RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 BCORL1Q5H9F3 1711 aa34.45■■■■□ 3.11
TRA2A-204ENST00000474586 PTPRMP28827 1452 aa34.42■■■■□ 3.1
TRA2A-204ENST00000474586 POGZQ7Z3K3 1410 aa34.42■■■■□ 3.1
TRA2A-204ENST00000474586 YEATS2Q9ULM3 1422 aa34.42■■■■□ 3.1
TRA2A-204ENST00000474586 ZFYVE16Q7Z3T8 1539 aa34.41■■■■□ 3.1
TRA2A-204ENST00000474586 CCDC18Q5T9S5 1454 aa34.4■■■■□ 3.1
TRA2A-204ENST00000474586 MAGI2Q86UL8 1455 aa34.39■■■■□ 3.1
TRA2A-204ENST00000474586 ARHGAP5Q13017 1502 aa34.37■■■■□ 3.09
TRA2A-204ENST00000474586 MADDQ8WXG6 1647 aa34.37■■■■□ 3.09
TRA2A-204ENST00000474586 FYCO1Q9BQS8 1478 aa34.34■■■■□ 3.09
TRA2A-204ENST00000474586 SIGLEC1Q9BZZ2 1709 aa34.31■■■■□ 3.08
TRA2A-204ENST00000474586 CDC42BPBQ9Y5S2 1711 aa34.29■■■■□ 3.08
TRA2A-204ENST00000474586 AFAP1Q8N556 730 aa34.27■■■■□ 3.08
TRA2A-204ENST00000474586 RIMS1Q86UR5 1692 aaKnown RBP34.25■■■■□ 3.07
TRA2A-204ENST00000474586 MLECQ14165 292 aa34.24■■■■□ 3.07
TRA2A-204ENST00000474586 ZNF518AQ6AHZ1 1483 aa34.24■■■■□ 3.07
TRA2A-204ENST00000474586 ATP10AO60312 1499 aa34.23■■■■□ 3.07
TRA2A-204ENST00000474586 PREX2Q70Z35 1606 aa34.22■■■■□ 3.07
TRA2A-204ENST00000474586 MYT1LQ9UL68 1186 aa34.18■■■■□ 3.06
TRA2A-204ENST00000474586 C9orf84Q5VXU9 1444 aa34.18■■■■□ 3.06
TRA2A-204ENST00000474586 KDM5CP41229 1560 aa34.18■■■■□ 3.06
TRA2A-204ENST00000474586 PLPPR3Q6T4P5 718 aa34.17■■■■□ 3.06
TRA2A-204ENST00000474586 CDC42BPAQ5VT25 1732 aa34.16■■■■□ 3.06
TRA2A-204ENST00000474586 ARHGEF12Q9NZN5 1544 aa34.14■■■■□ 3.06
TRA2A-204ENST00000474586 ABCC1P33527 1531 aa34.13■■■■□ 3.05
TRA2A-204ENST00000474586 TRAPPC8Q9Y2L5 1435 aa34.13■■■■□ 3.05
TRA2A-204ENST00000474586 ZNF777Q9ULD5 760 aaPredicted RBP34.09■■■■□ 3.05
TRA2A-204ENST00000474586 CEP162Q5TB80 1403 aa34.09■■■■□ 3.05
TRA2A-204ENST00000474586 ITSN2Q9NZM3 1697 aa34.09■■■■□ 3.05
TRA2A-204ENST00000474586 FER1L4A9Z1Z3 1794 aa34.08■■■■□ 3.05
TRA2A-204ENST00000474586 GPATCH8Q9UKJ3 1502 aaKnown RBP34.07■■■■□ 3.04
TRA2A-204ENST00000474586 MLH3Q9UHC1 1453 aa34.07■■■■□ 3.04
TRA2A-204ENST00000474586 DIP2CQ9Y2E4 1556 aa34.06■■■■□ 3.04
TRA2A-204ENST00000474586 LMTK3Q96Q04 1460 aa34.04■■■■□ 3.04
TRA2A-204ENST00000474586 MTUS2Q5JR59 1369 aa34.03■■■■□ 3.04
TRA2A-204ENST00000474586 ILDR1Q86SU0 546 aaPredicted RBP34.03■■■■□ 3.04
TRA2A-204ENST00000474586 ABCA6Q8N139 1617 aa34.02■■■■□ 3.04
TRA2A-204ENST00000474586 SAMD9LQ8IVG5 1584 aa34.01■■■■□ 3.03
TRA2A-204ENST00000474586 CCNB3Q8WWL7 1395 aa33.98■■■■□ 3.03
TRA2A-204ENST00000474586 REREQ9P2R6 1566 aa33.98■■■■□ 3.03
TRA2A-204ENST00000474586 CFDP1Q9UEE9 299 aaPredicted RBP33.97■■■■□ 3.03
TRA2A-204ENST00000474586 HNRNPMP52272 730 aaKnown RBP eCLIP33.96■■■■□ 3.03
TRA2A-204ENST00000474586 LOC105371045A0A1W2PR82 267 aa33.95■■■■□ 3.03
TRA2A-204ENST00000474586 KIDINS220Q9ULH0 1771 aa33.95■■■■□ 3.02
TRA2A-204ENST00000474586 SYCP2Q9BX26 1530 aa33.94■■■■□ 3.02
TRA2A-204ENST00000474586 CEBPAP49715 358 aaPredicted RBP33.93■■■■□ 3.02
TRA2A-204ENST00000474586 HSPA2P54652 639 aa33.93■■■■□ 3.02
TRA2A-204ENST00000474586 AGLP35573 1532 aa33.89■■■■□ 3.02
TRA2A-204ENST00000474586 EHBP1L1Q8N3D4 1523 aa33.89■■■■□ 3.02
TRA2A-204ENST00000474586 KIAA1107Q9UPP5 1409 aa33.88■■■■□ 3.01
TRA2A-204ENST00000474586 SPAG9O60271 1321 aaKnown RBP33.88■■■■□ 3.01
TRA2A-204ENST00000474586 PLEKHH2Q8IVE3 1493 aa33.87■■■■□ 3.01
TRA2A-204ENST00000474586 TIAM1Q13009 1591 aa33.84■■■■□ 3.01
TRA2A-204ENST00000474586 ZNF644Q9H582 1327 aaPredicted RBP33.82■■■■□ 3.01
TRA2A-204ENST00000474586 ESF1Q9H501 851 aaKnown RBP33.78■■■■□ 3
TRA2A-204ENST00000474586 ATP7AQ04656 1500 aa33.78■■■■□ 3
TRA2A-204ENST00000474586 PREX1Q8TCU6 1659 aa33.75■■■□□ 2.99
TRA2A-204ENST00000474586 INO80Q9ULG1 1556 aaPredicted RBP33.74■■■□□ 2.99
TRA2A-204ENST00000474586 VPS8Q8N3P4 1428 aa33.71■■■□□ 2.99
TRA2A-204ENST00000474586 C3P01024 1663 aa33.71■■■□□ 2.99
TRA2A-204ENST00000474586 NCOA2Q15596 1464 aa33.71■■■□□ 2.99
TRA2A-204ENST00000474586 SUPT6HQ7KZ85 1726 aaKnown RBP33.71■■■□□ 2.99
TRA2A-204ENST00000474586 MBD5Q9P267 1494 aa33.7■■■□□ 2.99
TRA2A-204ENST00000474586 A2MP01023 1474 aa33.68■■■□□ 2.98
TRA2A-204ENST00000474586 UHRF1BP1Q6BDS2 1440 aa33.66■■■□□ 2.98
TRA2A-204ENST00000474586 CNTLNQ9NXG0 1405 aa33.66■■■□□ 2.98
TRA2A-204ENST00000474586 SETD1BQ9UPS6 1966 aaKnown RBP33.66■■■□□ 2.98
TRA2A-204ENST00000474586 PLXNC1O60486 1568 aa33.64■■■□□ 2.98
TRA2A-204ENST00000474586 FBXO41Q8TF61 875 aa33.6■■■□□ 2.97
TRA2A-204ENST00000474586 LRRC9Q6ZRR7 1453 aa33.59■■■□□ 2.97
TRA2A-204ENST00000474586 ADGBQ8N7X0 1667 aa33.58■■■□□ 2.97
TRA2A-204ENST00000474586 CAMSAP2Q08AD1 1489 aa33.58■■■□□ 2.97
TRA2A-204ENST00000474586 GGT6Q6P531 493 aa33.58■■■□□ 2.97
TRA2A-204ENST00000474586 RTEL1-TNFRSF6BF6WH68 1400 aa33.57■■■□□ 2.96
TRA2A-204ENST00000474586 ZMYM3Q14202 1370 aa33.57■■■□□ 2.96
TRA2A-204ENST00000474586 MROH2AA6NES4 1674 aa33.55■■■□□ 2.96
TRA2A-204ENST00000474586 KANK4Q5T7N3 995 aaPredicted RBP33.54■■■□□ 2.96
TRA2A-204ENST00000474586 CCDC141Q6ZP82 1450 aa33.53■■■□□ 2.96
TRA2A-204ENST00000474586 CLTCQ00610 1675 aaKnown RBP33.52■■■□□ 2.96
TRA2A-204ENST00000474586 RSPH4AQ5TD94 716 aa33.51■■■□□ 2.95
TRA2A-204ENST00000474586 STRCQ7RTU9 1775 aa33.51■■■□□ 2.95
TRA2A-204ENST00000474586 DHX29Q7Z478 1369 aaKnown RBP33.49■■■□□ 2.95
TRA2A-204ENST00000474586 MAP3K1Q13233 1512 aa33.49■■■□□ 2.95
TRA2A-204ENST00000474586 NPATQ14207 1427 aa33.47■■■□□ 2.95
TRA2A-204ENST00000474586 DMRT2Q9Y5R5 561 aa33.46■■■□□ 2.95
TRA2A-204ENST00000474586 PPP6R1Q9UPN7 881 aa33.45■■■□□ 2.95
TRA2A-204ENST00000474586 ARHGEF5Q12774 1597 aa33.43■■■□□ 2.94
TRA2A-204ENST00000474586 KIF3BO15066 747 aa33.41■■■□□ 2.94
TRA2A-204ENST00000474586 TSPY4P0CV99 314 aa33.41■■■□□ 2.94
TRA2A-204ENST00000474586 TSPY10P0CW01 314 aa33.41■■■□□ 2.94
TRA2A-204ENST00000474586 CERKQ8TCT0 537 aa33.41■■■□□ 2.94
TRA2A-204ENST00000474586 PTPRKQ15262 1439 aa33.39■■■□□ 2.94
TRA2A-204ENST00000474586 MYOM3Q5VTT5 1437 aa33.36■■■□□ 2.93
TRA2A-204ENST00000474586 APLP2Q06481 763 aa33.33■■■□□ 2.93
TRA2A-204ENST00000474586 PTPRTO14522 1441 aa33.33■■■□□ 2.93
TRA2A-204ENST00000474586 NCOA1Q15788 1441 aa33.33■■■□□ 2.93
TRA2A-204ENST00000474586 MIA2Q96PC5 1412 aa33.32■■■□□ 2.92
TRA2A-204ENST00000474586 CAMSAP1Q5T5Y3 1602 aa33.31■■■□□ 2.92
TRA2A-204ENST00000474586 MYO3AQ8NEV4 1616 aa33.3■■■□□ 2.92
TRA2A-204ENST00000474586 MAST1Q9Y2H9 1570 aa33.26■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms