RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 GPATCH8Q9UKJ3 1502 aaKnown RBP15.44■□□□□ 0.06
COL8A1-206ENST00000474648 CCNB3Q8WWL7 1395 aa15.44■□□□□ 0.06
COL8A1-206ENST00000474648 GLI2P10070 1586 aa15.44■□□□□ 0.06
COL8A1-206ENST00000474648 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
COL8A1-206ENST00000474648 PLCH2O75038 1416 aa15.42■□□□□ 0.06
COL8A1-206ENST00000474648 CD109Q6YHK3 1445 aa15.42■□□□□ 0.06
COL8A1-206ENST00000474648 DIP2BQ9P265 1576 aa15.41■□□□□ 0.06
COL8A1-206ENST00000474648 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
COL8A1-206ENST00000474648 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
COL8A1-206ENST00000474648 ABCA9Q8IUA7 1624 aa15.4■□□□□ 0.06
COL8A1-206ENST00000474648 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
COL8A1-206ENST00000474648 MYOM3Q5VTT5 1437 aa15.4■□□□□ 0.06
COL8A1-206ENST00000474648 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
COL8A1-206ENST00000474648 ZNF644Q9H582 1327 aaPredicted RBP15.38■□□□□ 0.05
COL8A1-206ENST00000474648 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
COL8A1-206ENST00000474648 MIA2Q96PC5 1412 aa15.36■□□□□ 0.05
COL8A1-206ENST00000474648 FGD6Q6ZV73 1430 aa15.35■□□□□ 0.05
COL8A1-206ENST00000474648 ZNF777Q9ULD5 760 aaPredicted RBP15.35■□□□□ 0.05
COL8A1-206ENST00000474648 MAP3K4Q9Y6R4 1608 aa15.34■□□□□ 0.05
COL8A1-206ENST00000474648 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
COL8A1-206ENST00000474648 ARAP3Q8WWN8 1544 aa15.33■□□□□ 0.05
COL8A1-206ENST00000474648 KIF13AQ9H1H9 1805 aa15.32■□□□□ 0.04
COL8A1-206ENST00000474648 CDC42BPAQ5VT25 1732 aa15.31■□□□□ 0.04
COL8A1-206ENST00000474648 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
COL8A1-206ENST00000474648 FANCAO15360 1455 aa15.3■□□□□ 0.04
COL8A1-206ENST00000474648 HNRNPMP52272 730 aaKnown RBP eCLIP15.3■□□□□ 0.04
COL8A1-206ENST00000474648 TCOF1Q13428 1488 aaKnown RBP15.3■□□□□ 0.04
COL8A1-206ENST00000474648 FAM50AQ14320 339 aaKnown RBP15.3■□□□□ 0.04
COL8A1-206ENST00000474648 PREX2Q70Z35 1606 aa15.3■□□□□ 0.04
COL8A1-206ENST00000474648 CDC42BPBQ9Y5S2 1711 aa15.3■□□□□ 0.04
COL8A1-206ENST00000474648 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
COL8A1-206ENST00000474648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL8A1-206ENST00000474648 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
COL8A1-206ENST00000474648 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.04
COL8A1-206ENST00000474648 NEO1Q92859 1461 aa15.27■□□□□ 0.04
COL8A1-206ENST00000474648 KIAA1107Q9UPP5 1409 aa15.27■□□□□ 0.04
COL8A1-206ENST00000474648 TRIM26Q12899 539 aaPredicted RBP15.27■□□□□ 0.04
COL8A1-206ENST00000474648 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.03
COL8A1-206ENST00000474648 MBD5Q9P267 1494 aa15.27■□□□□ 0.03
COL8A1-206ENST00000474648 PPRC1Q5VV67 1664 aaKnown RBP15.26■□□□□ 0.03
COL8A1-206ENST00000474648 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
COL8A1-206ENST00000474648 PTPN23Q9H3S7 1636 aa15.26■□□□□ 0.03
COL8A1-206ENST00000474648 SAMD9LQ8IVG5 1584 aa15.26■□□□□ 0.03
COL8A1-206ENST00000474648 TEX14Q8IWB6 1497 aa15.26■□□□□ 0.03
COL8A1-206ENST00000474648 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
COL8A1-206ENST00000474648 RSPH4AQ5TD94 716 aa15.24■□□□□ 0.03
COL8A1-206ENST00000474648 PLEKHH2Q8IVE3 1493 aa15.24■□□□□ 0.03
COL8A1-206ENST00000474648 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
COL8A1-206ENST00000474648 ABCC5O15440 1437 aa15.23■□□□□ 0.03
COL8A1-206ENST00000474648 TRAPPC8Q9Y2L5 1435 aa15.23■□□□□ 0.03
COL8A1-206ENST00000474648 ADGRL1O94910 1474 aa15.22■□□□□ 0.03
COL8A1-206ENST00000474648 COL17A1Q9UMD9 1497 aaPredicted RBP15.21■□□□□ 0.03
COL8A1-206ENST00000474648 TSPOAP1O95153 1857 aa15.21■□□□□ 0.03
COL8A1-206ENST00000474648 PTPRKQ15262 1439 aa15.21■□□□□ 0.03
COL8A1-206ENST00000474648 RAPGEF3O95398 923 aa15.21■□□□□ 0.03
COL8A1-206ENST00000474648 ABCC1P33527 1531 aa15.21■□□□□ 0.03
COL8A1-206ENST00000474648 ITGAEP38570 1179 aa15.2■□□□□ 0.02
COL8A1-206ENST00000474648 SYCP2Q9BX26 1530 aa15.19■□□□□ 0.02
COL8A1-206ENST00000474648 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
COL8A1-206ENST00000474648 DAPK1P53355 1430 aa15.18■□□□□ 0.02
COL8A1-206ENST00000474648 TSPY4P0CV99 314 aa15.18■□□□□ 0.02
COL8A1-206ENST00000474648 TSPY10P0CW01 314 aa15.18■□□□□ 0.02
COL8A1-206ENST00000474648 CFAP74Q9C0B2 1584 aa15.18■□□□□ 0.02
COL8A1-206ENST00000474648 ARHGEF5Q12774 1597 aa15.17■□□□□ 0.02
COL8A1-206ENST00000474648 CHIC2Q9UKJ5 165 aa15.17■□□□□ 0.02
COL8A1-206ENST00000474648 POGZQ7Z3K3 1410 aa15.17■□□□□ 0.02
COL8A1-206ENST00000474648 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
COL8A1-206ENST00000474648 SPAG9O60271 1321 aaKnown RBP15.15■□□□□ 0.02
COL8A1-206ENST00000474648 DNMT1P26358 1616 aaKnown RBP15.14■□□□□ 0.01
COL8A1-206ENST00000474648 PCGF6Q9BYE7 350 aa15.13■□□□□ 0.01
COL8A1-206ENST00000474648 ZNF518AQ6AHZ1 1483 aa15.13■□□□□ 0.01
COL8A1-206ENST00000474648 C9orf84Q5VXU9 1444 aa15.12■□□□□ 0.01
COL8A1-206ENST00000474648 RTEL1-TNFRSF6BF6WH68 1400 aa15.11■□□□□ 0.01
COL8A1-206ENST00000474648 ROCK1Q13464 1354 aa15.11■□□□□ 0.01
COL8A1-206ENST00000474648 NCOA1Q15788 1441 aa15.1■□□□□ 0.01
COL8A1-206ENST00000474648 MLH3Q9UHC1 1453 aa15.1■□□□□ 0.01
COL8A1-206ENST00000474648 SHANK2Q9UPX8 1470 aa15.1■□□□□ 0.01
COL8A1-206ENST00000474648 RRP7BPQ9NSQ0 103 aa15.1■□□□□ 0.01
COL8A1-206ENST00000474648 FRMPD1Q5SYB0 1578 aa15.1■□□□□ 0.01
COL8A1-206ENST00000474648 KDM5CP41229 1560 aa15.09■□□□□ 0.01
COL8A1-206ENST00000474648 ADGRL2O95490 1459 aa15.08■□□□□ 0.01
COL8A1-206ENST00000474648 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0
COL8A1-206ENST00000474648 MAST1Q9Y2H9 1570 aa15.07■□□□□ 0
COL8A1-206ENST00000474648 RICTORQ6R327 1708 aa15.07■□□□□ 0
COL8A1-206ENST00000474648 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
COL8A1-206ENST00000474648 MAGI2Q86UL8 1455 aa15.06■□□□□ 0
COL8A1-206ENST00000474648 YEATS2Q9ULM3 1422 aa15.05■□□□□ -0
COL8A1-206ENST00000474648 ZMYM4Q5VZL5 1548 aa15.05■□□□□ -0
COL8A1-206ENST00000474648 ZFYVE16Q7Z3T8 1539 aa15.05■□□□□ -0
COL8A1-206ENST00000474648 KDM6BO15054 1643 aa15.04■□□□□ -0
COL8A1-206ENST00000474648 NAIPQ13075 1403 aa15.04■□□□□ -0
COL8A1-206ENST00000474648 CROCC2H7BZ55 1655 aa15.03■□□□□ -0
COL8A1-206ENST00000474648 INO80Q9ULG1 1556 aaPredicted RBP15.03■□□□□ -0
COL8A1-206ENST00000474648 ATP7AQ04656 1500 aa15.03■□□□□ -0
COL8A1-206ENST00000474648 HFM1A2PYH4 1435 aa15.03■□□□□ -0
COL8A1-206ENST00000474648 KIF15Q9NS87 1388 aa15.03■□□□□ -0
COL8A1-206ENST00000474648 DHX29Q7Z478 1369 aaKnown RBP15.02■□□□□ -0
COL8A1-206ENST00000474648 KIDINS220Q9ULH0 1771 aa15.02□□□□□ -0.01
COL8A1-206ENST00000474648 SETD5Q9C0A6 1442 aa15.01□□□□□ -0.01
COL8A1-206ENST00000474648 HECW2Q9P2P5 1572 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms