RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 ARHGAP5Q13017 1502 aa35.78■■■■□ 3.32
YIF1A-206ENST00000474986 GPATCH8Q9UKJ3 1502 aaKnown RBP35.78■■■■□ 3.32
YIF1A-206ENST00000474986 KANK4Q5T7N3 995 aaPredicted RBP35.78■■■■□ 3.32
YIF1A-206ENST00000474986 SUPT6HQ7KZ85 1726 aaKnown RBP35.76■■■■□ 3.31
YIF1A-206ENST00000474986 NCOA2Q15596 1464 aa35.75■■■■□ 3.31
YIF1A-206ENST00000474986 CDC42BPAQ5VT25 1732 aa35.72■■■■□ 3.31
YIF1A-206ENST00000474986 CDC42BPBQ9Y5S2 1711 aa35.71■■■■□ 3.31
YIF1A-206ENST00000474986 ADGRL1O94910 1474 aa35.71■■■■□ 3.31
YIF1A-206ENST00000474986 DENND4BO75064 1496 aaPredicted RBP35.69■■■■□ 3.3
YIF1A-206ENST00000474986 CFDP1Q9UEE9 299 aaPredicted RBP35.67■■■■□ 3.3
YIF1A-206ENST00000474986 SCAPERQ9BY12 1400 aa35.66■■■■□ 3.3
YIF1A-206ENST00000474986 RAPGEF3O95398 923 aa35.64■■■■□ 3.3
YIF1A-206ENST00000474986 ITSN2Q9NZM3 1697 aa35.62■■■■□ 3.29
YIF1A-206ENST00000474986 POGZQ7Z3K3 1410 aa35.59■■■■□ 3.29
YIF1A-206ENST00000474986 FRMPD1Q5SYB0 1578 aa35.59■■■■□ 3.29
YIF1A-206ENST00000474986 ABCC1P33527 1531 aa35.57■■■■□ 3.29
YIF1A-206ENST00000474986 PLEKHH2Q8IVE3 1493 aa35.57■■■■□ 3.28
YIF1A-206ENST00000474986 RICTORQ6R327 1708 aa35.55■■■■□ 3.28
YIF1A-206ENST00000474986 ZNF777Q9ULD5 760 aaPredicted RBP35.55■■■■□ 3.28
YIF1A-206ENST00000474986 KIAA1107Q9UPP5 1409 aa35.54■■■■□ 3.28
YIF1A-206ENST00000474986 SAMD9LQ8IVG5 1584 aa35.54■■■■□ 3.28
YIF1A-206ENST00000474986 ZNF518AQ6AHZ1 1483 aa35.53■■■■□ 3.28
YIF1A-206ENST00000474986 MYOM3Q5VTT5 1437 aa35.52■■■■□ 3.28
YIF1A-206ENST00000474986 ZMYM4Q5VZL5 1548 aa35.51■■■■□ 3.27
YIF1A-206ENST00000474986 AEBP2Q6ZN18 517 aaPredicted RBP35.5■■■■□ 3.27
YIF1A-206ENST00000474986 ARHGEF12Q9NZN5 1544 aa35.49■■■■□ 3.27
YIF1A-206ENST00000474986 MIA2Q96PC5 1412 aa35.49■■■■□ 3.27
YIF1A-206ENST00000474986 MAGI2Q86UL8 1455 aa35.48■■■■□ 3.27
YIF1A-206ENST00000474986 KDM5CP41229 1560 aa35.44■■■■□ 3.26
YIF1A-206ENST00000474986 SYCP2Q9BX26 1530 aa35.44■■■■□ 3.26
YIF1A-206ENST00000474986 TRAPPC8Q9Y2L5 1435 aa35.44■■■■□ 3.26
YIF1A-206ENST00000474986 ZNF644Q9H582 1327 aaPredicted RBP35.43■■■■□ 3.26
YIF1A-206ENST00000474986 AFAP1Q8N556 730 aa35.43■■■■□ 3.26
YIF1A-206ENST00000474986 CAMSAP2Q08AD1 1489 aa35.41■■■■□ 3.26
YIF1A-206ENST00000474986 HNRNPMP52272 730 aaKnown RBP eCLIP35.4■■■■□ 3.26
YIF1A-206ENST00000474986 MBD5Q9P267 1494 aa35.38■■■■□ 3.25
YIF1A-206ENST00000474986 ARHGEF40Q8TER5 1519 aa35.37■■■■□ 3.25
YIF1A-206ENST00000474986 MLH3Q9UHC1 1453 aa35.36■■■■□ 3.25
YIF1A-206ENST00000474986 RSPH4AQ5TD94 716 aa35.35■■■■□ 3.25
YIF1A-206ENST00000474986 ZFYVE16Q7Z3T8 1539 aa35.35■■■■□ 3.25
YIF1A-206ENST00000474986 FGD6Q6ZV73 1430 aa35.33■■■■□ 3.25
YIF1A-206ENST00000474986 HECW2Q9P2P5 1572 aa35.32■■■■□ 3.24
YIF1A-206ENST00000474986 YEATS2Q9ULM3 1422 aa35.32■■■■□ 3.24
YIF1A-206ENST00000474986 SPAG9O60271 1321 aaKnown RBP35.28■■■■□ 3.24
YIF1A-206ENST00000474986 CCDC141Q6ZP82 1450 aa35.28■■■■□ 3.24
YIF1A-206ENST00000474986 ARHGEF5Q12774 1597 aa35.27■■■■□ 3.24
YIF1A-206ENST00000474986 TCOF1Q13428 1488 aaKnown RBP35.25■■■■□ 3.23
YIF1A-206ENST00000474986 MYT1LQ9UL68 1186 aa35.24■■■■□ 3.23
YIF1A-206ENST00000474986 PTPN23Q9H3S7 1636 aa35.24■■■■□ 3.23
YIF1A-206ENST00000474986 ATP10AO60312 1499 aa35.23■■■■□ 3.23
YIF1A-206ENST00000474986 PPARGC1BQ86YN6 1023 aaKnown RBP35.21■■■■□ 3.23
YIF1A-206ENST00000474986 RTEL1-TNFRSF6BF6WH68 1400 aa35.2■■■■□ 3.23
YIF1A-206ENST00000474986 INO80Q9ULG1 1556 aaPredicted RBP35.18■■■■□ 3.22
YIF1A-206ENST00000474986 ATP7AQ04656 1500 aa35.18■■■■□ 3.22
YIF1A-206ENST00000474986 C9orf84Q5VXU9 1444 aa35.18■■■■□ 3.22
YIF1A-206ENST00000474986 KIDINS220Q9ULH0 1771 aa35.18■■■■□ 3.22
YIF1A-206ENST00000474986 DIP2CQ9Y2E4 1556 aa35.17■■■■□ 3.22
YIF1A-206ENST00000474986 TSPY4P0CV99 314 aa35.15■■■■□ 3.22
YIF1A-206ENST00000474986 TSPY10P0CW01 314 aa35.15■■■■□ 3.22
YIF1A-206ENST00000474986 ABCA6Q8N139 1617 aa35.14■■■■□ 3.22
YIF1A-206ENST00000474986 REREQ9P2R6 1566 aa35.13■■■■□ 3.21
YIF1A-206ENST00000474986 KDM4FA0A1W2PPD8 638 aa35.1■■■■□ 3.21
YIF1A-206ENST00000474986 ARID4BQ4LE39 1312 aaPredicted RBP35.08■■■■□ 3.21
YIF1A-206ENST00000474986 MAST1Q9Y2H9 1570 aa35.07■■■■□ 3.2
YIF1A-206ENST00000474986 ABCC5O15440 1437 aa35.06■■■■□ 3.2
YIF1A-206ENST00000474986 SHANK2Q9UPX8 1470 aa35.06■■■■□ 3.2
YIF1A-206ENST00000474986 FAM50AQ14320 339 aaKnown RBP35.05■■■■□ 3.2
YIF1A-206ENST00000474986 DAPK1P53355 1430 aa35.05■■■■□ 3.2
YIF1A-206ENST00000474986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.04■■■■□ 3.21e-8■■■■□ 23.1
YIF1A-206ENST00000474986 DNMT1P26358 1616 aaKnown RBP35.04■■■■□ 3.2
YIF1A-206ENST00000474986 AGLP35573 1532 aa35.02■■■■□ 3.2
YIF1A-206ENST00000474986 A2MP01023 1474 aa35.01■■■■□ 3.19
YIF1A-206ENST00000474986 SIGLEC1Q9BZZ2 1709 aa34.99■■■■□ 3.19
YIF1A-206ENST00000474986 RRBP1Q9P2E9 1410 aaKnown RBP34.98■■■■□ 3.19
YIF1A-206ENST00000474986 ADGBQ8N7X0 1667 aa34.97■■■■□ 3.19
YIF1A-206ENST00000474986 PLXNC1O60486 1568 aa34.96■■■■□ 3.19
YIF1A-206ENST00000474986 CROCC2H7BZ55 1655 aa34.96■■■■□ 3.19
YIF1A-206ENST00000474986 BCORL1Q5H9F3 1711 aa34.96■■■■□ 3.19
YIF1A-206ENST00000474986 DHX29Q7Z478 1369 aaKnown RBP34.95■■■■□ 3.19
YIF1A-206ENST00000474986 ADAMTSL3P82987 1691 aa34.9■■■■□ 3.18
YIF1A-206ENST00000474986 ANKRD30AQ9BXX3 1397 aa34.86■■■■□ 3.17
YIF1A-206ENST00000474986 ADGRL2O95490 1459 aa34.85■■■■□ 3.17
YIF1A-206ENST00000474986 MLECQ14165 292 aa34.85■■■■□ 3.17
YIF1A-206ENST00000474986 KIF15Q9NS87 1388 aa34.84■■■■□ 3.17
YIF1A-206ENST00000474986 NCOA1Q15788 1441 aa34.82■■■■□ 3.17
YIF1A-206ENST00000474986 CHIC2Q9UKJ5 165 aa34.82■■■■□ 3.16
YIF1A-206ENST00000474986 DUOX2Q9NRD8 1548 aa34.81■■■■□ 3.16
YIF1A-206ENST00000474986 PTPRKQ15262 1439 aa34.8■■■■□ 3.16
YIF1A-206ENST00000474986 MADDQ8WXG6 1647 aa34.78■■■■□ 3.16
YIF1A-206ENST00000474986 RRP7BPQ9NSQ0 103 aa34.77■■■■□ 3.16
YIF1A-206ENST00000474986 ROCK1Q13464 1354 aa34.76■■■■□ 3.16
YIF1A-206ENST00000474986 ERBINQ96RT1 1412 aa34.75■■■■□ 3.15
YIF1A-206ENST00000474986 PPP6R1Q9UPN7 881 aa34.75■■■■□ 3.15
YIF1A-206ENST00000474986 KIF3BO15066 747 aa34.74■■■■□ 3.15
YIF1A-206ENST00000474986 PTPRMP28827 1452 aa34.71■■■■□ 3.15
YIF1A-206ENST00000474986 EIF2AK4Q9P2K8 1649 aaKnown RBP34.71■■■■□ 3.15
YIF1A-206ENST00000474986 GGT6Q6P531 493 aa34.7■■■■□ 3.15
YIF1A-206ENST00000474986 CNTLNQ9NXG0 1405 aa34.7■■■■□ 3.15
YIF1A-206ENST00000474986 FER1L4A9Z1Z3 1794 aa34.69■■■■□ 3.14
YIF1A-206ENST00000474986 ITGAEP38570 1179 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms