RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 PTPRKQ15262 1439 aa30.47■■■□□ 2.47
EDEM3-206ENST00000474725 MYO5CQ9NQX4 1742 aa30.46■■■□□ 2.47
EDEM3-206ENST00000474725 PLCH2O75038 1416 aa30.44■■■□□ 2.46
EDEM3-206ENST00000474725 MAPKBP1O60336 1514 aa30.43■■■□□ 2.46
EDEM3-206ENST00000474725 ARHGAP5Q13017 1502 aa30.42■■■□□ 2.46
EDEM3-206ENST00000474725 ABCA9Q8IUA7 1624 aa30.42■■■□□ 2.46
EDEM3-206ENST00000474725 ABCC5O15440 1437 aa30.38■■■□□ 2.45
EDEM3-206ENST00000474725 DAPK1P53355 1430 aa30.38■■■□□ 2.45
EDEM3-206ENST00000474725 DNMT1P26358 1616 aaKnown RBP30.38■■■□□ 2.45
EDEM3-206ENST00000474725 SAMD9LQ8IVG5 1584 aa30.37■■■□□ 2.45
EDEM3-206ENST00000474725 CHIC2Q9UKJ5 165 aa30.34■■■□□ 2.45
EDEM3-206ENST00000474725 EFCAB2Q5VUJ9 269 aa30.34■■■□□ 2.45
EDEM3-206ENST00000474725 SETD5Q9C0A6 1442 aa30.32■■■□□ 2.44
EDEM3-206ENST00000474725 ARAP3Q8WWN8 1544 aa30.32■■■□□ 2.44
EDEM3-206ENST00000474725 HNRNPMP52272 730 aaKnown RBP eCLIP30.32■■■□□ 2.44
EDEM3-206ENST00000474725 HRCP23327 699 aa30.28■■■□□ 2.44
EDEM3-206ENST00000474725 MBD5Q9P267 1494 aa30.28■■■□□ 2.44
EDEM3-206ENST00000474725 RAB3GAP2Q9H2M9 1393 aa30.27■■■□□ 2.44
EDEM3-206ENST00000474725 HFM1A2PYH4 1435 aa30.25■■■□□ 2.43
EDEM3-206ENST00000474725 CD109Q6YHK3 1445 aa30.25■■■□□ 2.43
EDEM3-206ENST00000474725 PLEKHH2Q8IVE3 1493 aa30.25■■■□□ 2.43
EDEM3-206ENST00000474725 ARHGEF5Q12774 1597 aa30.25■■■□□ 2.43
EDEM3-206ENST00000474725 RRP7BPQ9NSQ0 103 aa30.25■■■□□ 2.43
EDEM3-206ENST00000474725 AKNAQ7Z591 1439 aa30.25■■■□□ 2.43
EDEM3-206ENST00000474725 SYCP2Q9BX26 1530 aa30.25■■■□□ 2.43
EDEM3-206ENST00000474725 CROCC2H7BZ55 1655 aa30.24■■■□□ 2.43
EDEM3-206ENST00000474725 KIAA1107Q9UPP5 1409 aa30.24■■■□□ 2.43
EDEM3-206ENST00000474725 FANCAO15360 1455 aa30.23■■■□□ 2.43
EDEM3-206ENST00000474725 NAIPQ13075 1403 aa30.22■■■□□ 2.43
EDEM3-206ENST00000474725 CCER1Q8TC90 406 aaPredicted RBP30.22■■■□□ 2.43
EDEM3-206ENST00000474725 ROCK1Q13464 1354 aa30.21■■■□□ 2.43
EDEM3-206ENST00000474725 ARHGEF12Q9NZN5 1544 aa30.21■■■□□ 2.43
EDEM3-206ENST00000474725 RSPH4AQ5TD94 716 aa30.2■■■□□ 2.43
EDEM3-206ENST00000474725 DNAJC5Q9H3Z4 198 aa30.2■■■□□ 2.42
EDEM3-206ENST00000474725 CCDC141Q6ZP82 1450 aa30.2■■■□□ 2.42
EDEM3-206ENST00000474725 GLI2P10070 1586 aa30.19■■■□□ 2.42
EDEM3-206ENST00000474725 ABCC1P33527 1531 aa30.19■■■□□ 2.42
EDEM3-206ENST00000474725 TSPY4P0CV99 314 aa30.18■■■□□ 2.42
EDEM3-206ENST00000474725 TSPY10P0CW01 314 aa30.18■■■□□ 2.42
EDEM3-206ENST00000474725 SHANK2Q9UPX8 1470 aa30.17■■■□□ 2.42
EDEM3-206ENST00000474725 FAM69CQ0P6D2 419 aa30.16■■■□□ 2.42
EDEM3-206ENST00000474725 DIP2BQ9P265 1576 aa30.16■■■□□ 2.42
EDEM3-206ENST00000474725 C9orf84Q5VXU9 1444 aa30.15■■■□□ 2.42
EDEM3-206ENST00000474725 ADGBQ8N7X0 1667 aa30.14■■■□□ 2.42
EDEM3-206ENST00000474725 GCC2Q8IWJ2 1684 aa30.14■■■□□ 2.42
EDEM3-206ENST00000474725 ADGRL2O95490 1459 aa30.14■■■□□ 2.42
EDEM3-206ENST00000474725 MAP3K4Q9Y6R4 1608 aa30.14■■■□□ 2.41
EDEM3-206ENST00000474725 NCOA1Q15788 1441 aa30.13■■■□□ 2.41
EDEM3-206ENST00000474725 ANKRD30AQ9BXX3 1397 aa30.11■■■□□ 2.41
EDEM3-206ENST00000474725 TRAPPC8Q9Y2L5 1435 aa30.11■■■□□ 2.41
EDEM3-206ENST00000474725 ADGRL1O94910 1474 aa30.09■■■□□ 2.41
EDEM3-206ENST00000474725 CFAP74Q9C0B2 1584 aa30.07■■■□□ 2.4
EDEM3-206ENST00000474725 DHX57Q6P158 1386 aaKnown RBP30.07■■■□□ 2.4
EDEM3-206ENST00000474725 SCAPERQ9BY12 1400 aa30.07■■■□□ 2.4
EDEM3-206ENST00000474725 KDM6BO15054 1643 aa30.06■■■□□ 2.4
EDEM3-206ENST00000474725 MAST1Q9Y2H9 1570 aa30.05■■■□□ 2.4
EDEM3-206ENST00000474725 AFAP1Q8N556 730 aa30.04■■■□□ 2.4
EDEM3-206ENST00000474725 NEO1Q92859 1461 aa30.02■■■□□ 2.4
EDEM3-206ENST00000474725 KIF13AQ9H1H9 1805 aa29.98■■■□□ 2.39
EDEM3-206ENST00000474725 KIF15Q9NS87 1388 aa29.98■■■□□ 2.39
EDEM3-206ENST00000474725 SPAG9O60271 1321 aaKnown RBP29.96■■■□□ 2.39
EDEM3-206ENST00000474725 TSPOAP1O95153 1857 aa29.94■■■□□ 2.38
EDEM3-206ENST00000474725 ZEB1P37275 1124 aaPredicted RBP29.94■■■□□ 2.38
EDEM3-206ENST00000474725 ANKRD50Q9ULJ7 1429 aa29.93■■■□□ 2.38
EDEM3-206ENST00000474725 PPRC1Q5VV67 1664 aaKnown RBP29.93■■■□□ 2.38
EDEM3-206ENST00000474725 PLXNC1O60486 1568 aa29.92■■■□□ 2.38
EDEM3-206ENST00000474725 RTEL1-TNFRSF6BF6WH68 1400 aa29.92■■■□□ 2.38
EDEM3-206ENST00000474725 TRIM52Q96A61 297 aa29.9■■■□□ 2.38
EDEM3-206ENST00000474725 POGZQ7Z3K3 1410 aa29.9■■■□□ 2.38
EDEM3-206ENST00000474725 ZNF518AQ6AHZ1 1483 aa29.9■■■□□ 2.38
EDEM3-206ENST00000474725 ZFYVE16Q7Z3T8 1539 aa29.89■■■□□ 2.38
EDEM3-206ENST00000474725 DENND4BO75064 1496 aaPredicted RBP29.87■■■□□ 2.37
EDEM3-206ENST00000474725 TEX14Q8IWB6 1497 aa29.87■■■□□ 2.37
EDEM3-206ENST00000474725 INO80Q9ULG1 1556 aaPredicted RBP29.87■■■□□ 2.37
EDEM3-206ENST00000474725 ATP7AQ04656 1500 aa29.86■■■□□ 2.37
EDEM3-206ENST00000474725 CLSPNQ9HAW4 1339 aa29.85■■■□□ 2.37
EDEM3-206ENST00000474725 ACIN1Q9UKV3 1341 aaKnown RBP29.85■■■□□ 2.37
EDEM3-206ENST00000474725 MYT1LQ9UL68 1186 aa29.84■■■□□ 2.37
EDEM3-206ENST00000474725 RAPGEF3O95398 923 aa29.84■■■□□ 2.37
EDEM3-206ENST00000474725 DUOX2Q9NRD8 1548 aa29.83■■■□□ 2.37
EDEM3-206ENST00000474725 KDM5CP41229 1560 aa29.83■■■□□ 2.37
EDEM3-206ENST00000474725 KIDINS220Q9ULH0 1771 aa29.79■■■□□ 2.36
EDEM3-206ENST00000474725 RICTORQ6R327 1708 aa29.77■■■□□ 2.36
EDEM3-206ENST00000474725 MLH3Q9UHC1 1453 aa29.77■■■□□ 2.36
EDEM3-206ENST00000474725 MPHOSPH9Q99550 1183 aa29.76■■■□□ 2.35
EDEM3-206ENST00000474725 ERBINQ96RT1 1412 aa29.75■■■□□ 2.35
EDEM3-206ENST00000474725 HECW2Q9P2P5 1572 aa29.74■■■□□ 2.35
EDEM3-206ENST00000474725 FRMPD1Q5SYB0 1578 aa29.72■■■□□ 2.35
EDEM3-206ENST00000474725 TRHP20396 242 aaPredicted RBP29.71■■■□□ 2.35
EDEM3-206ENST00000474725 PZPP20742 1482 aa29.71■■■□□ 2.35
EDEM3-206ENST00000474725 NUP155O75694 1391 aa29.7■■■□□ 2.35
EDEM3-206ENST00000474725 SLC4A1APQ9BWU0 796 aaKnown RBP29.69■■■□□ 2.34
EDEM3-206ENST00000474725 DHX29Q7Z478 1369 aaKnown RBP29.68■■■□□ 2.34
EDEM3-206ENST00000474725 KDM5DQ9BY66 1539 aa29.66■■■□□ 2.34
EDEM3-206ENST00000474725 UNC13BO14795 1591 aa29.65■■■□□ 2.34
EDEM3-206ENST00000474725 COL17A1Q9UMD9 1497 aaPredicted RBP29.64■■■□□ 2.34
EDEM3-206ENST00000474725 ABCA6Q8N139 1617 aa29.64■■■□□ 2.34
EDEM3-206ENST00000474725 A2MP01023 1474 aa29.63■■■□□ 2.33
EDEM3-206ENST00000474725 SIN3AQ96ST3 1273 aa29.63■■■□□ 2.33
EDEM3-206ENST00000474725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms