RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 VPS8Q8N3P4 1428 aa20.94■□□□□ 0.94
NIPAL3-206ENST00000475663 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
NIPAL3-206ENST00000475663 AFAP1Q8N556 730 aa20.91■□□□□ 0.94
NIPAL3-206ENST00000475663 RICTORQ6R327 1708 aa20.9■□□□□ 0.94
NIPAL3-206ENST00000475663 POGZQ7Z3K3 1410 aa20.9■□□□□ 0.94
NIPAL3-206ENST00000475663 YEATS2Q9ULM3 1422 aa20.9■□□□□ 0.94
NIPAL3-206ENST00000475663 CDC42BPBQ9Y5S2 1711 aa20.89■□□□□ 0.93
NIPAL3-206ENST00000475663 ARID4BQ4LE39 1312 aaPredicted RBP20.88■□□□□ 0.93
NIPAL3-206ENST00000475663 PREX2Q70Z35 1606 aa20.88■□□□□ 0.93
NIPAL3-206ENST00000475663 GPATCH8Q9UKJ3 1502 aaKnown RBP20.88■□□□□ 0.93
NIPAL3-206ENST00000475663 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
NIPAL3-206ENST00000475663 ARHGEF12Q9NZN5 1544 aa20.86■□□□□ 0.93
NIPAL3-206ENST00000475663 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
NIPAL3-206ENST00000475663 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
NIPAL3-206ENST00000475663 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
NIPAL3-206ENST00000475663 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
NIPAL3-206ENST00000475663 TRAPPC8Q9Y2L5 1435 aa20.84■□□□□ 0.93
NIPAL3-206ENST00000475663 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.93
NIPAL3-206ENST00000475663 ZFYVE16Q7Z3T8 1539 aa20.83■□□□□ 0.93
NIPAL3-206ENST00000475663 ARHGEF40Q8TER5 1519 aa20.83■□□□□ 0.93
NIPAL3-206ENST00000475663 KANK4Q5T7N3 995 aaPredicted RBP20.83■□□□□ 0.93
NIPAL3-206ENST00000475663 TIAM1Q13009 1591 aa20.83■□□□□ 0.92
NIPAL3-206ENST00000475663 HNRNPMP52272 730 aaKnown RBP eCLIP20.82■□□□□ 0.92
NIPAL3-206ENST00000475663 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
NIPAL3-206ENST00000475663 ABCC1P33527 1531 aa20.8■□□□□ 0.92
NIPAL3-206ENST00000475663 ZNF518AQ6AHZ1 1483 aa20.8■□□□□ 0.92
NIPAL3-206ENST00000475663 MLECQ14165 292 aa20.79■□□□□ 0.92
NIPAL3-206ENST00000475663 SAMD9LQ8IVG5 1584 aa20.79■□□□□ 0.92
NIPAL3-206ENST00000475663 NCOA2Q15596 1464 aa20.78■□□□□ 0.92
NIPAL3-206ENST00000475663 MAGI2Q86UL8 1455 aa20.77■□□□□ 0.92
NIPAL3-206ENST00000475663 LRRC9Q6ZRR7 1453 aa20.76■□□□□ 0.91
NIPAL3-206ENST00000475663 SYCP2Q9BX26 1530 aa20.76■□□□□ 0.91
NIPAL3-206ENST00000475663 SIGLEC1Q9BZZ2 1709 aa20.75■□□□□ 0.91
NIPAL3-206ENST00000475663 KDM5CP41229 1560 aa20.75■□□□□ 0.91
NIPAL3-206ENST00000475663 ITSN2Q9NZM3 1697 aa20.74■□□□□ 0.91
NIPAL3-206ENST00000475663 ATP10AO60312 1499 aa20.73■□□□□ 0.91
NIPAL3-206ENST00000475663 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
NIPAL3-206ENST00000475663 SUPT6HQ7KZ85 1726 aaKnown RBP20.71■□□□□ 0.91
NIPAL3-206ENST00000475663 APLP2Q06481 763 aa20.71■□□□□ 0.91
NIPAL3-206ENST00000475663 HECW2Q9P2P5 1572 aa20.71■□□□□ 0.91
NIPAL3-206ENST00000475663 C9orf84Q5VXU9 1444 aa20.7■□□□□ 0.9
NIPAL3-206ENST00000475663 BCORL1Q5H9F3 1711 aa20.7■□□□□ 0.9
NIPAL3-206ENST00000475663 ADAMTSL3P82987 1691 aa20.69■□□□□ 0.9
NIPAL3-206ENST00000475663 SPAG9O60271 1321 aaKnown RBP20.69■□□□□ 0.9
NIPAL3-206ENST00000475663 MLH3Q9UHC1 1453 aa20.69■□□□□ 0.9
NIPAL3-206ENST00000475663 DIP2CQ9Y2E4 1556 aa20.68■□□□□ 0.9
NIPAL3-206ENST00000475663 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
NIPAL3-206ENST00000475663 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
NIPAL3-206ENST00000475663 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
NIPAL3-206ENST00000475663 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
NIPAL3-206ENST00000475663 PLEKHH2Q8IVE3 1493 aa20.66■□□□□ 0.9
NIPAL3-206ENST00000475663 PTPRMP28827 1452 aa20.65■□□□□ 0.9
NIPAL3-206ENST00000475663 CAMSAP2Q08AD1 1489 aa20.63■□□□□ 0.89
NIPAL3-206ENST00000475663 MBD5Q9P267 1494 aa20.63■□□□□ 0.89
NIPAL3-206ENST00000475663 KIDINS220Q9ULH0 1771 aa20.63■□□□□ 0.89
NIPAL3-206ENST00000475663 RIMS1Q86UR5 1692 aaKnown RBP20.6■□□□□ 0.89
NIPAL3-206ENST00000475663 ATP7AQ04656 1500 aa20.59■□□□□ 0.89
NIPAL3-206ENST00000475663 MYOM3Q5VTT5 1437 aa20.58■□□□□ 0.88
NIPAL3-206ENST00000475663 CEBPAP49715 358 aaPredicted RBP20.56■□□□□ 0.88
NIPAL3-206ENST00000475663 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
NIPAL3-206ENST00000475663 INO80Q9ULG1 1556 aaPredicted RBP20.55■□□□□ 0.88
NIPAL3-206ENST00000475663 CCDC141Q6ZP82 1450 aa20.55■□□□□ 0.88
NIPAL3-206ENST00000475663 REREQ9P2R6 1566 aa20.53■□□□□ 0.88
NIPAL3-206ENST00000475663 A2MP01023 1474 aa20.52■□□□□ 0.88
NIPAL3-206ENST00000475663 AGLP35573 1532 aa20.51■□□□□ 0.87
NIPAL3-206ENST00000475663 FER1L4A9Z1Z3 1794 aa20.5■□□□□ 0.87
NIPAL3-206ENST00000475663 MIA2Q96PC5 1412 aa20.5■□□□□ 0.87
NIPAL3-206ENST00000475663 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
NIPAL3-206ENST00000475663 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
NIPAL3-206ENST00000475663 RSPH4AQ5TD94 716 aa20.48■□□□□ 0.87
NIPAL3-206ENST00000475663 GGT6Q6P531 493 aa20.48■□□□□ 0.87
NIPAL3-206ENST00000475663 RTEL1-TNFRSF6BF6WH68 1400 aa20.47■□□□□ 0.87
NIPAL3-206ENST00000475663 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
NIPAL3-206ENST00000475663 ARHGEF5Q12774 1597 aa20.46■□□□□ 0.87
NIPAL3-206ENST00000475663 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
NIPAL3-206ENST00000475663 PLXNC1O60486 1568 aa20.45■□□□□ 0.86
NIPAL3-206ENST00000475663 DHX29Q7Z478 1369 aaKnown RBP20.44■□□□□ 0.86
NIPAL3-206ENST00000475663 PTPN23Q9H3S7 1636 aa20.43■□□□□ 0.86
NIPAL3-206ENST00000475663 KIF3BO15066 747 aa20.43■□□□□ 0.86
NIPAL3-206ENST00000475663 HSPA2P54652 639 aa20.43■□□□□ 0.86
NIPAL3-206ENST00000475663 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
NIPAL3-206ENST00000475663 ABCC5O15440 1437 aa20.41■□□□□ 0.86
NIPAL3-206ENST00000475663 ADGBQ8N7X0 1667 aa20.4■□□□□ 0.86
NIPAL3-206ENST00000475663 LMTK3Q96Q04 1460 aa20.4■□□□□ 0.86
NIPAL3-206ENST00000475663 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
NIPAL3-206ENST00000475663 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
NIPAL3-206ENST00000475663 DAPK1P53355 1430 aa20.36■□□□□ 0.85
NIPAL3-206ENST00000475663 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
NIPAL3-206ENST00000475663 ZMYM3Q14202 1370 aa20.35■□□□□ 0.85
NIPAL3-206ENST00000475663 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
NIPAL3-206ENST00000475663 MAST1Q9Y2H9 1570 aa20.34■□□□□ 0.85
NIPAL3-206ENST00000475663 C3P01024 1663 aa20.34■□□□□ 0.85
NIPAL3-206ENST00000475663 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
NIPAL3-206ENST00000475663 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
NIPAL3-206ENST00000475663 DNMT1P26358 1616 aaKnown RBP20.31■□□□□ 0.84
NIPAL3-206ENST00000475663 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
NIPAL3-206ENST00000475663 WASHC2CQ9Y4E1 1318 aa20.27■□□□□ 0.84
NIPAL3-206ENST00000475663 UHRF1BP1Q6BDS2 1440 aa20.27■□□□□ 0.84
NIPAL3-206ENST00000475663 CROCC2H7BZ55 1655 aa20.27■□□□□ 0.84
NIPAL3-206ENST00000475663 ITGAEP38570 1179 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms