RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
COPS6-208ENST00000474823 NCOA2Q15596 1464 aa16.4■□□□□ 0.22
COPS6-208ENST00000474823 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
COPS6-208ENST00000474823 PREX2Q70Z35 1606 aa16.39■□□□□ 0.21
COPS6-208ENST00000474823 CFDP1Q9UEE9 299 aaPredicted RBP16.39■□□□□ 0.21
COPS6-208ENST00000474823 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
COPS6-208ENST00000474823 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
COPS6-208ENST00000474823 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
COPS6-208ENST00000474823 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
COPS6-208ENST00000474823 CDC42BPBQ9Y5S2 1711 aa16.37■□□□□ 0.21
COPS6-208ENST00000474823 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
COPS6-208ENST00000474823 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
COPS6-208ENST00000474823 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
COPS6-208ENST00000474823 RAPGEF3O95398 923 aa16.35■□□□□ 0.21
COPS6-208ENST00000474823 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
COPS6-208ENST00000474823 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
COPS6-208ENST00000474823 ABCC1P33527 1531 aa16.29■□□□□ 0.2
COPS6-208ENST00000474823 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
COPS6-208ENST00000474823 SAMD9LQ8IVG5 1584 aa16.28■□□□□ 0.2
COPS6-208ENST00000474823 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
COPS6-208ENST00000474823 FRMPD1Q5SYB0 1578 aa16.27■□□□□ 0.2
COPS6-208ENST00000474823 HNRNPMP52272 730 aaKnown RBP eCLIP16.27■□□□□ 0.2
COPS6-208ENST00000474823 MYT1LQ9UL68 1186 aa16.27■□□□□ 0.2
COPS6-208ENST00000474823 RICTORQ6R327 1708 aa16.27■□□□□ 0.19
COPS6-208ENST00000474823 KIAA1107Q9UPP5 1409 aa16.27■□□□□ 0.19
COPS6-208ENST00000474823 ZNF644Q9H582 1327 aaPredicted RBP16.26■□□□□ 0.19
COPS6-208ENST00000474823 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
COPS6-208ENST00000474823 PPARGC1BQ86YN6 1023 aaKnown RBP16.26■□□□□ 0.19
COPS6-208ENST00000474823 AFAP1Q8N556 730 aa16.26■□□□□ 0.19
COPS6-208ENST00000474823 MIA2Q96PC5 1412 aa16.26■□□□□ 0.19
COPS6-208ENST00000474823 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
COPS6-208ENST00000474823 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
COPS6-208ENST00000474823 TRAPPC8Q9Y2L5 1435 aa16.24■□□□□ 0.19
COPS6-208ENST00000474823 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
COPS6-208ENST00000474823 MAGI2Q86UL8 1455 aa16.23■□□□□ 0.19
COPS6-208ENST00000474823 ZMYM4Q5VZL5 1548 aa16.23■□□□□ 0.19
COPS6-208ENST00000474823 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
COPS6-208ENST00000474823 KDM5CP41229 1560 aa16.21■□□□□ 0.18
COPS6-208ENST00000474823 FGD6Q6ZV73 1430 aa16.2■□□□□ 0.18
COPS6-208ENST00000474823 ZFYVE16Q7Z3T8 1539 aa16.2■□□□□ 0.18
COPS6-208ENST00000474823 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
COPS6-208ENST00000474823 HECW2Q9P2P5 1572 aa16.18■□□□□ 0.18
COPS6-208ENST00000474823 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
COPS6-208ENST00000474823 MLH3Q9UHC1 1453 aa16.18■□□□□ 0.18
COPS6-208ENST00000474823 ARHGEF40Q8TER5 1519 aa16.18■□□□□ 0.18
COPS6-208ENST00000474823 CCDC141Q6ZP82 1450 aa16.17■□□□□ 0.18
COPS6-208ENST00000474823 PTPN23Q9H3S7 1636 aa16.17■□□□□ 0.18
COPS6-208ENST00000474823 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
COPS6-208ENST00000474823 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
COPS6-208ENST00000474823 YEATS2Q9ULM3 1422 aa16.17■□□□□ 0.18
COPS6-208ENST00000474823 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
COPS6-208ENST00000474823 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
COPS6-208ENST00000474823 ARHGEF5Q12774 1597 aa16.15■□□□□ 0.18
COPS6-208ENST00000474823 ATP10AO60312 1499 aa16.15■□□□□ 0.18
COPS6-208ENST00000474823 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
COPS6-208ENST00000474823 ATP7AQ04656 1500 aa16.13■□□□□ 0.17
COPS6-208ENST00000474823 C9orf84Q5VXU9 1444 aa16.12■□□□□ 0.17
COPS6-208ENST00000474823 RTEL1-TNFRSF6BF6WH68 1400 aa16.11■□□□□ 0.17
COPS6-208ENST00000474823 KIDINS220Q9ULH0 1771 aa16.11■□□□□ 0.17
COPS6-208ENST00000474823 INO80Q9ULG1 1556 aaPredicted RBP16.1■□□□□ 0.17
COPS6-208ENST00000474823 DIP2CQ9Y2E4 1556 aa16.1■□□□□ 0.17
COPS6-208ENST00000474823 ABCA6Q8N139 1617 aa16.09■□□□□ 0.17
COPS6-208ENST00000474823 ABCC5O15440 1437 aa16.08■□□□□ 0.16
COPS6-208ENST00000474823 DAPK1P53355 1430 aa16.08■□□□□ 0.16
COPS6-208ENST00000474823 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
COPS6-208ENST00000474823 REREQ9P2R6 1566 aa16.05■□□□□ 0.16
COPS6-208ENST00000474823 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
COPS6-208ENST00000474823 A2MP01023 1474 aa16.05■□□□□ 0.16
COPS6-208ENST00000474823 SHANK2Q9UPX8 1470 aa16.05■□□□□ 0.16
COPS6-208ENST00000474823 MLECQ14165 292 aa16.05■□□□□ 0.16
COPS6-208ENST00000474823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.169e-7■■□□□ 13.7
COPS6-208ENST00000474823 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
COPS6-208ENST00000474823 ADGBQ8N7X0 1667 aa16.03■□□□□ 0.16
COPS6-208ENST00000474823 KDM4FA0A1W2PPD8 638 aa16.03■□□□□ 0.16
COPS6-208ENST00000474823 CHIC2Q9UKJ5 165 aa16.03■□□□□ 0.16
COPS6-208ENST00000474823 CROCC2H7BZ55 1655 aa16.02■□□□□ 0.16
COPS6-208ENST00000474823 ITGAEP38570 1179 aa16.02■□□□□ 0.16
COPS6-208ENST00000474823 AGLP35573 1532 aa16.02■□□□□ 0.15
COPS6-208ENST00000474823 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
COPS6-208ENST00000474823 ANKRD30AQ9BXX3 1397 aa16.01■□□□□ 0.15
COPS6-208ENST00000474823 BCORL1Q5H9F3 1711 aa16■□□□□ 0.15
COPS6-208ENST00000474823 SIGLEC1Q9BZZ2 1709 aa16■□□□□ 0.15
COPS6-208ENST00000474823 RRP7BPQ9NSQ0 103 aa16■□□□□ 0.15
COPS6-208ENST00000474823 PLXNC1O60486 1568 aa16■□□□□ 0.15
COPS6-208ENST00000474823 KIF15Q9NS87 1388 aa15.99■□□□□ 0.15
COPS6-208ENST00000474823 ESF1Q9H501 851 aaKnown RBP15.98■□□□□ 0.15
COPS6-208ENST00000474823 KIF3BO15066 747 aa15.97■□□□□ 0.15
COPS6-208ENST00000474823 DUOX2Q9NRD8 1548 aa15.96■□□□□ 0.15
COPS6-208ENST00000474823 GGT6Q6P531 493 aa15.96■□□□□ 0.15
COPS6-208ENST00000474823 ADAMTSL3P82987 1691 aa15.95■□□□□ 0.14
COPS6-208ENST00000474823 NCOA1Q15788 1441 aa15.95■□□□□ 0.14
COPS6-208ENST00000474823 ADGRL2O95490 1459 aa15.95■□□□□ 0.14
COPS6-208ENST00000474823 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
COPS6-208ENST00000474823 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
COPS6-208ENST00000474823 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
COPS6-208ENST00000474823 ERBINQ96RT1 1412 aa15.93■□□□□ 0.14
COPS6-208ENST00000474823 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
COPS6-208ENST00000474823 FER1L4A9Z1Z3 1794 aa15.91■□□□□ 0.14
COPS6-208ENST00000474823 RIMS1Q86UR5 1692 aaKnown RBP15.9■□□□□ 0.14
COPS6-208ENST00000474823 PTPRMP28827 1452 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms