2-209ENST00000475664 RSPH4AQ5TD94 716 aa34■■■■□ 3.03
MCF2L2-209ENST00000475664 CROCC2H7BZ55 1655 aa33.99■■■■□ 3.03
MCF2L2-209ENST00000475664 MLH3Q9UHC1 1453 aa33.98■■■■□ 3.03
MCF2L2-209ENST00000475664 INO80Q9ULG1 1556 aaPredicted RBP33.98■■■■□ 3.03
MCF2L2-209ENST00000475664 MAGI2Q86UL8 1455 aa33.97■■■■□ 3.03
MCF2L2-209ENST00000475664 ABCC5O15440 1437 aa33.96■■■■□ 3.03
MCF2L2-209ENST00000475664 DAPK1P53355 1430 aa33.96■■■■□ 3.03
MCF2L2-209ENST00000475664 KIDINS220Q9ULH0 1771 aa33.95■■■■□ 3.03
MCF2L2-209ENST00000475664 ZFYVE16Q7Z3T8 1539 aa33.94■■■■□ 3.02
MCF2L2-209ENST00000475664 MAST1Q9Y2H9 1570 aa33.94■■■■□ 3.02
MCF2L2-209ENST00000475664 ATP7AQ04656 1500 aa33.93■■■■□ 3.02
MCF2L2-209ENST00000475664 ARHGEF40Q8TER5 1519 aa33.93■■■■□ 3.02
MCF2L2-209ENST00000475664 SPAG9O60271 1321 aaKnown RBP33.92■■■■□ 3.02
MCF2L2-209ENST00000475664 SHANK2Q9UPX8 1470 aa33.92■■■■□ 3.02
MCF2L2-209ENST00000475664 YEATS2Q9ULM3 1422 aa33.9■■■■□ 3.02
MCF2L2-209ENST00000475664 RTEL1-TNFRSF6BF6WH68 1400 aa33.88■■■■□ 3.01
MCF2L2-209ENST00000475664 ABCA6Q8N139 1617 aa33.88■■■■□ 3.01
MCF2L2-209ENST00000475664 C9orf84Q5VXU9 1444 aa33.87■■■■□ 3.01
MCF2L2-209ENST00000475664 DIP2CQ9Y2E4 1556 aa33.86■■■■□ 3.01
MCF2L2-209ENST00000475664 TSPY4P0CV99 314 aa33.85■■■■□ 3.01
MCF2L2-209ENST00000475664 TSPY10P0CW01 314 aa33.85■■■■□ 3.01
MCF2L2-209ENST00000475664 PTPRKQ15262 1439 aa33.81■■■■□ 3
MCF2L2-209ENST00000475664 MYT1LQ9UL68 1186 aa33.81■■■■□ 3
MCF2L2-209ENST00000475664 PLXNC1O60486 1568 aa33.8■■■■□ 3
MCF2L2-209ENST00000475664 ADGBQ8N7X0 1667 aa33.8■■■■□ 3
MCF2L2-209ENST00000475664 ATP10AO60312 1499 aa33.77■■■■□ 3
MCF2L2-209ENST00000475664 ADGRL2O95490 1459 aa33.76■■■■□ 3
MCF2L2-209ENST00000475664 REREQ9P2R6 1566 aa33.76■■■□□ 2.99
MCF2L2-209ENST00000475664 ITGAEP38570 1179 aa33.72■■■□□ 2.99
MCF2L2-209ENST00000475664 SIGLEC1Q9BZZ2 1709 aa33.72■■■□□ 2.99
MCF2L2-209ENST00000475664 CHIC2Q9UKJ5 165 aa33.71■■■□□ 2.99
MCF2L2-209ENST00000475664 NCOA1Q15788 1441 aa33.69■■■□□ 2.98
MCF2L2-209ENST00000475664 A2MP01023 1474 aa33.69■■■□□ 2.98
MCF2L2-209ENST00000475664 ANKRD30AQ9BXX3 1397 aa33.68■■■□□ 2.98
MCF2L2-209ENST00000475664 ROCK1Q13464 1354 aa33.67■■■□□ 2.98
MCF2L2-209ENST00000475664 KIF15Q9NS87 1388 aa33.64■■■□□ 2.98
MCF2L2-209ENST00000475664 DUOX2Q9NRD8 1548 aa33.63■■■□□ 2.97
MCF2L2-209ENST00000475664 AGLP35573 1532 aa33.62■■■□□ 2.97
MCF2L2-209ENST00000475664 DHX29Q7Z478 1369 aaKnown RBP33.61■■■□□ 2.97
MCF2L2-209ENST00000475664 RRP7BPQ9NSQ0 103 aa33.6■■■□□ 2.97
MCF2L2-209ENST00000475664 BCORL1Q5H9F3 1711 aa33.56■■■□□ 2.96
MCF2L2-209ENST00000475664 EIF2AK4Q9P2K8 1649 aaKnown RBP33.55■■■□□ 2.96
MCF2L2-209ENST00000475664 ERBINQ96RT1 1412 aa33.53■■■□□ 2.96
MCF2L2-209ENST00000475664 GCC2Q8IWJ2 1684 aa33.52■■■□□ 2.96
MCF2L2-209ENST00000475664 ARID4BQ4LE39 1312 aaPredicted RBP33.51■■■□□ 2.95
MCF2L2-209ENST00000475664 HFM1A2PYH4 1435 aa33.47■■■□□ 2.95
MCF2L2-209ENST00000475664 NAIPQ13075 1403 aa33.47■■■□□ 2.95
MCF2L2-209ENST00000475664 ANKRD50Q9ULJ7 1429 aa33.47■■■□□ 2.95
MCF2L2-209ENST00000475664 RNF17Q9BXT8 1623 aaKnown RBP33.46■■■□□ 2.95
MCF2L2-209ENST00000475664 TRIM26Q12899 539 aaPredicted RBP33.44■■■□□ 2.94
MCF2L2-209ENST00000475664 KIF3BO15066 747 aa33.42■■■□□ 2.94
MCF2L2-209ENST00000475664 ADAMTSL3P82987 1691 aa33.41■■■□□ 2.94
MCF2L2-209ENST00000475664 DEPDC5O75140 1603 aa33.4■■■□□ 2.94
MCF2L2-209ENST00000475664 MROH1Q8NDA8 1641 aa33.39■■■□□ 2.93
MCF2L2-209ENST00000475664 MLECQ14165 292 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms