RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
CASC3-204ENST00000474190 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
CASC3-204ENST00000474190 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
CASC3-204ENST00000474190 MYOM3Q5VTT5 1437 aa16.16■□□□□ 0.18
CASC3-204ENST00000474190 ARHGEF12Q9NZN5 1544 aa16.15■□□□□ 0.18
CASC3-204ENST00000474190 FANCAO15360 1455 aa16.15■□□□□ 0.18
CASC3-204ENST00000474190 PREX2Q70Z35 1606 aa16.14■□□□□ 0.17
CASC3-204ENST00000474190 NEO1Q92859 1461 aa16.14■□□□□ 0.17
CASC3-204ENST00000474190 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
CASC3-204ENST00000474190 AKNAQ7Z591 1439 aa16.13■□□□□ 0.17
CASC3-204ENST00000474190 CDC42BPBQ9Y5S2 1711 aa16.13■□□□□ 0.17
CASC3-204ENST00000474190 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
CASC3-204ENST00000474190 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
CASC3-204ENST00000474190 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
CASC3-204ENST00000474190 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
CASC3-204ENST00000474190 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
CASC3-204ENST00000474190 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
CASC3-204ENST00000474190 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
CASC3-204ENST00000474190 SAMD9LQ8IVG5 1584 aa16.1■□□□□ 0.17
CASC3-204ENST00000474190 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
CASC3-204ENST00000474190 KIAA1107Q9UPP5 1409 aa16.09■□□□□ 0.17
CASC3-204ENST00000474190 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.17
CASC3-204ENST00000474190 TRAPPC8Q9Y2L5 1435 aa16.08■□□□□ 0.16
CASC3-204ENST00000474190 ABCC1P33527 1531 aa16.08■□□□□ 0.16
CASC3-204ENST00000474190 SCAPERQ9BY12 1400 aa16.07■□□□□ 0.16
CASC3-204ENST00000474190 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
CASC3-204ENST00000474190 FRMPD1Q5SYB0 1578 aa16.06■□□□□ 0.16
CASC3-204ENST00000474190 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
CASC3-204ENST00000474190 RAPGEF3O95398 923 aa16.06■□□□□ 0.16
CASC3-204ENST00000474190 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.16
CASC3-204ENST00000474190 ZNF777Q9ULD5 760 aaPredicted RBP16.05■□□□□ 0.16
CASC3-204ENST00000474190 POGZQ7Z3K3 1410 aa16.04■□□□□ 0.16
CASC3-204ENST00000474190 AFAP1Q8N556 730 aa16.04■□□□□ 0.16
CASC3-204ENST00000474190 SYCP2Q9BX26 1530 aa16.03■□□□□ 0.16
CASC3-204ENST00000474190 ITSN2Q9NZM3 1697 aa16.02■□□□□ 0.16
CASC3-204ENST00000474190 DENND4BO75064 1496 aaPredicted RBP16.02■□□□□ 0.15
CASC3-204ENST00000474190 PTPRKQ15262 1439 aa16.02■□□□□ 0.15
CASC3-204ENST00000474190 ABCC5O15440 1437 aa16.01■□□□□ 0.15
CASC3-204ENST00000474190 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
CASC3-204ENST00000474190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
CASC3-204ENST00000474190 PLEKHH2Q8IVE3 1493 aa16■□□□□ 0.15
CASC3-204ENST00000474190 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
CASC3-204ENST00000474190 KDM5CP41229 1560 aa15.99■□□□□ 0.15
CASC3-204ENST00000474190 RICTORQ6R327 1708 aa15.97■□□□□ 0.15
CASC3-204ENST00000474190 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
CASC3-204ENST00000474190 ZNF518AQ6AHZ1 1483 aa15.96■□□□□ 0.14
CASC3-204ENST00000474190 YEATS2Q9ULM3 1422 aa15.95■□□□□ 0.14
CASC3-204ENST00000474190 ZMYM4Q5VZL5 1548 aa15.95■□□□□ 0.14
CASC3-204ENST00000474190 CCDC141Q6ZP82 1450 aa15.95■□□□□ 0.14
CASC3-204ENST00000474190 MLH3Q9UHC1 1453 aa15.95■□□□□ 0.14
CASC3-204ENST00000474190 DAPK1P53355 1430 aa15.94■□□□□ 0.14
CASC3-204ENST00000474190 FAM50AQ14320 339 aaKnown RBP15.93■□□□□ 0.14
CASC3-204ENST00000474190 RSPH4AQ5TD94 716 aa15.92■□□□□ 0.14
CASC3-204ENST00000474190 ZFYVE16Q7Z3T8 1539 aa15.91■□□□□ 0.14
CASC3-204ENST00000474190 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
CASC3-204ENST00000474190 DNMT1P26358 1616 aaKnown RBP15.9■□□□□ 0.14
CASC3-204ENST00000474190 SPAG9O60271 1321 aaKnown RBP15.9■□□□□ 0.14
CASC3-204ENST00000474190 SHANK2Q9UPX8 1470 aa15.9■□□□□ 0.14
CASC3-204ENST00000474190 INO80Q9ULG1 1556 aaPredicted RBP15.89■□□□□ 0.13
CASC3-204ENST00000474190 C9orf84Q5VXU9 1444 aa15.89■□□□□ 0.13
CASC3-204ENST00000474190 FBXO41Q8TF61 875 aa15.89■□□□□ 0.13
CASC3-204ENST00000474190 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
CASC3-204ENST00000474190 MAST1Q9Y2H9 1570 aa15.88■□□□□ 0.13
CASC3-204ENST00000474190 KIDINS220Q9ULH0 1771 aa15.87■□□□□ 0.13
CASC3-204ENST00000474190 ADGRL2O95490 1459 aa15.87■□□□□ 0.13
CASC3-204ENST00000474190 NCOA1Q15788 1441 aa15.86■□□□□ 0.13
CASC3-204ENST00000474190 ATP7AQ04656 1500 aa15.86■□□□□ 0.13
CASC3-204ENST00000474190 DIP2CQ9Y2E4 1556 aa15.85■□□□□ 0.13
CASC3-204ENST00000474190 CHIC2Q9UKJ5 165 aa15.85■□□□□ 0.13
CASC3-204ENST00000474190 ARHGEF40Q8TER5 1519 aa15.84■□□□□ 0.13
CASC3-204ENST00000474190 ABCA6Q8N139 1617 aa15.84■□□□□ 0.13
CASC3-204ENST00000474190 SIGLEC1Q9BZZ2 1709 aa15.83■□□□□ 0.13
CASC3-204ENST00000474190 TSPY4P0CV99 314 aa15.83■□□□□ 0.12
CASC3-204ENST00000474190 TSPY10P0CW01 314 aa15.83■□□□□ 0.12
CASC3-204ENST00000474190 ROCK1Q13464 1354 aa15.83■□□□□ 0.12
CASC3-204ENST00000474190 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.12
CASC3-204ENST00000474190 ATP10AO60312 1499 aa15.82■□□□□ 0.12
CASC3-204ENST00000474190 ITGAEP38570 1179 aa15.81■□□□□ 0.12
CASC3-204ENST00000474190 PLXNC1O60486 1568 aa15.8■□□□□ 0.12
CASC3-204ENST00000474190 DHX29Q7Z478 1369 aaKnown RBP15.8■□□□□ 0.12
CASC3-204ENST00000474190 KIF15Q9NS87 1388 aa15.8■□□□□ 0.12
CASC3-204ENST00000474190 RRP7BPQ9NSQ0 103 aa15.8■□□□□ 0.12
CASC3-204ENST00000474190 REREQ9P2R6 1566 aa15.79■□□□□ 0.12
CASC3-204ENST00000474190 A2MP01023 1474 aa15.78■□□□□ 0.12
CASC3-204ENST00000474190 NAIPQ13075 1403 aa15.77■□□□□ 0.12
CASC3-204ENST00000474190 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
CASC3-204ENST00000474190 AGLP35573 1532 aa15.76■□□□□ 0.11
CASC3-204ENST00000474190 HFM1A2PYH4 1435 aa15.76■□□□□ 0.11
CASC3-204ENST00000474190 TRIM26Q12899 539 aaPredicted RBP15.74■□□□□ 0.11
CASC3-204ENST00000474190 DUOX2Q9NRD8 1548 aa15.73■□□□□ 0.11
CASC3-204ENST00000474190 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
CASC3-204ENST00000474190 ADAMTSL3P82987 1691 aa15.73■□□□□ 0.11
CASC3-204ENST00000474190 ERBINQ96RT1 1412 aa15.72■□□□□ 0.11
CASC3-204ENST00000474190 PTPRMP28827 1452 aa15.71■□□□□ 0.11
CASC3-204ENST00000474190 ANKRD50Q9ULJ7 1429 aa15.71■□□□□ 0.11
CASC3-204ENST00000474190 MYT1LQ9UL68 1186 aa15.71■□□□□ 0.11
CASC3-204ENST00000474190 LMTK3Q96Q04 1460 aa15.7■□□□□ 0.1
CASC3-204ENST00000474190 MROH1Q8NDA8 1641 aa15.69■□□□□ 0.1
CASC3-204ENST00000474190 KIF3BO15066 747 aa15.67■□□□□ 0.1
CASC3-204ENST00000474190 BCORL1Q5H9F3 1711 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms