RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
GPM6B-208ENST00000475307 POGZQ7Z3K3 1410 aa18.38■□□□□ 0.53
GPM6B-208ENST00000475307 ZMYM4Q5VZL5 1548 aa18.37■□□□□ 0.53
GPM6B-208ENST00000475307 ARHGEF40Q8TER5 1519 aa18.37■□□□□ 0.53
GPM6B-208ENST00000475307 ZFYVE16Q7Z3T8 1539 aa18.36■□□□□ 0.53
GPM6B-208ENST00000475307 MAGI2Q86UL8 1455 aa18.36■□□□□ 0.53
GPM6B-208ENST00000475307 YEATS2Q9ULM3 1422 aa18.35■□□□□ 0.53
GPM6B-208ENST00000475307 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
GPM6B-208ENST00000475307 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
GPM6B-208ENST00000475307 MTUS2Q5JR59 1369 aa18.31■□□□□ 0.52
GPM6B-208ENST00000475307 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
GPM6B-208ENST00000475307 ZNF518AQ6AHZ1 1483 aa18.31■□□□□ 0.52
GPM6B-208ENST00000475307 CDC42BPBQ9Y5S2 1711 aa18.3■□□□□ 0.52
GPM6B-208ENST00000475307 ADAMTSL3P82987 1691 aa18.3■□□□□ 0.52
GPM6B-208ENST00000475307 ZNF777Q9ULD5 760 aaPredicted RBP18.29■□□□□ 0.52
GPM6B-208ENST00000475307 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
GPM6B-208ENST00000475307 ATP10AO60312 1499 aa18.27■□□□□ 0.52
GPM6B-208ENST00000475307 PTPRMP28827 1452 aa18.26■□□□□ 0.51
GPM6B-208ENST00000475307 MLECQ14165 292 aa18.26■□□□□ 0.51
GPM6B-208ENST00000475307 ABCC1P33527 1531 aa18.26■□□□□ 0.51
GPM6B-208ENST00000475307 GPATCH8Q9UKJ3 1502 aaKnown RBP18.26■□□□□ 0.51
GPM6B-208ENST00000475307 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
GPM6B-208ENST00000475307 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
GPM6B-208ENST00000475307 ARHGEF12Q9NZN5 1544 aa18.25■□□□□ 0.51
GPM6B-208ENST00000475307 CFDP1Q9UEE9 299 aaPredicted RBP18.25■□□□□ 0.51
GPM6B-208ENST00000475307 KDM5CP41229 1560 aa18.25■□□□□ 0.51
GPM6B-208ENST00000475307 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
GPM6B-208ENST00000475307 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
GPM6B-208ENST00000475307 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
GPM6B-208ENST00000475307 EHBP1L1Q8N3D4 1523 aa18.23■□□□□ 0.51
GPM6B-208ENST00000475307 HECW2Q9P2P5 1572 aa18.22■□□□□ 0.51
GPM6B-208ENST00000475307 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
GPM6B-208ENST00000475307 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
GPM6B-208ENST00000475307 ITSN2Q9NZM3 1697 aa18.21■□□□□ 0.51
GPM6B-208ENST00000475307 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
GPM6B-208ENST00000475307 HNRNPMP52272 730 aaKnown RBP eCLIP18.2■□□□□ 0.5
GPM6B-208ENST00000475307 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
GPM6B-208ENST00000475307 SAMD9LQ8IVG5 1584 aa18.2■□□□□ 0.5
GPM6B-208ENST00000475307 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
GPM6B-208ENST00000475307 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
GPM6B-208ENST00000475307 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
GPM6B-208ENST00000475307 PLEKHH2Q8IVE3 1493 aa18.17■□□□□ 0.5
GPM6B-208ENST00000475307 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
GPM6B-208ENST00000475307 SPAG9O60271 1321 aaKnown RBP18.16■□□□□ 0.5
GPM6B-208ENST00000475307 TIAM1Q13009 1591 aa18.15■□□□□ 0.5
GPM6B-208ENST00000475307 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
GPM6B-208ENST00000475307 ZNF644Q9H582 1327 aaPredicted RBP18.13■□□□□ 0.49
GPM6B-208ENST00000475307 NCOA2Q15596 1464 aa18.13■□□□□ 0.49
GPM6B-208ENST00000475307 REREQ9P2R6 1566 aa18.13■□□□□ 0.49
GPM6B-208ENST00000475307 SUPT6HQ7KZ85 1726 aaKnown RBP18.11■□□□□ 0.49
GPM6B-208ENST00000475307 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
GPM6B-208ENST00000475307 FER1L4A9Z1Z3 1794 aa18.1■□□□□ 0.49
GPM6B-208ENST00000475307 LRRC9Q6ZRR7 1453 aa18.09■□□□□ 0.49
GPM6B-208ENST00000475307 ESF1Q9H501 851 aaKnown RBP18.09■□□□□ 0.49
GPM6B-208ENST00000475307 AGLP35573 1532 aa18.08■□□□□ 0.49
GPM6B-208ENST00000475307 ATP7AQ04656 1500 aa18.07■□□□□ 0.48
GPM6B-208ENST00000475307 CEBPAP49715 358 aaPredicted RBP18.06■□□□□ 0.48
GPM6B-208ENST00000475307 APLP2Q06481 763 aa18.06■□□□□ 0.48
GPM6B-208ENST00000475307 KANK4Q5T7N3 995 aaPredicted RBP18.06■□□□□ 0.48
GPM6B-208ENST00000475307 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
GPM6B-208ENST00000475307 MBD5Q9P267 1494 aa18.06■□□□□ 0.48
GPM6B-208ENST00000475307 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
GPM6B-208ENST00000475307 INO80Q9ULG1 1556 aaPredicted RBP18.04■□□□□ 0.48
GPM6B-208ENST00000475307 A2MP01023 1474 aa18.02■□□□□ 0.48
GPM6B-208ENST00000475307 CAMSAP2Q08AD1 1489 aa18.02■□□□□ 0.48
GPM6B-208ENST00000475307 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.48
GPM6B-208ENST00000475307 HSPA2P54652 639 aa18.01■□□□□ 0.47
GPM6B-208ENST00000475307 CCDC141Q6ZP82 1450 aa18■□□□□ 0.47
GPM6B-208ENST00000475307 RTEL1-TNFRSF6BF6WH68 1400 aa17.99■□□□□ 0.47
GPM6B-208ENST00000475307 CNTLNQ9NXG0 1405 aa17.98■□□□□ 0.47
GPM6B-208ENST00000475307 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
GPM6B-208ENST00000475307 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
GPM6B-208ENST00000475307 GGT6Q6P531 493 aa17.97■□□□□ 0.47
GPM6B-208ENST00000475307 PLXNC1O60486 1568 aa17.96■□□□□ 0.47
GPM6B-208ENST00000475307 ADGBQ8N7X0 1667 aa17.95■□□□□ 0.46
GPM6B-208ENST00000475307 MYOM3Q5VTT5 1437 aa17.95■□□□□ 0.46
GPM6B-208ENST00000475307 DHX29Q7Z478 1369 aaKnown RBP17.94■□□□□ 0.46
GPM6B-208ENST00000475307 MIA2Q96PC5 1412 aa17.94■□□□□ 0.46
GPM6B-208ENST00000475307 ARHGEF5Q12774 1597 aa17.93■□□□□ 0.46
GPM6B-208ENST00000475307 UHRF1BP1Q6BDS2 1440 aa17.93■□□□□ 0.46
GPM6B-208ENST00000475307 C3P01024 1663 aa17.93■□□□□ 0.46
GPM6B-208ENST00000475307 PREX1Q8TCU6 1659 aa17.92■□□□□ 0.46
GPM6B-208ENST00000475307 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
GPM6B-208ENST00000475307 KIF3BO15066 747 aa17.9■□□□□ 0.46
GPM6B-208ENST00000475307 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
GPM6B-208ENST00000475307 MROH2AA6NES4 1674 aa17.87■□□□□ 0.45
GPM6B-208ENST00000475307 CLTCQ00610 1675 aaKnown RBP17.87■□□□□ 0.45
GPM6B-208ENST00000475307 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
GPM6B-208ENST00000475307 NPATQ14207 1427 aa17.85■□□□□ 0.45
GPM6B-208ENST00000475307 MAST1Q9Y2H9 1570 aa17.84■□□□□ 0.45
GPM6B-208ENST00000475307 PTPN23Q9H3S7 1636 aa17.82■□□□□ 0.44
GPM6B-208ENST00000475307 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
GPM6B-208ENST00000475307 WASHC2CQ9Y4E1 1318 aa17.81■□□□□ 0.44
GPM6B-208ENST00000475307 SETD1BQ9UPS6 1966 aaKnown RBP17.81■□□□□ 0.44
GPM6B-208ENST00000475307 PTPRKQ15262 1439 aa17.81■□□□□ 0.44
GPM6B-208ENST00000475307 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
GPM6B-208ENST00000475307 ABCC5O15440 1437 aa17.8■□□□□ 0.44
GPM6B-208ENST00000475307 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.44
GPM6B-208ENST00000475307 TCOF1Q13428 1488 aaKnown RBP17.77■□□□□ 0.44
GPM6B-208ENST00000475307 DAPK1P53355 1430 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms