RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
DDX39B-217ENST00000474961 KDM5BQ9UGL1 1544 aa14.83□□□□□ -0.04
DDX39B-217ENST00000474961 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
DDX39B-217ENST00000474961 PPARGC1BQ86YN6 1023 aaKnown RBP14.81□□□□□ -0.04
DDX39B-217ENST00000474961 MAGI3Q5TCQ9 1506 aa14.79□□□□□ -0.04
DDX39B-217ENST00000474961 LRRC9Q6ZRR7 1453 aa14.79□□□□□ -0.04
DDX39B-217ENST00000474961 NPM1P06748 294 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX39B-217ENST00000474961 CDK11AQ9UQ88 783 aaPredicted RBP14.78□□□□□ -0.04
DDX39B-217ENST00000474961 MTUS2Q5JR59 1369 aa14.77□□□□□ -0.04
DDX39B-217ENST00000474961 PLEKHD1A6NEE1 506 aa14.76□□□□□ -0.05
DDX39B-217ENST00000474961 EHBP1L1Q8N3D4 1523 aa14.76□□□□□ -0.05
DDX39B-217ENST00000474961 TROQ12816 1431 aaPredicted RBP14.75□□□□□ -0.05
DDX39B-217ENST00000474961 SUPT6HQ7KZ85 1726 aaKnown RBP14.72□□□□□ -0.05
DDX39B-217ENST00000474961 ASXL2Q76L83 1435 aa14.72□□□□□ -0.05
DDX39B-217ENST00000474961 KIF14Q15058 1648 aa14.7□□□□□ -0.06
DDX39B-217ENST00000474961 WDR7Q9Y4E6 1490 aa14.7□□□□□ -0.06
DDX39B-217ENST00000474961 MAPKBP1O60336 1514 aa14.69□□□□□ -0.06
DDX39B-217ENST00000474961 KCNH8Q96L42 1107 aa14.68□□□□□ -0.06
DDX39B-217ENST00000474961 NCOA2Q15596 1464 aa14.68□□□□□ -0.06
DDX39B-217ENST00000474961 ABCC10Q5T3U5 1492 aa14.64□□□□□ -0.07
DDX39B-217ENST00000474961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.64□□□□□ -0.07
DDX39B-217ENST00000474961 PHLDB1Q86UU1 1377 aa14.63□□□□□ -0.07
DDX39B-217ENST00000474961 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
DDX39B-217ENST00000474961 TTC37Q6PGP7 1564 aa14.63□□□□□ -0.07
DDX39B-217ENST00000474961 CDC42BPAQ5VT25 1732 aa14.63□□□□□ -0.07
DDX39B-217ENST00000474961 CCNB3Q8WWL7 1395 aa14.61□□□□□ -0.07
DDX39B-217ENST00000474961 ABCA9Q8IUA7 1624 aa14.6□□□□□ -0.07
DDX39B-217ENST00000474961 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
DDX39B-217ENST00000474961 ITSN2Q9NZM3 1697 aa14.6□□□□□ -0.07
DDX39B-217ENST00000474961 MYO5CQ9NQX4 1742 aa14.6□□□□□ -0.07
DDX39B-217ENST00000474961 MYOM3Q5VTT5 1437 aa14.59□□□□□ -0.07
DDX39B-217ENST00000474961 CDC42BPBQ9Y5S2 1711 aa14.59□□□□□ -0.07
DDX39B-217ENST00000474961 GPATCH8Q9UKJ3 1502 aaKnown RBP14.59□□□□□ -0.07
DDX39B-217ENST00000474961 GLI2P10070 1586 aa14.58□□□□□ -0.08
DDX39B-217ENST00000474961 DIP2BQ9P265 1576 aa14.58□□□□□ -0.08
DDX39B-217ENST00000474961 KIF13AQ9H1H9 1805 aa14.57□□□□□ -0.08
DDX39B-217ENST00000474961 PREX2Q70Z35 1606 aa14.57□□□□□ -0.08
DDX39B-217ENST00000474961 FGD6Q6ZV73 1430 aa14.56□□□□□ -0.08
DDX39B-217ENST00000474961 RRBP1Q9P2E9 1410 aaKnown RBP14.55□□□□□ -0.08
DDX39B-217ENST00000474961 MAP3K4Q9Y6R4 1608 aa14.55□□□□□ -0.08
DDX39B-217ENST00000474961 FAM69CQ0P6D2 419 aa14.54□□□□□ -0.08
DDX39B-217ENST00000474961 PLCH2O75038 1416 aa14.54□□□□□ -0.08
DDX39B-217ENST00000474961 MIA2Q96PC5 1412 aa14.54□□□□□ -0.08
DDX39B-217ENST00000474961 PTPN23Q9H3S7 1636 aa14.54□□□□□ -0.08
DDX39B-217ENST00000474961 CD109Q6YHK3 1445 aa14.53□□□□□ -0.08
DDX39B-217ENST00000474961 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
DDX39B-217ENST00000474961 CFDP1Q9UEE9 299 aaPredicted RBP14.53□□□□□ -0.08
DDX39B-217ENST00000474961 ARHGAP5Q13017 1502 aa14.52□□□□□ -0.08
DDX39B-217ENST00000474961 TSPOAP1O95153 1857 aa14.52□□□□□ -0.09
DDX39B-217ENST00000474961 ARAP3Q8WWN8 1544 aa14.51□□□□□ -0.09
DDX39B-217ENST00000474961 FAM50AQ14320 339 aaKnown RBP14.5□□□□□ -0.09
DDX39B-217ENST00000474961 ZNF777Q9ULD5 760 aaPredicted RBP14.5□□□□□ -0.09
DDX39B-217ENST00000474961 TCOF1Q13428 1488 aaKnown RBP14.5□□□□□ -0.09
DDX39B-217ENST00000474961 ZNF644Q9H582 1327 aaPredicted RBP14.49□□□□□ -0.09
DDX39B-217ENST00000474961 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
DDX39B-217ENST00000474961 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
DDX39B-217ENST00000474961 SPDYE2Q495Y8 402 aa14.49□□□□□ -0.09
DDX39B-217ENST00000474961 EFCAB2Q5VUJ9 269 aa14.49□□□□□ -0.09
DDX39B-217ENST00000474961 SAMD9LQ8IVG5 1584 aa14.48□□□□□ -0.09
DDX39B-217ENST00000474961 CAMSAP2Q08AD1 1489 aa14.48□□□□□ -0.09
DDX39B-217ENST00000474961 PPRC1Q5VV67 1664 aaKnown RBP14.48□□□□□ -0.09
DDX39B-217ENST00000474961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.09
DDX39B-217ENST00000474961 CFAP74Q9C0B2 1584 aa14.47□□□□□ -0.09
DDX39B-217ENST00000474961 FANCAO15360 1455 aa14.46□□□□□ -0.09
DDX39B-217ENST00000474961 PLEKHH2Q8IVE3 1493 aa14.44□□□□□ -0.1
DDX39B-217ENST00000474961 AKNAQ7Z591 1439 aa14.43□□□□□ -0.1
DDX39B-217ENST00000474961 NEO1Q92859 1461 aa14.43□□□□□ -0.1
DDX39B-217ENST00000474961 ABCC1P33527 1531 aa14.42□□□□□ -0.1
DDX39B-217ENST00000474961 DNMT1P26358 1616 aaKnown RBP14.42□□□□□ -0.1
DDX39B-217ENST00000474961 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.1
DDX39B-217ENST00000474961 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
DDX39B-217ENST00000474961 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
DDX39B-217ENST00000474961 SYCP2Q9BX26 1530 aa14.41□□□□□ -0.1
DDX39B-217ENST00000474961 ITGAEP38570 1179 aa14.41□□□□□ -0.1
DDX39B-217ENST00000474961 PCGF6Q9BYE7 350 aa14.41□□□□□ -0.1
DDX39B-217ENST00000474961 TEX14Q8IWB6 1497 aa14.41□□□□□ -0.1
DDX39B-217ENST00000474961 ARHGEF12Q9NZN5 1544 aa14.41□□□□□ -0.1
DDX39B-217ENST00000474961 ARHGEF5Q12774 1597 aa14.4□□□□□ -0.1
DDX39B-217ENST00000474961 ADGRL1O94910 1474 aa14.4□□□□□ -0.1
DDX39B-217ENST00000474961 MBD5Q9P267 1494 aa14.4□□□□□ -0.1
DDX39B-217ENST00000474961 CROCC2H7BZ55 1655 aa14.39□□□□□ -0.11
DDX39B-217ENST00000474961 ABCC5O15440 1437 aa14.39□□□□□ -0.11
DDX39B-217ENST00000474961 DAPK1P53355 1430 aa14.39□□□□□ -0.11
DDX39B-217ENST00000474961 SCAPERQ9BY12 1400 aa14.39□□□□□ -0.11
DDX39B-217ENST00000474961 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
DDX39B-217ENST00000474961 RSPH4AQ5TD94 716 aa14.37□□□□□ -0.11
DDX39B-217ENST00000474961 PTPRKQ15262 1439 aa14.37□□□□□ -0.11
DDX39B-217ENST00000474961 CCDC141Q6ZP82 1450 aa14.37□□□□□ -0.11
DDX39B-217ENST00000474961 TRAPPC8Q9Y2L5 1435 aa14.36□□□□□ -0.11
DDX39B-217ENST00000474961 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
DDX39B-217ENST00000474961 ADGBQ8N7X0 1667 aa14.34□□□□□ -0.11
DDX39B-217ENST00000474961 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
DDX39B-217ENST00000474961 DENND4BO75064 1496 aaPredicted RBP14.33□□□□□ -0.12
DDX39B-217ENST00000474961 SHANK2Q9UPX8 1470 aa14.33□□□□□ -0.12
DDX39B-217ENST00000474961 RICTORQ6R327 1708 aa14.33□□□□□ -0.12
DDX39B-217ENST00000474961 TSPY4P0CV99 314 aa14.33□□□□□ -0.12
DDX39B-217ENST00000474961 TSPY10P0CW01 314 aa14.33□□□□□ -0.12
DDX39B-217ENST00000474961 AFAP1Q8N556 730 aa14.33□□□□□ -0.12
DDX39B-217ENST00000474961 MAST1Q9Y2H9 1570 aa14.32□□□□□ -0.12
DDX39B-217ENST00000474961 C9orf84Q5VXU9 1444 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms