RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 RICTORQ6R327 1708 aa19.87■□□□□ 0.77
SSR1-205ENST00000475213 PLCH2O75038 1416 aa19.86■□□□□ 0.77
SSR1-205ENST00000475213 MYO5CQ9NQX4 1742 aa19.86■□□□□ 0.77
SSR1-205ENST00000475213 DENND4BO75064 1496 aaPredicted RBP19.86■□□□□ 0.77
SSR1-205ENST00000475213 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
SSR1-205ENST00000475213 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
SSR1-205ENST00000475213 PPP4R3CPQ6ZMV5 832 aa19.84■□□□□ 0.77
SSR1-205ENST00000475213 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.76
SSR1-205ENST00000475213 EFCAB2Q5VUJ9 269 aa19.78■□□□□ 0.76
SSR1-205ENST00000475213 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.76
SSR1-205ENST00000475213 ZMYM4Q5VZL5 1548 aa19.77■□□□□ 0.76
SSR1-205ENST00000475213 ARHGEF40Q8TER5 1519 aa19.77■□□□□ 0.76
SSR1-205ENST00000475213 CDC42BPBQ9Y5S2 1711 aa19.76■□□□□ 0.75
SSR1-205ENST00000475213 ARHGAP5Q13017 1502 aa19.75■□□□□ 0.75
SSR1-205ENST00000475213 CEP162Q5TB80 1403 aa19.75■□□□□ 0.75
SSR1-205ENST00000475213 POGZQ7Z3K3 1410 aa19.75■□□□□ 0.75
SSR1-205ENST00000475213 ZFYVE16Q7Z3T8 1539 aa19.72■□□□□ 0.75
SSR1-205ENST00000475213 ADAMTSL3P82987 1691 aa19.72■□□□□ 0.75
SSR1-205ENST00000475213 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
SSR1-205ENST00000475213 PREX2Q70Z35 1606 aa19.72■□□□□ 0.75
SSR1-205ENST00000475213 MAGI2Q86UL8 1455 aa19.72■□□□□ 0.75
SSR1-205ENST00000475213 YEATS2Q9ULM3 1422 aa19.71■□□□□ 0.75
SSR1-205ENST00000475213 ARID4BQ4LE39 1312 aaPredicted RBP19.71■□□□□ 0.75
SSR1-205ENST00000475213 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
SSR1-205ENST00000475213 LOC105371045A0A1W2PR82 267 aa19.68■□□□□ 0.74
SSR1-205ENST00000475213 SIGLEC1Q9BZZ2 1709 aa19.68■□□□□ 0.74
SSR1-205ENST00000475213 ZNF518AQ6AHZ1 1483 aa19.66■□□□□ 0.74
SSR1-205ENST00000475213 MADDQ8WXG6 1647 aa19.65■□□□□ 0.74
SSR1-205ENST00000475213 AFAP1Q8N556 730 aa19.64■□□□□ 0.73
SSR1-205ENST00000475213 KDM5CP41229 1560 aa19.64■□□□□ 0.73
SSR1-205ENST00000475213 ABCC1P33527 1531 aa19.63■□□□□ 0.73
SSR1-205ENST00000475213 PTPRMP28827 1452 aa19.63■□□□□ 0.73
SSR1-205ENST00000475213 ITSN2Q9NZM3 1697 aa19.62■□□□□ 0.73
SSR1-205ENST00000475213 ARHGEF12Q9NZN5 1544 aa19.62■□□□□ 0.73
SSR1-205ENST00000475213 HECW2Q9P2P5 1572 aa19.61■□□□□ 0.73
SSR1-205ENST00000475213 ATP10AO60312 1499 aa19.61■□□□□ 0.73
SSR1-205ENST00000475213 MTUS2Q5JR59 1369 aa19.61■□□□□ 0.73
SSR1-205ENST00000475213 GPATCH8Q9UKJ3 1502 aaKnown RBP19.61■□□□□ 0.73
SSR1-205ENST00000475213 C9orf84Q5VXU9 1444 aa19.59■□□□□ 0.73
SSR1-205ENST00000475213 TRAPPC8Q9Y2L5 1435 aa19.59■□□□□ 0.73
SSR1-205ENST00000475213 RIMS1Q86UR5 1692 aaKnown RBP19.59■□□□□ 0.73
SSR1-205ENST00000475213 SAMD9LQ8IVG5 1584 aa19.58■□□□□ 0.73
SSR1-205ENST00000475213 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
SSR1-205ENST00000475213 MLH3Q9UHC1 1453 aa19.56■□□□□ 0.72
SSR1-205ENST00000475213 MYT1LQ9UL68 1186 aa19.56■□□□□ 0.72
SSR1-205ENST00000475213 ZNF777Q9ULD5 760 aaPredicted RBP19.56■□□□□ 0.72
SSR1-205ENST00000475213 CCNB3Q8WWL7 1395 aa19.56■□□□□ 0.72
SSR1-205ENST00000475213 MLECQ14165 292 aa19.55■□□□□ 0.72
SSR1-205ENST00000475213 DIP2CQ9Y2E4 1556 aa19.55■□□□□ 0.72
SSR1-205ENST00000475213 ABCA6Q8N139 1617 aa19.54■□□□□ 0.72
SSR1-205ENST00000475213 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
SSR1-205ENST00000475213 SYCP2Q9BX26 1530 aa19.53■□□□□ 0.72
SSR1-205ENST00000475213 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
SSR1-205ENST00000475213 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
SSR1-205ENST00000475213 KIDINS220Q9ULH0 1771 aa19.52■□□□□ 0.72
SSR1-205ENST00000475213 VPS8Q8N3P4 1428 aa19.52■□□□□ 0.72
SSR1-205ENST00000475213 REREQ9P2R6 1566 aa19.51■□□□□ 0.71
SSR1-205ENST00000475213 HNRNPMP52272 730 aaKnown RBP eCLIP19.5■□□□□ 0.71
SSR1-205ENST00000475213 KIAA1107Q9UPP5 1409 aa19.5■□□□□ 0.71
SSR1-205ENST00000475213 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
SSR1-205ENST00000475213 SUPT6HQ7KZ85 1726 aaKnown RBP19.48■□□□□ 0.71
SSR1-205ENST00000475213 NCOA2Q15596 1464 aa19.45■□□□□ 0.7
SSR1-205ENST00000475213 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
SSR1-205ENST00000475213 AGLP35573 1532 aa19.44■□□□□ 0.7
SSR1-205ENST00000475213 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
SSR1-205ENST00000475213 ATP7AQ04656 1500 aa19.42■□□□□ 0.7
SSR1-205ENST00000475213 INO80Q9ULG1 1556 aaPredicted RBP19.42■□□□□ 0.7
SSR1-205ENST00000475213 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
SSR1-205ENST00000475213 LMTK3Q96Q04 1460 aa19.41■□□□□ 0.7
SSR1-205ENST00000475213 MBD5Q9P267 1494 aa19.4■□□□□ 0.7
SSR1-205ENST00000475213 MAP3K1Q13233 1512 aa19.4■□□□□ 0.7
SSR1-205ENST00000475213 KANK4Q5T7N3 995 aaPredicted RBP19.37■□□□□ 0.69
SSR1-205ENST00000475213 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
SSR1-205ENST00000475213 CEBPAP49715 358 aaPredicted RBP19.36■□□□□ 0.69
SSR1-205ENST00000475213 CAMSAP2Q08AD1 1489 aa19.35■□□□□ 0.69
SSR1-205ENST00000475213 PLXNC1O60486 1568 aa19.35■□□□□ 0.69
SSR1-205ENST00000475213 A2MP01023 1474 aa19.34■□□□□ 0.69
SSR1-205ENST00000475213 SETD1BQ9UPS6 1966 aaKnown RBP19.33■□□□□ 0.69
SSR1-205ENST00000475213 C3P01024 1663 aa19.33■□□□□ 0.69
SSR1-205ENST00000475213 ADGBQ8N7X0 1667 aa19.33■□□□□ 0.69
SSR1-205ENST00000475213 ESF1Q9H501 851 aaKnown RBP19.32■□□□□ 0.68
SSR1-205ENST00000475213 PREX1Q8TCU6 1659 aa19.32■□□□□ 0.68
SSR1-205ENST00000475213 RTEL1-TNFRSF6BF6WH68 1400 aa19.32■□□□□ 0.68
SSR1-205ENST00000475213 CCDC141Q6ZP82 1450 aa19.31■□□□□ 0.68
SSR1-205ENST00000475213 HSPA2P54652 639 aa19.31■□□□□ 0.68
SSR1-205ENST00000475213 CNTLNQ9NXG0 1405 aa19.29■□□□□ 0.68
SSR1-205ENST00000475213 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
SSR1-205ENST00000475213 ARHGEF5Q12774 1597 aa19.28■□□□□ 0.68
SSR1-205ENST00000475213 APLP2Q06481 763 aa19.27■□□□□ 0.68
SSR1-205ENST00000475213 MROH2AA6NES4 1674 aa19.27■□□□□ 0.67
SSR1-205ENST00000475213 MYOM3Q5VTT5 1437 aa19.26■□□□□ 0.67
SSR1-205ENST00000475213 MIA2Q96PC5 1412 aa19.25■□□□□ 0.67
SSR1-205ENST00000475213 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
SSR1-205ENST00000475213 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
SSR1-205ENST00000475213 GGT6Q6P531 493 aa19.24■□□□□ 0.67
SSR1-205ENST00000475213 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
SSR1-205ENST00000475213 UHRF1BP1Q6BDS2 1440 aa19.23■□□□□ 0.67
SSR1-205ENST00000475213 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
SSR1-205ENST00000475213 TSPY4P0CV99 314 aa19.22■□□□□ 0.67
SSR1-205ENST00000475213 TSPY10P0CW01 314 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms