RNA–Protein interactions for RNA: ENST00000474380.1

LAMB1-210, Transcript of laminin subunit beta 1, humanhuman

TSL 5

Gene LAMB1, Length 945 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-210ENST00000474380 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
LAMB1-210ENST00000474380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.32□□□□□ -0.12
LAMB1-210ENST00000474380 ITSN2Q9NZM3 1697 aa14.32□□□□□ -0.12
LAMB1-210ENST00000474380 KIF13AQ9H1H9 1805 aa14.31□□□□□ -0.12
LAMB1-210ENST00000474380 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
LAMB1-210ENST00000474380 ZNF644Q9H582 1327 aaPredicted RBP14.29□□□□□ -0.12
LAMB1-210ENST00000474380 CDC42BPAQ5VT25 1732 aa14.29□□□□□ -0.12
LAMB1-210ENST00000474380 PLCH2O75038 1416 aa14.28□□□□□ -0.12
LAMB1-210ENST00000474380 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
LAMB1-210ENST00000474380 TTC37Q6PGP7 1564 aa14.27□□□□□ -0.12
LAMB1-210ENST00000474380 ARHGAP5Q13017 1502 aa14.25□□□□□ -0.13
LAMB1-210ENST00000474380 MYO5CQ9NQX4 1742 aa14.25□□□□□ -0.13
LAMB1-210ENST00000474380 PREX2Q70Z35 1606 aa14.25□□□□□ -0.13
LAMB1-210ENST00000474380 CAMSAP2Q08AD1 1489 aa14.25□□□□□ -0.13
LAMB1-210ENST00000474380 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
LAMB1-210ENST00000474380 ABCA9Q8IUA7 1624 aa14.24□□□□□ -0.13
LAMB1-210ENST00000474380 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
LAMB1-210ENST00000474380 GLI2P10070 1586 aa14.24□□□□□ -0.13
LAMB1-210ENST00000474380 TSPOAP1O95153 1857 aa14.23□□□□□ -0.13
LAMB1-210ENST00000474380 TEX14Q8IWB6 1497 aa14.23□□□□□ -0.13
LAMB1-210ENST00000474380 HNRNPMP52272 730 aaKnown RBP eCLIP14.22□□□□□ -0.13
LAMB1-210ENST00000474380 CD109Q6YHK3 1445 aa14.22□□□□□ -0.13
LAMB1-210ENST00000474380 KDM6BO15054 1643 aa14.22□□□□□ -0.13
LAMB1-210ENST00000474380 TSPY4P0CV99 314 aa14.21□□□□□ -0.13
LAMB1-210ENST00000474380 TSPY10P0CW01 314 aa14.21□□□□□ -0.13
LAMB1-210ENST00000474380 CHIC2Q9UKJ5 165 aa14.21□□□□□ -0.13
LAMB1-210ENST00000474380 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
LAMB1-210ENST00000474380 PLEKHH2Q8IVE3 1493 aa14.2□□□□□ -0.14
LAMB1-210ENST00000474380 ABCC5O15440 1437 aa14.2□□□□□ -0.14
LAMB1-210ENST00000474380 DAPK1P53355 1430 aa14.2□□□□□ -0.14
LAMB1-210ENST00000474380 PTPRKQ15262 1439 aa14.2□□□□□ -0.14
LAMB1-210ENST00000474380 SAMD9LQ8IVG5 1584 aa14.18□□□□□ -0.14
LAMB1-210ENST00000474380 SETD5Q9C0A6 1442 aa14.18□□□□□ -0.14
LAMB1-210ENST00000474380 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
LAMB1-210ENST00000474380 DNMT1P26358 1616 aaKnown RBP14.18□□□□□ -0.14
LAMB1-210ENST00000474380 FANCAO15360 1455 aa14.17□□□□□ -0.14
LAMB1-210ENST00000474380 HRCP23327 699 aa14.16□□□□□ -0.14
LAMB1-210ENST00000474380 RRP7BPQ9NSQ0 103 aa14.16□□□□□ -0.14
LAMB1-210ENST00000474380 MBD5Q9P267 1494 aa14.16□□□□□ -0.14
LAMB1-210ENST00000474380 AKNAQ7Z591 1439 aa14.15□□□□□ -0.14
LAMB1-210ENST00000474380 ARHGEF5Q12774 1597 aa14.14□□□□□ -0.15
LAMB1-210ENST00000474380 ROCK1Q13464 1354 aa14.14□□□□□ -0.15
LAMB1-210ENST00000474380 CCER1Q8TC90 406 aaPredicted RBP14.13□□□□□ -0.15
LAMB1-210ENST00000474380 CCDC141Q6ZP82 1450 aa14.12□□□□□ -0.15
LAMB1-210ENST00000474380 MAP3K4Q9Y6R4 1608 aa14.12□□□□□ -0.15
LAMB1-210ENST00000474380 ANKRD30AQ9BXX3 1397 aa14.12□□□□□ -0.15
LAMB1-210ENST00000474380 RAB3GAP2Q9H2M9 1393 aa14.12□□□□□ -0.15
LAMB1-210ENST00000474380 SYCP2Q9BX26 1530 aa14.12□□□□□ -0.15
LAMB1-210ENST00000474380 HFM1A2PYH4 1435 aa14.12□□□□□ -0.15
LAMB1-210ENST00000474380 CFAP74Q9C0B2 1584 aa14.12□□□□□ -0.15
LAMB1-210ENST00000474380 ARHGEF12Q9NZN5 1544 aa14.11□□□□□ -0.15
LAMB1-210ENST00000474380 SCAPERQ9BY12 1400 aa14.11□□□□□ -0.15
LAMB1-210ENST00000474380 ADGRL1O94910 1474 aa14.11□□□□□ -0.15
LAMB1-210ENST00000474380 ABCC1P33527 1531 aa14.1□□□□□ -0.15
LAMB1-210ENST00000474380 NAIPQ13075 1403 aa14.1□□□□□ -0.15
LAMB1-210ENST00000474380 C9orf84Q5VXU9 1444 aa14.1□□□□□ -0.15
LAMB1-210ENST00000474380 NEO1Q92859 1461 aa14.1□□□□□ -0.15
LAMB1-210ENST00000474380 SHANK2Q9UPX8 1470 aa14.1□□□□□ -0.15
LAMB1-210ENST00000474380 NCOA1Q15788 1441 aa14.09□□□□□ -0.15
LAMB1-210ENST00000474380 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
LAMB1-210ENST00000474380 CROCC2H7BZ55 1655 aa14.09□□□□□ -0.15
LAMB1-210ENST00000474380 ACIN1Q9UKV3 1341 aaKnown RBP14.09□□□□□ -0.15
LAMB1-210ENST00000474380 TRAPPC8Q9Y2L5 1435 aa14.08□□□□□ -0.15
LAMB1-210ENST00000474380 ADGRL2O95490 1459 aa14.08□□□□□ -0.16
LAMB1-210ENST00000474380 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
LAMB1-210ENST00000474380 SPAG9O60271 1321 aaKnown RBP14.08□□□□□ -0.16
LAMB1-210ENST00000474380 ADGBQ8N7X0 1667 aa14.07□□□□□ -0.16
LAMB1-210ENST00000474380 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
LAMB1-210ENST00000474380 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
LAMB1-210ENST00000474380 PPRC1Q5VV67 1664 aaKnown RBP14.06□□□□□ -0.16
LAMB1-210ENST00000474380 MAST1Q9Y2H9 1570 aa14.05□□□□□ -0.16
LAMB1-210ENST00000474380 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
LAMB1-210ENST00000474380 TRIM52Q96A61 297 aa14.04□□□□□ -0.16
LAMB1-210ENST00000474380 RTEL1-TNFRSF6BF6WH68 1400 aa14.04□□□□□ -0.16
LAMB1-210ENST00000474380 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
LAMB1-210ENST00000474380 DENND4BO75064 1496 aaPredicted RBP14.02□□□□□ -0.16
LAMB1-210ENST00000474380 ZNF518AQ6AHZ1 1483 aa14.02□□□□□ -0.16
LAMB1-210ENST00000474380 RAPGEF3O95398 923 aa14.02□□□□□ -0.17
LAMB1-210ENST00000474380 ZEB1P37275 1124 aaPredicted RBP14.02□□□□□ -0.17
LAMB1-210ENST00000474380 PIAS4Q8N2W9 510 aaPredicted RBP14.02□□□□□ -0.17
LAMB1-210ENST00000474380 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
LAMB1-210ENST00000474380 ADRA2BP18089 450 aa14.01□□□□□ -0.17
LAMB1-210ENST00000474380 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
LAMB1-210ENST00000474380 ANKRD50Q9ULJ7 1429 aa14□□□□□ -0.17
LAMB1-210ENST00000474380 DHX57Q6P158 1386 aaKnown RBP14□□□□□ -0.17
LAMB1-210ENST00000474380 ARID4BQ4LE39 1312 aaPredicted RBP13.98□□□□□ -0.17
LAMB1-210ENST00000474380 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
LAMB1-210ENST00000474380 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
LAMB1-210ENST00000474380 ATP7AQ04656 1500 aa13.97□□□□□ -0.17
LAMB1-210ENST00000474380 DUOX2Q9NRD8 1548 aa13.97□□□□□ -0.17
LAMB1-210ENST00000474380 MSH5O43196 834 aa13.97□□□□□ -0.17
LAMB1-210ENST00000474380 MLH3Q9UHC1 1453 aa13.96□□□□□ -0.17
LAMB1-210ENST00000474380 ZFYVE16Q7Z3T8 1539 aa13.95□□□□□ -0.18
LAMB1-210ENST00000474380 MPHOSPH9Q99550 1183 aa13.95□□□□□ -0.18
LAMB1-210ENST00000474380 KDM5CP41229 1560 aa13.95□□□□□ -0.18
LAMB1-210ENST00000474380 INO80Q9ULG1 1556 aaPredicted RBP13.95□□□□□ -0.18
LAMB1-210ENST00000474380 DHX29Q7Z478 1369 aaKnown RBP13.94□□□□□ -0.18
LAMB1-210ENST00000474380 ERBINQ96RT1 1412 aa13.93□□□□□ -0.18
LAMB1-210ENST00000474380 RICTORQ6R327 1708 aa13.93□□□□□ -0.18
LAMB1-210ENST00000474380 HECW2Q9P2P5 1572 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms