RNA–Protein interactions for RNA: ENST00000475422.5

ITSN1-227, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-227ENST00000475422 KIF14Q15058 1648 aa25.81■■□□□ 1.72
ITSN1-227ENST00000475422 POGZQ7Z3K3 1410 aa25.81■■□□□ 1.72
ITSN1-227ENST00000475422 YEATS2Q9ULM3 1422 aa25.81■■□□□ 1.72
ITSN1-227ENST00000475422 CLIP1P30622 1438 aa25.8■■□□□ 1.72
ITSN1-227ENST00000475422 TROQ12816 1431 aaPredicted RBP25.8■■□□□ 1.72
ITSN1-227ENST00000475422 RIMS1Q86UR5 1692 aaKnown RBP25.79■■□□□ 1.72
ITSN1-227ENST00000475422 LRRIQ1Q96JM4 1722 aa25.76■■□□□ 1.71
ITSN1-227ENST00000475422 ARHGAP5Q13017 1502 aa25.74■■□□□ 1.71
ITSN1-227ENST00000475422 MLECQ14165 292 aa25.74■■□□□ 1.71
ITSN1-227ENST00000475422 PLPPR3Q6T4P5 718 aa25.74■■□□□ 1.71
ITSN1-227ENST00000475422 SIGLEC1Q9BZZ2 1709 aa25.71■■□□□ 1.71
ITSN1-227ENST00000475422 PCF11O94913 1555 aaKnown RBP25.7■■□□□ 1.71
ITSN1-227ENST00000475422 CASKIN1Q8WXD9 1431 aa25.7■■□□□ 1.7
ITSN1-227ENST00000475422 CCDC18Q5T9S5 1454 aa25.69■■□□□ 1.7
ITSN1-227ENST00000475422 MYT1LQ9UL68 1186 aa25.69■■□□□ 1.7
ITSN1-227ENST00000475422 ATP10AO60312 1499 aa25.68■■□□□ 1.7
ITSN1-227ENST00000475422 ZNF518AQ6AHZ1 1483 aa25.67■■□□□ 1.7
ITSN1-227ENST00000475422 LMTK3Q96Q04 1460 aa25.66■■□□□ 1.7
ITSN1-227ENST00000475422 C9orf84Q5VXU9 1444 aa25.65■■□□□ 1.7
ITSN1-227ENST00000475422 FER1L4A9Z1Z3 1794 aa25.65■■□□□ 1.7
ITSN1-227ENST00000475422 AFAP1Q8N556 730 aa25.65■■□□□ 1.7
ITSN1-227ENST00000475422 CDC42BPBQ9Y5S2 1711 aa25.63■■□□□ 1.69
ITSN1-227ENST00000475422 FYCO1Q9BQS8 1478 aa25.6■■□□□ 1.69
ITSN1-227ENST00000475422 KDM5CP41229 1560 aa25.6■■□□□ 1.69
ITSN1-227ENST00000475422 PREX2Q70Z35 1606 aa25.59■■□□□ 1.69
ITSN1-227ENST00000475422 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
ITSN1-227ENST00000475422 HSPA2P54652 639 aa25.56■■□□□ 1.68
ITSN1-227ENST00000475422 ABCC1P33527 1531 aa25.53■■□□□ 1.68
ITSN1-227ENST00000475422 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
ITSN1-227ENST00000475422 CDC42BPAQ5VT25 1732 aa25.52■■□□□ 1.68
ITSN1-227ENST00000475422 MLH3Q9UHC1 1453 aa25.52■■□□□ 1.68
ITSN1-227ENST00000475422 TRAPPC8Q9Y2L5 1435 aa25.51■■□□□ 1.67
ITSN1-227ENST00000475422 ITSN2Q9NZM3 1697 aa25.51■■□□□ 1.67
ITSN1-227ENST00000475422 ZNF777Q9ULD5 760 aaPredicted RBP25.5■■□□□ 1.67
ITSN1-227ENST00000475422 FBXO41Q8TF61 875 aa25.49■■□□□ 1.67
ITSN1-227ENST00000475422 ABCA6Q8N139 1617 aa25.48■■□□□ 1.67
ITSN1-227ENST00000475422 CEBPAP49715 358 aaPredicted RBP25.48■■□□□ 1.67
ITSN1-227ENST00000475422 REREQ9P2R6 1566 aa25.47■■□□□ 1.67
ITSN1-227ENST00000475422 ESF1Q9H501 851 aaKnown RBP25.45■■□□□ 1.66
ITSN1-227ENST00000475422 PREX1Q8TCU6 1659 aa25.43■■□□□ 1.66
ITSN1-227ENST00000475422 GPATCH8Q9UKJ3 1502 aaKnown RBP25.42■■□□□ 1.66
ITSN1-227ENST00000475422 KIDINS220Q9ULH0 1771 aa25.41■■□□□ 1.66
ITSN1-227ENST00000475422 SAMD9LQ8IVG5 1584 aa25.4■■□□□ 1.66
ITSN1-227ENST00000475422 MTUS2Q5JR59 1369 aa25.4■■□□□ 1.66
ITSN1-227ENST00000475422 AGLP35573 1532 aa25.39■■□□□ 1.66
ITSN1-227ENST00000475422 CFDP1Q9UEE9 299 aaPredicted RBP25.39■■□□□ 1.66
ITSN1-227ENST00000475422 CCNB3Q8WWL7 1395 aa25.39■■□□□ 1.65
ITSN1-227ENST00000475422 SYCP2Q9BX26 1530 aa25.38■■□□□ 1.65
ITSN1-227ENST00000475422 HNRNPMP52272 730 aaKnown RBP eCLIP25.38■■□□□ 1.65
ITSN1-227ENST00000475422 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
ITSN1-227ENST00000475422 UHRF1BP1Q6BDS2 1440 aa25.36■■□□□ 1.65
ITSN1-227ENST00000475422 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
ITSN1-227ENST00000475422 C3P01024 1663 aa25.33■■□□□ 1.65
ITSN1-227ENST00000475422 SETD1BQ9UPS6 1966 aaKnown RBP25.32■■□□□ 1.64
ITSN1-227ENST00000475422 KIAA1107Q9UPP5 1409 aa25.31■■□□□ 1.64
ITSN1-227ENST00000475422 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
ITSN1-227ENST00000475422 CNTLNQ9NXG0 1405 aa25.29■■□□□ 1.64
ITSN1-227ENST00000475422 ATP7AQ04656 1500 aa25.28■■□□□ 1.64
ITSN1-227ENST00000475422 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
ITSN1-227ENST00000475422 SUPT6HQ7KZ85 1726 aaKnown RBP25.27■■□□□ 1.64
ITSN1-227ENST00000475422 DMRT2Q9Y5R5 561 aa25.27■■□□□ 1.64
ITSN1-227ENST00000475422 CERKQ8TCT0 537 aa25.25■■□□□ 1.63
ITSN1-227ENST00000475422 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
ITSN1-227ENST00000475422 INO80Q9ULG1 1556 aaPredicted RBP25.24■■□□□ 1.63
ITSN1-227ENST00000475422 ZNF644Q9H582 1327 aaPredicted RBP25.22■■□□□ 1.63
ITSN1-227ENST00000475422 STRCQ7RTU9 1775 aa25.22■■□□□ 1.63
ITSN1-227ENST00000475422 A2MP01023 1474 aa25.21■■□□□ 1.63
ITSN1-227ENST00000475422 MROH2AA6NES4 1674 aa25.19■■□□□ 1.62
ITSN1-227ENST00000475422 PLXNC1O60486 1568 aa25.18■■□□□ 1.62
ITSN1-227ENST00000475422 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
ITSN1-227ENST00000475422 GGT6Q6P531 493 aa25.17■■□□□ 1.62
ITSN1-227ENST00000475422 CLTCQ00610 1675 aaKnown RBP25.15■■□□□ 1.62
ITSN1-227ENST00000475422 ADGBQ8N7X0 1667 aa25.15■■□□□ 1.62
ITSN1-227ENST00000475422 NPATQ14207 1427 aa25.14■■□□□ 1.62
ITSN1-227ENST00000475422 MBD5Q9P267 1494 aa25.14■■□□□ 1.61
ITSN1-227ENST00000475422 NCOA2Q15596 1464 aa25.11■■□□□ 1.61
ITSN1-227ENST00000475422 PTPRTO14522 1441 aa25.11■■□□□ 1.61
ITSN1-227ENST00000475422 RTEL1-TNFRSF6BF6WH68 1400 aa25.09■■□□□ 1.61
ITSN1-227ENST00000475422 NCOA1Q15788 1441 aa25.07■■□□□ 1.6
ITSN1-227ENST00000475422 LOC105371045A0A1W2PR82 267 aa25.07■■□□□ 1.6
ITSN1-227ENST00000475422 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
ITSN1-227ENST00000475422 CAMSAP2Q08AD1 1489 aa25.07■■□□□ 1.6
ITSN1-227ENST00000475422 CCDC141Q6ZP82 1450 aa25.06■■□□□ 1.6
ITSN1-227ENST00000475422 CAMSAP1Q5T5Y3 1602 aa25.05■■□□□ 1.6
ITSN1-227ENST00000475422 DHX29Q7Z478 1369 aaKnown RBP25.05■■□□□ 1.6
ITSN1-227ENST00000475422 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
ITSN1-227ENST00000475422 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
ITSN1-227ENST00000475422 VPS8Q8N3P4 1428 aa25.03■■□□□ 1.6
ITSN1-227ENST00000475422 MYO3AQ8NEV4 1616 aa25.02■■□□□ 1.6
ITSN1-227ENST00000475422 KIF3BO15066 747 aa25.01■■□□□ 1.59
ITSN1-227ENST00000475422 LRRC9Q6ZRR7 1453 aa24.98■■□□□ 1.59
ITSN1-227ENST00000475422 NCKAP5LQ9HCH0 1330 aa24.98■■□□□ 1.59
ITSN1-227ENST00000475422 TSPY4P0CV99 314 aa24.98■■□□□ 1.59
ITSN1-227ENST00000475422 TSPY10P0CW01 314 aa24.98■■□□□ 1.59
ITSN1-227ENST00000475422 ZNF142P52746 1687 aaPredicted RBP24.97■■□□□ 1.59
ITSN1-227ENST00000475422 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
ITSN1-227ENST00000475422 ARHGEF5Q12774 1597 aa24.95■■□□□ 1.58
ITSN1-227ENST00000475422 PKD2Q13563 968 aa24.93■■□□□ 1.58
ITSN1-227ENST00000475422 LTBP4Q8N2S1 1624 aa24.93■■□□□ 1.58
ITSN1-227ENST00000475422 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms