RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 KDM4FA0A1W2PPD8 638 aa28.89■■■□□ 2.22
EFNA1-204ENST00000474413 ARHGAP5Q13017 1502 aa28.89■■■□□ 2.21
EFNA1-204ENST00000474413 ARHGEF40Q8TER5 1519 aa28.88■■■□□ 2.21
EFNA1-204ENST00000474413 POGZQ7Z3K3 1410 aa28.86■■■□□ 2.21
EFNA1-204ENST00000474413 EHBP1L1Q8N3D4 1523 aa28.85■■■□□ 2.21
EFNA1-204ENST00000474413 TIAM1Q13009 1591 aa28.84■■■□□ 2.21
EFNA1-204ENST00000474413 SCAPERQ9BY12 1400 aa28.83■■■□□ 2.21
EFNA1-204ENST00000474413 ABCC1P33527 1531 aa28.82■■■□□ 2.2
EFNA1-204ENST00000474413 GPATCH8Q9UKJ3 1502 aaKnown RBP28.8■■■□□ 2.2
EFNA1-204ENST00000474413 SIGLEC1Q9BZZ2 1709 aa28.8■■■□□ 2.2
EFNA1-204ENST00000474413 ARHGEF12Q9NZN5 1544 aa28.79■■■□□ 2.2
EFNA1-204ENST00000474413 MTUS2Q5JR59 1369 aa28.78■■■□□ 2.2
EFNA1-204ENST00000474413 EFCAB2Q5VUJ9 269 aa28.78■■■□□ 2.2
EFNA1-204ENST00000474413 KDM5CP41229 1560 aa28.78■■■□□ 2.2
EFNA1-204ENST00000474413 SAMD9LQ8IVG5 1584 aa28.78■■■□□ 2.2
EFNA1-204ENST00000474413 ITSN2Q9NZM3 1697 aa28.77■■■□□ 2.2
EFNA1-204ENST00000474413 YEATS2Q9ULM3 1422 aa28.77■■■□□ 2.2
EFNA1-204ENST00000474413 ZFYVE16Q7Z3T8 1539 aa28.74■■■□□ 2.19
EFNA1-204ENST00000474413 ZNF518AQ6AHZ1 1483 aa28.71■■■□□ 2.19
EFNA1-204ENST00000474413 MAGI2Q86UL8 1455 aa28.7■■■□□ 2.18
EFNA1-204ENST00000474413 MAP3K1Q13233 1512 aa28.69■■■□□ 2.18
EFNA1-204ENST00000474413 TRAPPC8Q9Y2L5 1435 aa28.69■■■□□ 2.18
EFNA1-204ENST00000474413 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
EFNA1-204ENST00000474413 LRRC9Q6ZRR7 1453 aa28.67■■■□□ 2.18
EFNA1-204ENST00000474413 SUPT6HQ7KZ85 1726 aaKnown RBP28.67■■■□□ 2.18
EFNA1-204ENST00000474413 SYCP2Q9BX26 1530 aa28.67■■■□□ 2.18
EFNA1-204ENST00000474413 HECW2Q9P2P5 1572 aa28.67■■■□□ 2.18
EFNA1-204ENST00000474413 NCOA2Q15596 1464 aa28.66■■■□□ 2.18
EFNA1-204ENST00000474413 CCNB3Q8WWL7 1395 aa28.65■■■□□ 2.18
EFNA1-204ENST00000474413 ADAMTSL3P82987 1691 aa28.65■■■□□ 2.18
EFNA1-204ENST00000474413 BCORL1Q5H9F3 1711 aa28.65■■■□□ 2.18
EFNA1-204ENST00000474413 ABCA6Q8N139 1617 aa28.63■■■□□ 2.17
EFNA1-204ENST00000474413 DIP2CQ9Y2E4 1556 aa28.62■■■□□ 2.17
EFNA1-204ENST00000474413 AFAP1Q8N556 730 aa28.62■■■□□ 2.17
EFNA1-204ENST00000474413 MLH3Q9UHC1 1453 aa28.59■■■□□ 2.17
EFNA1-204ENST00000474413 KIDINS220Q9ULH0 1771 aa28.58■■■□□ 2.17
EFNA1-204ENST00000474413 KANK4Q5T7N3 995 aaPredicted RBP28.57■■■□□ 2.16
EFNA1-204ENST00000474413 MADDQ8WXG6 1647 aa28.56■■■□□ 2.16
EFNA1-204ENST00000474413 KIAA1107Q9UPP5 1409 aa28.55■■■□□ 2.16
EFNA1-204ENST00000474413 ATP10AO60312 1499 aa28.54■■■□□ 2.16
EFNA1-204ENST00000474413 CFDP1Q9UEE9 299 aaPredicted RBP28.54■■■□□ 2.16
EFNA1-204ENST00000474413 INO80Q9ULG1 1556 aaPredicted RBP28.54■■■□□ 2.16
EFNA1-204ENST00000474413 C9orf84Q5VXU9 1444 aa28.53■■■□□ 2.16
EFNA1-204ENST00000474413 ZNF644Q9H582 1327 aaPredicted RBP28.53■■■□□ 2.16
EFNA1-204ENST00000474413 ZNF777Q9ULD5 760 aaPredicted RBP28.53■■■□□ 2.16
EFNA1-204ENST00000474413 REREQ9P2R6 1566 aa28.53■■■□□ 2.16
EFNA1-204ENST00000474413 PLEKHH2Q8IVE3 1493 aa28.53■■■□□ 2.16
EFNA1-204ENST00000474413 MBD5Q9P267 1494 aa28.52■■■□□ 2.16
EFNA1-204ENST00000474413 CAMSAP2Q08AD1 1489 aa28.48■■■□□ 2.15
EFNA1-204ENST00000474413 HNRNPMP52272 730 aaKnown RBP eCLIP28.47■■■□□ 2.15
EFNA1-204ENST00000474413 ATP7AQ04656 1500 aa28.45■■■□□ 2.15
EFNA1-204ENST00000474413 RIMS1Q86UR5 1692 aaKnown RBP28.45■■■□□ 2.14
EFNA1-204ENST00000474413 PTPRMP28827 1452 aa28.44■■■□□ 2.14
EFNA1-204ENST00000474413 ARID4BQ4LE39 1312 aaPredicted RBP28.43■■■□□ 2.14
EFNA1-204ENST00000474413 PLXNC1O60486 1568 aa28.4■■■□□ 2.14
EFNA1-204ENST00000474413 FER1L4A9Z1Z3 1794 aa28.39■■■□□ 2.14
EFNA1-204ENST00000474413 AGLP35573 1532 aa28.39■■■□□ 2.14
EFNA1-204ENST00000474413 MYOM3Q5VTT5 1437 aa28.39■■■□□ 2.14
EFNA1-204ENST00000474413 ARHGEF5Q12774 1597 aa28.37■■■□□ 2.13
EFNA1-204ENST00000474413 SPAG9O60271 1321 aaKnown RBP28.36■■■□□ 2.13
EFNA1-204ENST00000474413 CCDC141Q6ZP82 1450 aa28.35■■■□□ 2.13
EFNA1-204ENST00000474413 ADGBQ8N7X0 1667 aa28.33■■■□□ 2.13
EFNA1-204ENST00000474413 MIA2Q96PC5 1412 aa28.32■■■□□ 2.12
EFNA1-204ENST00000474413 MLECQ14165 292 aa28.29■■■□□ 2.12
EFNA1-204ENST00000474413 MYT1LQ9UL68 1186 aa28.29■■■□□ 2.12
EFNA1-204ENST00000474413 RTEL1-TNFRSF6BF6WH68 1400 aa28.27■■■□□ 2.12
EFNA1-204ENST00000474413 A2MP01023 1474 aa28.27■■■□□ 2.12
EFNA1-204ENST00000474413 PTPN23Q9H3S7 1636 aa28.25■■■□□ 2.11
EFNA1-204ENST00000474413 MAST1Q9Y2H9 1570 aa28.24■■■□□ 2.11
EFNA1-204ENST00000474413 FGD6Q6ZV73 1430 aa28.23■■■□□ 2.11
EFNA1-204ENST00000474413 TCOF1Q13428 1488 aaKnown RBP28.22■■■□□ 2.11
EFNA1-204ENST00000474413 APLP2Q06481 763 aa28.22■■■□□ 2.11
EFNA1-204ENST00000474413 CROCC2H7BZ55 1655 aa28.22■■■□□ 2.11
EFNA1-204ENST00000474413 C3P01024 1663 aa28.16■■■□□ 2.1
EFNA1-204ENST00000474413 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
EFNA1-204ENST00000474413 DNMT1P26358 1616 aaKnown RBP28.14■■■□□ 2.1
EFNA1-204ENST00000474413 ABCC5O15440 1437 aa28.12■■■□□ 2.09
EFNA1-204ENST00000474413 RSPH4AQ5TD94 716 aa28.12■■■□□ 2.09
EFNA1-204ENST00000474413 DHX29Q7Z478 1369 aaKnown RBP28.11■■■□□ 2.09
EFNA1-204ENST00000474413 MROH2AA6NES4 1674 aa28.11■■■□□ 2.09
EFNA1-204ENST00000474413 SHANK2Q9UPX8 1470 aa28.11■■■□□ 2.09
EFNA1-204ENST00000474413 CLTCQ00610 1675 aaKnown RBP28.09■■■□□ 2.09
EFNA1-204ENST00000474413 DAPK1P53355 1430 aa28.08■■■□□ 2.09
EFNA1-204ENST00000474413 CEBPAP49715 358 aaPredicted RBP28.06■■■□□ 2.08
EFNA1-204ENST00000474413 CNTLNQ9NXG0 1405 aa28.04■■■□□ 2.08
EFNA1-204ENST00000474413 PLPPR3Q6T4P5 718 aa28.04■■■□□ 2.08
EFNA1-204ENST00000474413 PREX1Q8TCU6 1659 aa28.03■■■□□ 2.08
EFNA1-204ENST00000474413 RNF17Q9BXT8 1623 aaKnown RBP28.03■■■□□ 2.08
EFNA1-204ENST00000474413 MROH1Q8NDA8 1641 aa28.02■■■□□ 2.08
EFNA1-204ENST00000474413 EIF2AK4Q9P2K8 1649 aaKnown RBP28.01■■■□□ 2.07
EFNA1-204ENST00000474413 TSPY4P0CV99 314 aa28■■■□□ 2.07
EFNA1-204ENST00000474413 TSPY10P0CW01 314 aa28■■■□□ 2.07
EFNA1-204ENST00000474413 DUOX2Q9NRD8 1548 aa27.97■■■□□ 2.07
EFNA1-204ENST00000474413 GGT6Q6P531 493 aa27.95■■■□□ 2.06
EFNA1-204ENST00000474413 KDM5DQ9BY66 1539 aa27.95■■■□□ 2.06
EFNA1-204ENST00000474413 FAM135AQ9P2D6 1515 aa27.95■■■□□ 2.06
EFNA1-204ENST00000474413 PPARGC1BQ86YN6 1023 aaKnown RBP27.94■■■□□ 2.06
EFNA1-204ENST00000474413 KIF3BO15066 747 aa27.93■■■□□ 2.06
EFNA1-204ENST00000474413 ZMYM3Q14202 1370 aa27.93■■■□□ 2.06
EFNA1-204ENST00000474413 KIF15Q9NS87 1388 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms