RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 MAGI2Q86UL8 1455 aa14.19□□□□□ -0.14
SMG5-203ENST00000473643 POGZQ7Z3K3 1410 aa14.19□□□□□ -0.14
SMG5-203ENST00000473643 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
SMG5-203ENST00000473643 AFAP1Q8N556 730 aa14.17□□□□□ -0.14
SMG5-203ENST00000473643 RICTORQ6R327 1708 aa14.17□□□□□ -0.14
SMG5-203ENST00000473643 ARHGAP5Q13017 1502 aa14.16□□□□□ -0.14
SMG5-203ENST00000473643 ZMYM4Q5VZL5 1548 aa14.16□□□□□ -0.14
SMG5-203ENST00000473643 KANK4Q5T7N3 995 aaPredicted RBP14.16□□□□□ -0.14
SMG5-203ENST00000473643 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.14
SMG5-203ENST00000473643 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
SMG5-203ENST00000473643 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
SMG5-203ENST00000473643 LRRC9Q6ZRR7 1453 aa14.14□□□□□ -0.15
SMG5-203ENST00000473643 GPATCH8Q9UKJ3 1502 aaKnown RBP14.14□□□□□ -0.15
SMG5-203ENST00000473643 MTUS2Q5JR59 1369 aa14.13□□□□□ -0.15
SMG5-203ENST00000473643 ARHGEF40Q8TER5 1519 aa14.13□□□□□ -0.15
SMG5-203ENST00000473643 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
SMG5-203ENST00000473643 ZFYVE16Q7Z3T8 1539 aa14.12□□□□□ -0.15
SMG5-203ENST00000473643 ARHGEF12Q9NZN5 1544 aa14.11□□□□□ -0.15
SMG5-203ENST00000473643 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
SMG5-203ENST00000473643 ATP10AO60312 1499 aa14.11□□□□□ -0.15
SMG5-203ENST00000473643 CDC42BPBQ9Y5S2 1711 aa14.1□□□□□ -0.15
SMG5-203ENST00000473643 TRAPPC8Q9Y2L5 1435 aa14.1□□□□□ -0.15
SMG5-203ENST00000473643 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
SMG5-203ENST00000473643 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
SMG5-203ENST00000473643 PREX2Q70Z35 1606 aa14.09□□□□□ -0.15
SMG5-203ENST00000473643 MLH3Q9UHC1 1453 aa14.09□□□□□ -0.15
SMG5-203ENST00000473643 ADAMTSL3P82987 1691 aa14.09□□□□□ -0.15
SMG5-203ENST00000473643 EHBP1L1Q8N3D4 1523 aa14.09□□□□□ -0.15
SMG5-203ENST00000473643 PTPRMP28827 1452 aa14.08□□□□□ -0.16
SMG5-203ENST00000473643 KDM5CP41229 1560 aa14.08□□□□□ -0.16
SMG5-203ENST00000473643 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
SMG5-203ENST00000473643 ABCC1P33527 1531 aa14.07□□□□□ -0.16
SMG5-203ENST00000473643 HNRNPMP52272 730 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMG5-203ENST00000473643 BCORL1Q5H9F3 1711 aa14.06□□□□□ -0.16
SMG5-203ENST00000473643 CDC42BPAQ5VT25 1732 aa14.06□□□□□ -0.16
SMG5-203ENST00000473643 C9orf84Q5VXU9 1444 aa14.06□□□□□ -0.16
SMG5-203ENST00000473643 MYT1LQ9UL68 1186 aa14.05□□□□□ -0.16
SMG5-203ENST00000473643 MLECQ14165 292 aa14.04□□□□□ -0.16
SMG5-203ENST00000473643 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
SMG5-203ENST00000473643 ZNF644Q9H582 1327 aaPredicted RBP14.04□□□□□ -0.16
SMG5-203ENST00000473643 NCOA2Q15596 1464 aa14.03□□□□□ -0.16
SMG5-203ENST00000473643 PLEKHH2Q8IVE3 1493 aa14.03□□□□□ -0.16
SMG5-203ENST00000473643 SIGLEC1Q9BZZ2 1709 aa14.02□□□□□ -0.16
SMG5-203ENST00000473643 SAMD9LQ8IVG5 1584 aa14.02□□□□□ -0.16
SMG5-203ENST00000473643 SPAG9O60271 1321 aaKnown RBP14.02□□□□□ -0.17
SMG5-203ENST00000473643 MADDQ8WXG6 1647 aa14.01□□□□□ -0.17
SMG5-203ENST00000473643 HECW2Q9P2P5 1572 aa14□□□□□ -0.17
SMG5-203ENST00000473643 SUPT6HQ7KZ85 1726 aaKnown RBP14□□□□□ -0.17
SMG5-203ENST00000473643 MBD5Q9P267 1494 aa13.99□□□□□ -0.17
SMG5-203ENST00000473643 ITSN2Q9NZM3 1697 aa13.99□□□□□ -0.17
SMG5-203ENST00000473643 REREQ9P2R6 1566 aa13.99□□□□□ -0.17
SMG5-203ENST00000473643 DIP2CQ9Y2E4 1556 aa13.99□□□□□ -0.17
SMG5-203ENST00000473643 SYCP2Q9BX26 1530 aa13.99□□□□□ -0.17
SMG5-203ENST00000473643 RSPH4AQ5TD94 716 aa13.98□□□□□ -0.17
SMG5-203ENST00000473643 AGLP35573 1532 aa13.97□□□□□ -0.17
SMG5-203ENST00000473643 ABCA6Q8N139 1617 aa13.96□□□□□ -0.17
SMG5-203ENST00000473643 MYOM3Q5VTT5 1437 aa13.96□□□□□ -0.18
SMG5-203ENST00000473643 MIA2Q96PC5 1412 aa13.96□□□□□ -0.18
SMG5-203ENST00000473643 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.18
SMG5-203ENST00000473643 RTEL1-TNFRSF6BF6WH68 1400 aa13.93□□□□□ -0.18
SMG5-203ENST00000473643 CEBPAP49715 358 aaPredicted RBP13.93□□□□□ -0.18
SMG5-203ENST00000473643 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
SMG5-203ENST00000473643 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
SMG5-203ENST00000473643 RIMS1Q86UR5 1692 aaKnown RBP13.93□□□□□ -0.18
SMG5-203ENST00000473643 FGD6Q6ZV73 1430 aa13.92□□□□□ -0.18
SMG5-203ENST00000473643 RRBP1Q9P2E9 1410 aaKnown RBP13.92□□□□□ -0.18
SMG5-203ENST00000473643 ATP7AQ04656 1500 aa13.91□□□□□ -0.18
SMG5-203ENST00000473643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMG5-203ENST00000473643 LMTK3Q96Q04 1460 aa13.91□□□□□ -0.18
SMG5-203ENST00000473643 ESF1Q9H501 851 aaKnown RBP13.9□□□□□ -0.18
SMG5-203ENST00000473643 A2MP01023 1474 aa13.9□□□□□ -0.18
SMG5-203ENST00000473643 CAMSAP2Q08AD1 1489 aa13.9□□□□□ -0.18
SMG5-203ENST00000473643 INO80Q9ULG1 1556 aaPredicted RBP13.89□□□□□ -0.19
SMG5-203ENST00000473643 CCDC141Q6ZP82 1450 aa13.89□□□□□ -0.19
SMG5-203ENST00000473643 DHX29Q7Z478 1369 aaKnown RBP13.89□□□□□ -0.19
SMG5-203ENST00000473643 TSPY4P0CV99 314 aa13.89□□□□□ -0.19
SMG5-203ENST00000473643 TSPY10P0CW01 314 aa13.89□□□□□ -0.19
SMG5-203ENST00000473643 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
SMG5-203ENST00000473643 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
SMG5-203ENST00000473643 FER1L4A9Z1Z3 1794 aa13.88□□□□□ -0.19
SMG5-203ENST00000473643 HSPA2P54652 639 aa13.87□□□□□ -0.19
SMG5-203ENST00000473643 CNTLNQ9NXG0 1405 aa13.87□□□□□ -0.19
SMG5-203ENST00000473643 PLXNC1O60486 1568 aa13.87□□□□□ -0.19
SMG5-203ENST00000473643 GGT6Q6P531 493 aa13.86□□□□□ -0.19
SMG5-203ENST00000473643 ZMYM3Q14202 1370 aa13.85□□□□□ -0.19
SMG5-203ENST00000473643 ARHGEF5Q12774 1597 aa13.85□□□□□ -0.19
SMG5-203ENST00000473643 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
SMG5-203ENST00000473643 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
SMG5-203ENST00000473643 KIF3BO15066 747 aa13.82□□□□□ -0.2
SMG5-203ENST00000473643 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
SMG5-203ENST00000473643 SETD1BQ9UPS6 1966 aaKnown RBP13.8□□□□□ -0.2
SMG5-203ENST00000473643 ADGBQ8N7X0 1667 aa13.8□□□□□ -0.2
SMG5-203ENST00000473643 NPATQ14207 1427 aa13.8□□□□□ -0.2
SMG5-203ENST00000473643 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
SMG5-203ENST00000473643 ABCC5O15440 1437 aa13.78□□□□□ -0.2
SMG5-203ENST00000473643 C3P01024 1663 aa13.78□□□□□ -0.2
SMG5-203ENST00000473643 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.21
SMG5-203ENST00000473643 DAPK1P53355 1430 aa13.76□□□□□ -0.21
SMG5-203ENST00000473643 PTPRKQ15262 1439 aa13.76□□□□□ -0.21
SMG5-203ENST00000473643 WASHC2CQ9Y4E1 1318 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms