RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 ARHGAP5Q13017 1502 aa25.66■■□□□ 1.7
SRM-204ENST00000475189 FRMPD1Q5SYB0 1578 aa25.65■■□□□ 1.7
SRM-204ENST00000475189 MAP3K1Q13233 1512 aa25.64■■□□□ 1.7
SRM-204ENST00000475189 RICTORQ6R327 1708 aa25.63■■□□□ 1.69
SRM-204ENST00000475189 DENND4BO75064 1496 aaPredicted RBP25.63■■□□□ 1.69
SRM-204ENST00000475189 ADGRL1O94910 1474 aa25.63■■□□□ 1.69
SRM-204ENST00000475189 GPATCH8Q9UKJ3 1502 aaKnown RBP25.61■■□□□ 1.69
SRM-204ENST00000475189 SCAPERQ9BY12 1400 aa25.6■■□□□ 1.69
SRM-204ENST00000475189 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
SRM-204ENST00000475189 SUPT6HQ7KZ85 1726 aaKnown RBP25.59■■□□□ 1.69
SRM-204ENST00000475189 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.69
SRM-204ENST00000475189 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
SRM-204ENST00000475189 NCOA2Q15596 1464 aa25.54■■□□□ 1.68
SRM-204ENST00000475189 POGZQ7Z3K3 1410 aa25.54■■□□□ 1.68
SRM-204ENST00000475189 ITSN2Q9NZM3 1697 aa25.52■■□□□ 1.68
SRM-204ENST00000475189 APLP2Q06481 763 aa25.52■■□□□ 1.68
SRM-204ENST00000475189 CFDP1Q9UEE9 299 aaPredicted RBP25.51■■□□□ 1.67
SRM-204ENST00000475189 ABCC1P33527 1531 aa25.51■■□□□ 1.67
SRM-204ENST00000475189 ZMYM4Q5VZL5 1548 aa25.51■■□□□ 1.67
SRM-204ENST00000475189 SAMD9LQ8IVG5 1584 aa25.51■■□□□ 1.67
SRM-204ENST00000475189 ARHGEF12Q9NZN5 1544 aa25.49■■□□□ 1.67
SRM-204ENST00000475189 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
SRM-204ENST00000475189 ZNF518AQ6AHZ1 1483 aa25.47■■□□□ 1.67
SRM-204ENST00000475189 AFAP1Q8N556 730 aa25.45■■□□□ 1.66
SRM-204ENST00000475189 KDM5CP41229 1560 aa25.44■■□□□ 1.66
SRM-204ENST00000475189 ARHGEF40Q8TER5 1519 aa25.44■■□□□ 1.66
SRM-204ENST00000475189 KDM4FA0A1W2PPD8 638 aa25.44■■□□□ 1.66
SRM-204ENST00000475189 MAGI2Q86UL8 1455 aa25.44■■□□□ 1.66
SRM-204ENST00000475189 TRAPPC8Q9Y2L5 1435 aa25.44■■□□□ 1.66
SRM-204ENST00000475189 SYCP2Q9BX26 1530 aa25.42■■□□□ 1.66
SRM-204ENST00000475189 ZFYVE16Q7Z3T8 1539 aa25.42■■□□□ 1.66
SRM-204ENST00000475189 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
SRM-204ENST00000475189 YEATS2Q9ULM3 1422 aa25.41■■□□□ 1.66
SRM-204ENST00000475189 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
SRM-204ENST00000475189 KIAA1107Q9UPP5 1409 aa25.4■■□□□ 1.66
SRM-204ENST00000475189 HNRNPMP52272 730 aaKnown RBP eCLIP25.4■■□□□ 1.66
SRM-204ENST00000475189 HECW2Q9P2P5 1572 aa25.37■■□□□ 1.65
SRM-204ENST00000475189 MLH3Q9UHC1 1453 aa25.35■■□□□ 1.65
SRM-204ENST00000475189 MYOM3Q5VTT5 1437 aa25.34■■□□□ 1.65
SRM-204ENST00000475189 CAMSAP2Q08AD1 1489 aa25.34■■□□□ 1.65
SRM-204ENST00000475189 MBD5Q9P267 1494 aa25.33■■□□□ 1.65
SRM-204ENST00000475189 KIDINS220Q9ULH0 1771 aa25.32■■□□□ 1.64
SRM-204ENST00000475189 SIGLEC1Q9BZZ2 1709 aa25.32■■□□□ 1.64
SRM-204ENST00000475189 MYT1LQ9UL68 1186 aa25.31■■□□□ 1.64
SRM-204ENST00000475189 ATP10AO60312 1499 aa25.31■■□□□ 1.64
SRM-204ENST00000475189 DIP2CQ9Y2E4 1556 aa25.3■■□□□ 1.64
SRM-204ENST00000475189 ABCA6Q8N139 1617 aa25.29■■□□□ 1.64
SRM-204ENST00000475189 MIA2Q96PC5 1412 aa25.29■■□□□ 1.64
SRM-204ENST00000475189 SPAG9O60271 1321 aaKnown RBP25.27■■□□□ 1.64
SRM-204ENST00000475189 ARID4BQ4LE39 1312 aaPredicted RBP25.27■■□□□ 1.64
SRM-204ENST00000475189 C9orf84Q5VXU9 1444 aa25.27■■□□□ 1.64
SRM-204ENST00000475189 BCORL1Q5H9F3 1711 aa25.26■■□□□ 1.63
SRM-204ENST00000475189 INO80Q9ULG1 1556 aaPredicted RBP25.24■■□□□ 1.63
SRM-204ENST00000475189 ATP7AQ04656 1500 aa25.23■■□□□ 1.63
SRM-204ENST00000475189 ADAMTSL3P82987 1691 aa25.23■■□□□ 1.63
SRM-204ENST00000475189 ARHGEF5Q12774 1597 aa25.22■■□□□ 1.63
SRM-204ENST00000475189 RSPH4AQ5TD94 716 aa25.22■■□□□ 1.63
SRM-204ENST00000475189 REREQ9P2R6 1566 aa25.22■■□□□ 1.63
SRM-204ENST00000475189 CCDC141Q6ZP82 1450 aa25.21■■□□□ 1.63
SRM-204ENST00000475189 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.62
SRM-204ENST00000475189 FGD6Q6ZV73 1430 aa25.19■■□□□ 1.62
SRM-204ENST00000475189 RTEL1-TNFRSF6BF6WH68 1400 aa25.17■■□□□ 1.62
SRM-204ENST00000475189 PPARGC1BQ86YN6 1023 aaKnown RBP25.15■■□□□ 1.62
SRM-204ENST00000475189 TCOF1Q13428 1488 aaKnown RBP25.15■■□□□ 1.62
SRM-204ENST00000475189 MADDQ8WXG6 1647 aa25.14■■□□□ 1.61
SRM-204ENST00000475189 AGLP35573 1532 aa25.13■■□□□ 1.61
SRM-204ENST00000475189 MLECQ14165 292 aa25.13■■□□□ 1.61
SRM-204ENST00000475189 ADGBQ8N7X0 1667 aa25.13■■□□□ 1.61
SRM-204ENST00000475189 TSPY4P0CV99 314 aa25.12■■□□□ 1.61
SRM-204ENST00000475189 TSPY10P0CW01 314 aa25.12■■□□□ 1.61
SRM-204ENST00000475189 A2MP01023 1474 aa25.1■■□□□ 1.61
SRM-204ENST00000475189 MAST1Q9Y2H9 1570 aa25.1■■□□□ 1.61
SRM-204ENST00000475189 PLXNC1O60486 1568 aa25.09■■□□□ 1.61
SRM-204ENST00000475189 RIMS1Q86UR5 1692 aaKnown RBP25.08■■□□□ 1.61
SRM-204ENST00000475189 FER1L4A9Z1Z3 1794 aa25.08■■□□□ 1.6
SRM-204ENST00000475189 CROCC2H7BZ55 1655 aa25.07■■□□□ 1.6
SRM-204ENST00000475189 DNMT1P26358 1616 aaKnown RBP25.06■■□□□ 1.6
SRM-204ENST00000475189 PTPRMP28827 1452 aa25.06■■□□□ 1.6
SRM-204ENST00000475189 ABCC5O15440 1437 aa25.05■■□□□ 1.6
SRM-204ENST00000475189 DHX29Q7Z478 1369 aaKnown RBP25.04■■□□□ 1.6
SRM-204ENST00000475189 DAPK1P53355 1430 aa25.03■■□□□ 1.6
SRM-204ENST00000475189 FAM50AQ14320 339 aaKnown RBP25.01■■□□□ 1.59
SRM-204ENST00000475189 SHANK2Q9UPX8 1470 aa25.01■■□□□ 1.59
SRM-204ENST00000475189 GGT6Q6P531 493 aa24.92■■□□□ 1.58
SRM-204ENST00000475189 CHIC2Q9UKJ5 165 aa24.92■■□□□ 1.58
SRM-204ENST00000475189 KIF3BO15066 747 aa24.91■■□□□ 1.58
SRM-204ENST00000475189 DUOX2Q9NRD8 1548 aa24.9■■□□□ 1.58
SRM-204ENST00000475189 PLPPR3Q6T4P5 718 aa24.89■■□□□ 1.58
SRM-204ENST00000475189 ESF1Q9H501 851 aaKnown RBP24.89■■□□□ 1.58
SRM-204ENST00000475189 RRP7BPQ9NSQ0 103 aa24.89■■□□□ 1.58
SRM-204ENST00000475189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.89■■□□□ 1.57
SRM-204ENST00000475189 KIF15Q9NS87 1388 aa24.89■■□□□ 1.57
SRM-204ENST00000475189 CNTLNQ9NXG0 1405 aa24.88■■□□□ 1.57
SRM-204ENST00000475189 EIF2AK4Q9P2K8 1649 aaKnown RBP24.87■■□□□ 1.57
SRM-204ENST00000475189 CEBPAP49715 358 aaPredicted RBP24.87■■□□□ 1.57
SRM-204ENST00000475189 ANKRD30AQ9BXX3 1397 aa24.87■■□□□ 1.57
SRM-204ENST00000475189 ADGRL2O95490 1459 aa24.87■■□□□ 1.57
SRM-204ENST00000475189 C3P01024 1663 aa24.87■■□□□ 1.57
SRM-204ENST00000475189 CLTCQ00610 1675 aaKnown RBP24.87■■□□□ 1.57
SRM-204ENST00000475189 PTPRKQ15262 1439 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms