RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 PHLDB1Q86UU1 1377 aa23.4■■□□□ 1.34
MCF2L-224ENST00000475524 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
MCF2L-224ENST00000475524 NEO1Q92859 1461 aa23.37■■□□□ 1.33
MCF2L-224ENST00000475524 FGD6Q6ZV73 1430 aa23.36■■□□□ 1.33
MCF2L-224ENST00000475524 FANCAO15360 1455 aa23.35■■□□□ 1.33
MCF2L-224ENST00000475524 TSPOAP1O95153 1857 aa23.34■■□□□ 1.33
MCF2L-224ENST00000475524 PLEKHH2Q8IVE3 1493 aa23.34■■□□□ 1.33
MCF2L-224ENST00000475524 TCOF1Q13428 1488 aaKnown RBP23.33■■□□□ 1.33
MCF2L-224ENST00000475524 EFCAB2Q5VUJ9 269 aa23.33■■□□□ 1.33
MCF2L-224ENST00000475524 PPARGC1BQ86YN6 1023 aaKnown RBP23.33■■□□□ 1.33
MCF2L-224ENST00000475524 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.32
MCF2L-224ENST00000475524 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
MCF2L-224ENST00000475524 CFDP1Q9UEE9 299 aaPredicted RBP23.32■■□□□ 1.32
MCF2L-224ENST00000475524 RRBP1Q9P2E9 1410 aaKnown RBP23.32■■□□□ 1.32
MCF2L-224ENST00000475524 SAMD9LQ8IVG5 1584 aa23.31■■□□□ 1.32
MCF2L-224ENST00000475524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.3■■□□□ 1.32
MCF2L-224ENST00000475524 ABCC1P33527 1531 aa23.29■■□□□ 1.32
MCF2L-224ENST00000475524 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
MCF2L-224ENST00000475524 CAMSAP2Q08AD1 1489 aa23.28■■□□□ 1.32
MCF2L-224ENST00000475524 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
MCF2L-224ENST00000475524 ARHGEF5Q12774 1597 aa23.24■■□□□ 1.31
MCF2L-224ENST00000475524 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
MCF2L-224ENST00000475524 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
MCF2L-224ENST00000475524 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
MCF2L-224ENST00000475524 RSPH4AQ5TD94 716 aa23.19■■□□□ 1.3
MCF2L-224ENST00000475524 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
MCF2L-224ENST00000475524 SCAPERQ9BY12 1400 aa23.16■■□□□ 1.3
MCF2L-224ENST00000475524 RICTORQ6R327 1708 aa23.16■■□□□ 1.3
MCF2L-224ENST00000475524 CROCC2H7BZ55 1655 aa23.16■■□□□ 1.3
MCF2L-224ENST00000475524 ZNF777Q9ULD5 760 aaPredicted RBP23.16■■□□□ 1.3
MCF2L-224ENST00000475524 ARHGEF12Q9NZN5 1544 aa23.16■■□□□ 1.3
MCF2L-224ENST00000475524 DENND4BO75064 1496 aaPredicted RBP23.16■■□□□ 1.3
MCF2L-224ENST00000475524 ZNF518AQ6AHZ1 1483 aa23.16■■□□□ 1.3
MCF2L-224ENST00000475524 CCDC141Q6ZP82 1450 aa23.15■■□□□ 1.3
MCF2L-224ENST00000475524 POGZQ7Z3K3 1410 aa23.15■■□□□ 1.3
MCF2L-224ENST00000475524 KDM5CP41229 1560 aa23.14■■□□□ 1.3
MCF2L-224ENST00000475524 ZNF644Q9H582 1327 aaPredicted RBP23.14■■□□□ 1.3
MCF2L-224ENST00000475524 SHANK2Q9UPX8 1470 aa23.13■■□□□ 1.29
MCF2L-224ENST00000475524 MAST1Q9Y2H9 1570 aa23.12■■□□□ 1.29
MCF2L-224ENST00000475524 ZMYM4Q5VZL5 1548 aa23.12■■□□□ 1.29
MCF2L-224ENST00000475524 KDM6BO15054 1643 aa23.11■■□□□ 1.29
MCF2L-224ENST00000475524 FRMPD1Q5SYB0 1578 aa23.1■■□□□ 1.29
MCF2L-224ENST00000475524 DAPK1P53355 1430 aa23.1■■□□□ 1.29
MCF2L-224ENST00000475524 FAM50AQ14320 339 aaKnown RBP23.1■■□□□ 1.29
MCF2L-224ENST00000475524 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.29
MCF2L-224ENST00000475524 ABCC5O15440 1437 aa23.08■■□□□ 1.28
MCF2L-224ENST00000475524 INO80Q9ULG1 1556 aaPredicted RBP23.06■■□□□ 1.28
MCF2L-224ENST00000475524 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
MCF2L-224ENST00000475524 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
MCF2L-224ENST00000475524 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
MCF2L-224ENST00000475524 HECW2Q9P2P5 1572 aa23.06■■□□□ 1.28
MCF2L-224ENST00000475524 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
MCF2L-224ENST00000475524 MLH3Q9UHC1 1453 aa23.05■■□□□ 1.28
MCF2L-224ENST00000475524 COL17A1Q9UMD9 1497 aaPredicted RBP23.05■■□□□ 1.28
MCF2L-224ENST00000475524 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
MCF2L-224ENST00000475524 ZFYVE16Q7Z3T8 1539 aa23.03■■□□□ 1.28
MCF2L-224ENST00000475524 PLXNC1O60486 1568 aa23.02■■□□□ 1.28
MCF2L-224ENST00000475524 TRIM26Q12899 539 aaPredicted RBP23.02■■□□□ 1.28
MCF2L-224ENST00000475524 C9orf84Q5VXU9 1444 aa23.01■■□□□ 1.27
MCF2L-224ENST00000475524 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
MCF2L-224ENST00000475524 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
MCF2L-224ENST00000475524 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
MCF2L-224ENST00000475524 KIDINS220Q9ULH0 1771 aa23.01■■□□□ 1.27
MCF2L-224ENST00000475524 AFAP1Q8N556 730 aa22.99■■□□□ 1.27
MCF2L-224ENST00000475524 ROCK1Q13464 1354 aa22.99■■□□□ 1.27
MCF2L-224ENST00000475524 SPAG9O60271 1321 aaKnown RBP22.98■■□□□ 1.27
MCF2L-224ENST00000475524 RAPGEF3O95398 923 aa22.97■■□□□ 1.27
MCF2L-224ENST00000475524 PTPRKQ15262 1439 aa22.96■■□□□ 1.27
MCF2L-224ENST00000475524 ARHGEF40Q8TER5 1519 aa22.95■■□□□ 1.26
MCF2L-224ENST00000475524 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
MCF2L-224ENST00000475524 REREQ9P2R6 1566 aa22.93■■□□□ 1.26
MCF2L-224ENST00000475524 NCOA1Q15788 1441 aa22.92■■□□□ 1.26
MCF2L-224ENST00000475524 ABCA6Q8N139 1617 aa22.92■■□□□ 1.26
MCF2L-224ENST00000475524 DIP2CQ9Y2E4 1556 aa22.92■■□□□ 1.26
MCF2L-224ENST00000475524 GCC2Q8IWJ2 1684 aa22.91■■□□□ 1.26
MCF2L-224ENST00000475524 DUOX2Q9NRD8 1548 aa22.88■■□□□ 1.25
MCF2L-224ENST00000475524 HFM1A2PYH4 1435 aa22.87■■□□□ 1.25
MCF2L-224ENST00000475524 ITGAEP38570 1179 aa22.86■■□□□ 1.25
MCF2L-224ENST00000475524 KIF15Q9NS87 1388 aa22.86■■□□□ 1.25
MCF2L-224ENST00000475524 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
MCF2L-224ENST00000475524 ATP10AO60312 1499 aa22.85■■□□□ 1.25
MCF2L-224ENST00000475524 BCORL1Q5H9F3 1711 aa22.85■■□□□ 1.25
MCF2L-224ENST00000475524 YEATS2Q9ULM3 1422 aa22.85■■□□□ 1.25
MCF2L-224ENST00000475524 ERBINQ96RT1 1412 aa22.83■■□□□ 1.25
MCF2L-224ENST00000475524 CHIC2Q9UKJ5 165 aa22.83■■□□□ 1.25
MCF2L-224ENST00000475524 A2MP01023 1474 aa22.83■■□□□ 1.25
MCF2L-224ENST00000475524 AGLP35573 1532 aa22.82■■□□□ 1.24
MCF2L-224ENST00000475524 NAIPQ13075 1403 aa22.82■■□□□ 1.24
MCF2L-224ENST00000475524 DHX29Q7Z478 1369 aaKnown RBP22.81■■□□□ 1.24
MCF2L-224ENST00000475524 MYT1LQ9UL68 1186 aa22.81■■□□□ 1.24
MCF2L-224ENST00000475524 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
MCF2L-224ENST00000475524 ANKRD50Q9ULJ7 1429 aa22.78■■□□□ 1.24
MCF2L-224ENST00000475524 RRP7BPQ9NSQ0 103 aa22.76■■□□□ 1.23
MCF2L-224ENST00000475524 SETD5Q9C0A6 1442 aa22.75■■□□□ 1.23
MCF2L-224ENST00000475524 RNF17Q9BXT8 1623 aaKnown RBP22.74■■□□□ 1.23
MCF2L-224ENST00000475524 DEPDC5O75140 1603 aa22.73■■□□□ 1.23
MCF2L-224ENST00000475524 HRCP23327 699 aa22.71■■□□□ 1.23
MCF2L-224ENST00000475524 UNC13BO14795 1591 aa22.71■■□□□ 1.23
MCF2L-224ENST00000475524 FAM135AQ9P2D6 1515 aa22.7■■□□□ 1.22
MCF2L-224ENST00000475524 SIGLEC1Q9BZZ2 1709 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms