RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 AKNAQ7Z591 1439 aa19.41■□□□□ 0.7
DDX56-209ENST00000473924 COL17A1Q9UMD9 1497 aaPredicted RBP19.4■□□□□ 0.7
DDX56-209ENST00000473924 PREX2Q70Z35 1606 aa19.4■□□□□ 0.7
DDX56-209ENST00000473924 CDC42BPAQ5VT25 1732 aa19.39■□□□□ 0.69
DDX56-209ENST00000473924 CDC42BPBQ9Y5S2 1711 aa19.38■□□□□ 0.69
DDX56-209ENST00000473924 GPATCH8Q9UKJ3 1502 aaKnown RBP19.37■□□□□ 0.69
DDX56-209ENST00000473924 NCOA2Q15596 1464 aa19.37■□□□□ 0.69
DDX56-209ENST00000473924 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
DDX56-209ENST00000473924 ADGRL1O94910 1474 aa19.35■□□□□ 0.69
DDX56-209ENST00000473924 ZNF777Q9ULD5 760 aaPredicted RBP19.35■□□□□ 0.69
DDX56-209ENST00000473924 ITSN2Q9NZM3 1697 aa19.34■□□□□ 0.69
DDX56-209ENST00000473924 DENND4BO75064 1496 aaPredicted RBP19.34■□□□□ 0.69
DDX56-209ENST00000473924 RAPGEF3O95398 923 aa19.33■□□□□ 0.68
DDX56-209ENST00000473924 SCAPERQ9BY12 1400 aa19.33■□□□□ 0.68
DDX56-209ENST00000473924 SAMD9LQ8IVG5 1584 aa19.27■□□□□ 0.67
DDX56-209ENST00000473924 ABCC1P33527 1531 aa19.26■□□□□ 0.67
DDX56-209ENST00000473924 RICTORQ6R327 1708 aa19.26■□□□□ 0.67
DDX56-209ENST00000473924 FRMPD1Q5SYB0 1578 aa19.26■□□□□ 0.67
DDX56-209ENST00000473924 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
DDX56-209ENST00000473924 PLEKHH2Q8IVE3 1493 aa19.25■□□□□ 0.67
DDX56-209ENST00000473924 MYOM3Q5VTT5 1437 aa19.24■□□□□ 0.67
DDX56-209ENST00000473924 ZNF518AQ6AHZ1 1483 aa19.23■□□□□ 0.67
DDX56-209ENST00000473924 PPARGC1BQ86YN6 1023 aaKnown RBP19.23■□□□□ 0.67
DDX56-209ENST00000473924 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
DDX56-209ENST00000473924 SYCP2Q9BX26 1530 aa19.22■□□□□ 0.67
DDX56-209ENST00000473924 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
DDX56-209ENST00000473924 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.67
DDX56-209ENST00000473924 AFAP1Q8N556 730 aa19.22■□□□□ 0.67
DDX56-209ENST00000473924 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
DDX56-209ENST00000473924 KIAA1107Q9UPP5 1409 aa19.21■□□□□ 0.67
DDX56-209ENST00000473924 MIA2Q96PC5 1412 aa19.2■□□□□ 0.66
DDX56-209ENST00000473924 TRAPPC8Q9Y2L5 1435 aa19.2■□□□□ 0.66
DDX56-209ENST00000473924 CAMSAP2Q08AD1 1489 aa19.2■□□□□ 0.66
DDX56-209ENST00000473924 ZMYM4Q5VZL5 1548 aa19.2■□□□□ 0.66
DDX56-209ENST00000473924 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
DDX56-209ENST00000473924 MAGI2Q86UL8 1455 aa19.17■□□□□ 0.66
DDX56-209ENST00000473924 ZFYVE16Q7Z3T8 1539 aa19.16■□□□□ 0.66
DDX56-209ENST00000473924 KDM5CP41229 1560 aa19.16■□□□□ 0.66
DDX56-209ENST00000473924 HECW2Q9P2P5 1572 aa19.15■□□□□ 0.66
DDX56-209ENST00000473924 FGD6Q6ZV73 1430 aa19.14■□□□□ 0.65
DDX56-209ENST00000473924 ARHGEF40Q8TER5 1519 aa19.14■□□□□ 0.65
DDX56-209ENST00000473924 RSPH4AQ5TD94 716 aa19.13■□□□□ 0.65
DDX56-209ENST00000473924 SPAG9O60271 1321 aaKnown RBP19.13■□□□□ 0.65
DDX56-209ENST00000473924 YEATS2Q9ULM3 1422 aa19.13■□□□□ 0.65
DDX56-209ENST00000473924 MBD5Q9P267 1494 aa19.13■□□□□ 0.65
DDX56-209ENST00000473924 PTPN23Q9H3S7 1636 aa19.12■□□□□ 0.65
DDX56-209ENST00000473924 MLH3Q9UHC1 1453 aa19.12■□□□□ 0.65
DDX56-209ENST00000473924 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
DDX56-209ENST00000473924 ARID4BQ4LE39 1312 aaPredicted RBP19.09■□□□□ 0.65
DDX56-209ENST00000473924 ARHGEF5Q12774 1597 aa19.08■□□□□ 0.65
DDX56-209ENST00000473924 TSPY4P0CV99 314 aa19.08■□□□□ 0.64
DDX56-209ENST00000473924 TSPY10P0CW01 314 aa19.08■□□□□ 0.64
DDX56-209ENST00000473924 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.64
DDX56-209ENST00000473924 ATP10AO60312 1499 aa19.08■□□□□ 0.64
DDX56-209ENST00000473924 KIDINS220Q9ULH0 1771 aa19.07■□□□□ 0.64
DDX56-209ENST00000473924 ATP7AQ04656 1500 aa19.07■□□□□ 0.64
DDX56-209ENST00000473924 TCOF1Q13428 1488 aaKnown RBP19.07■□□□□ 0.64
DDX56-209ENST00000473924 DIP2CQ9Y2E4 1556 aa19.06■□□□□ 0.64
DDX56-209ENST00000473924 ABCA6Q8N139 1617 aa19.05■□□□□ 0.64
DDX56-209ENST00000473924 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
DDX56-209ENST00000473924 INO80Q9ULG1 1556 aaPredicted RBP19.05■□□□□ 0.64
DDX56-209ENST00000473924 RTEL1-TNFRSF6BF6WH68 1400 aa19.03■□□□□ 0.64
DDX56-209ENST00000473924 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
DDX56-209ENST00000473924 DAPK1P53355 1430 aa19■□□□□ 0.63
DDX56-209ENST00000473924 ABCC5O15440 1437 aa18.99■□□□□ 0.63
DDX56-209ENST00000473924 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
DDX56-209ENST00000473924 CROCC2H7BZ55 1655 aa18.98■□□□□ 0.63
DDX56-209ENST00000473924 MAST1Q9Y2H9 1570 aa18.98■□□□□ 0.63
DDX56-209ENST00000473924 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
DDX56-209ENST00000473924 MLECQ14165 292 aa18.97■□□□□ 0.63
DDX56-209ENST00000473924 ADGBQ8N7X0 1667 aa18.97■□□□□ 0.63
DDX56-209ENST00000473924 A2MP01023 1474 aa18.97■□□□□ 0.63
DDX56-209ENST00000473924 SHANK2Q9UPX8 1470 aa18.97■□□□□ 0.63
DDX56-209ENST00000473924 KDM4FA0A1W2PPD8 638 aa18.96■□□□□ 0.63
DDX56-209ENST00000473924 BCORL1Q5H9F3 1711 aa18.94■□□□□ 0.62
DDX56-209ENST00000473924 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
DDX56-209ENST00000473924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.93■□□□□ 0.62
DDX56-209ENST00000473924 RRBP1Q9P2E9 1410 aaKnown RBP18.93■□□□□ 0.62
DDX56-209ENST00000473924 ITGAEP38570 1179 aa18.93■□□□□ 0.62
DDX56-209ENST00000473924 AGLP35573 1532 aa18.93■□□□□ 0.62
DDX56-209ENST00000473924 DHX29Q7Z478 1369 aaKnown RBP18.92■□□□□ 0.62
DDX56-209ENST00000473924 PLXNC1O60486 1568 aa18.91■□□□□ 0.62
DDX56-209ENST00000473924 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
DDX56-209ENST00000473924 ANKRD30AQ9BXX3 1397 aa18.9■□□□□ 0.62
DDX56-209ENST00000473924 ADAMTSL3P82987 1691 aa18.89■□□□□ 0.61
DDX56-209ENST00000473924 KIF15Q9NS87 1388 aa18.88■□□□□ 0.61
DDX56-209ENST00000473924 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
DDX56-209ENST00000473924 MADDQ8WXG6 1647 aa18.86■□□□□ 0.61
DDX56-209ENST00000473924 DUOX2Q9NRD8 1548 aa18.86■□□□□ 0.61
DDX56-209ENST00000473924 KIF3BO15066 747 aa18.86■□□□□ 0.61
DDX56-209ENST00000473924 GGT6Q6P531 493 aa18.86■□□□□ 0.61
DDX56-209ENST00000473924 NCOA1Q15788 1441 aa18.85■□□□□ 0.61
DDX56-209ENST00000473924 ADGRL2O95490 1459 aa18.84■□□□□ 0.61
DDX56-209ENST00000473924 PTPRKQ15262 1439 aa18.84■□□□□ 0.61
DDX56-209ENST00000473924 FER1L4A9Z1Z3 1794 aa18.84■□□□□ 0.61
DDX56-209ENST00000473924 RIMS1Q86UR5 1692 aaKnown RBP18.83■□□□□ 0.61
DDX56-209ENST00000473924 ERBINQ96RT1 1412 aa18.81■□□□□ 0.6
DDX56-209ENST00000473924 PTPRMP28827 1452 aa18.8■□□□□ 0.6
DDX56-209ENST00000473924 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
DDX56-209ENST00000473924 EIF2AK4Q9P2K8 1649 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms