RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 HOXB1P14653 301 aaPredicted RBP11.44□□□□□ -0.58
GINS1-202ENST00000473460 DOK7Q18PE1 504 aa11.44□□□□□ -0.58
GINS1-202ENST00000473460 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
GINS1-202ENST00000473460 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
GINS1-202ENST00000473460 KRTAP3-3Q9BYR6 98 aa11.41□□□□□ -0.58
GINS1-202ENST00000473460 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
GINS1-202ENST00000473460 MMRN1Q13201 1228 aa11.37□□□□□ -0.59
GINS1-202ENST00000473460 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
GINS1-202ENST00000473460 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
GINS1-202ENST00000473460 ZSWIM6Q9HCJ5 1215 aa11.34□□□□□ -0.59
GINS1-202ENST00000473460 KIF3CO14782 793 aa11.33□□□□□ -0.6
GINS1-202ENST00000473460 ERBB3P21860 1342 aa11.32□□□□□ -0.6
GINS1-202ENST00000473460 PPP1R37O75864 691 aa11.29□□□□□ -0.6
GINS1-202ENST00000473460 C2orf72A6NCS6 295 aa11.28□□□□□ -0.6
GINS1-202ENST00000473460 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
GINS1-202ENST00000473460 ARSIQ5FYB1 569 aa11.26□□□□□ -0.61
GINS1-202ENST00000473460 KHSRPQ92945 711 aaKnown RBP eCLIP11.26□□□□□ -0.61
GINS1-202ENST00000473460 HS6ST3Q8IZP7 471 aa11.24□□□□□ -0.61
GINS1-202ENST00000473460 ZNF687Q8N1G0 1237 aa11.21□□□□□ -0.61
GINS1-202ENST00000473460 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
GINS1-202ENST00000473460 SLC34A2O95436 690 aa11.16□□□□□ -0.62
GINS1-202ENST00000473460 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
GINS1-202ENST00000473460 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
GINS1-202ENST00000473460 NUDT7P0C024 238 aa11.14□□□□□ -0.63
GINS1-202ENST00000473460 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
GINS1-202ENST00000473460 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
GINS1-202ENST00000473460 PCDHGA4Q9Y5G9 962 aa11.13□□□□□ -0.63
GINS1-202ENST00000473460 LHX6Q9UPM6 363 aa11.09□□□□□ -0.63
GINS1-202ENST00000473460 FOXK1P85037 733 aa11.07□□□□□ -0.64
GINS1-202ENST00000473460 POTEEQ6S8J3 1075 aa11.06□□□□□ -0.64
GINS1-202ENST00000473460 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
GINS1-202ENST00000473460 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
GINS1-202ENST00000473460 DSG2Q14126 1118 aa11.04□□□□□ -0.64
GINS1-202ENST00000473460 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
GINS1-202ENST00000473460 PTCD2Q8WV60 388 aaKnown RBP11.04□□□□□ -0.64
GINS1-202ENST00000473460 RNF166Q96A37 237 aaPredicted RBP11.03□□□□□ -0.64
GINS1-202ENST00000473460 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
GINS1-202ENST00000473460 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
GINS1-202ENST00000473460 ANKRD13DQ6ZTN6 518 aa11□□□□□ -0.65
GINS1-202ENST00000473460 AXIN2Q9Y2T1 843 aa10.99□□□□□ -0.65
GINS1-202ENST00000473460 PBX2P40425 430 aa10.97□□□□□ -0.65
GINS1-202ENST00000473460 CRISPLD2Q9H0B8 497 aa10.97□□□□□ -0.65
GINS1-202ENST00000473460 PTGER2P43116 358 aa10.96□□□□□ -0.65
GINS1-202ENST00000473460 GTPBP6O43824 516 aaPredicted RBP10.95□□□□□ -0.66
GINS1-202ENST00000473460 RYDENQ9NUL5 291 aaKnown RBP10.95□□□□□ -0.66
GINS1-202ENST00000473460 NCKAP5LQ9HCH0 1330 aa10.93□□□□□ -0.66
GINS1-202ENST00000473460 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
GINS1-202ENST00000473460 OXER1Q8TDS5 423 aa10.91□□□□□ -0.66
GINS1-202ENST00000473460 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
GINS1-202ENST00000473460 PPP1R15BQ5SWA1 713 aa10.89□□□□□ -0.67
GINS1-202ENST00000473460 TBC1D12O60347 775 aa10.88□□□□□ -0.67
GINS1-202ENST00000473460 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
GINS1-202ENST00000473460 UPF1Q92900 1129 aaKnown RBP eCLIP10.87□□□□□ -0.67
GINS1-202ENST00000473460 PSEN2P49810 448 aa10.86□□□□□ -0.67
GINS1-202ENST00000473460 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
GINS1-202ENST00000473460 PDE4AP27815 886 aa10.84□□□□□ -0.67
GINS1-202ENST00000473460 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
GINS1-202ENST00000473460 DCAF8L2P0C7V8 631 aa10.82□□□□□ -0.68
GINS1-202ENST00000473460 HRO43593 1189 aa10.81□□□□□ -0.68
GINS1-202ENST00000473460 TK2O00142 265 aa10.8□□□□□ -0.68
GINS1-202ENST00000473460 MFSD10Q14728 455 aa10.8□□□□□ -0.68
GINS1-202ENST00000473460 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
GINS1-202ENST00000473460 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
GINS1-202ENST00000473460 DDX27Q96GQ7 796 aaKnown RBP10.78□□□□□ -0.68
GINS1-202ENST00000473460 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
GINS1-202ENST00000473460 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
GINS1-202ENST00000473460 ANO8Q9HCE9 1232 aaPredicted RBP10.76□□□□□ -0.69
GINS1-202ENST00000473460 FOSBP53539 338 aa10.75□□□□□ -0.69
GINS1-202ENST00000473460 EVI5O60447 810 aa10.73□□□□□ -0.69
GINS1-202ENST00000473460 BCL2L12Q9HB09 334 aa10.73□□□□□ -0.69
GINS1-202ENST00000473460 EMILIN3Q9NT22 766 aa10.73□□□□□ -0.69
GINS1-202ENST00000473460 JPH4Q96JJ6 628 aa10.71□□□□□ -0.69
GINS1-202ENST00000473460 VPS9D1Q9Y2B5 631 aa10.71□□□□□ -0.69
GINS1-202ENST00000473460 HCSTQ9UBK5 93 aa10.68□□□□□ -0.7
GINS1-202ENST00000473460 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
GINS1-202ENST00000473460 KCNH8Q96L42 1107 aa10.67□□□□□ -0.7
GINS1-202ENST00000473460 SLC4A5Q9BY07 1137 aa10.67□□□□□ -0.7
GINS1-202ENST00000473460 ADAM33Q9BZ11 813 aa10.67□□□□□ -0.7
GINS1-202ENST00000473460 PTPREP23469 700 aa10.66□□□□□ -0.7
GINS1-202ENST00000473460 ZDHHC16Q969W1 377 aa10.65□□□□□ -0.7
GINS1-202ENST00000473460 KCTD12Q96CX2 325 aaKnown RBP10.65□□□□□ -0.7
GINS1-202ENST00000473460 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
GINS1-202ENST00000473460 BHMG1C9JSJ3 638 aaPredicted RBP10.64□□□□□ -0.71
GINS1-202ENST00000473460 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
GINS1-202ENST00000473460 BBXQ8WY36 941 aaPredicted RBP10.62□□□□□ -0.71
GINS1-202ENST00000473460 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
GINS1-202ENST00000473460 PCDHGA10Q9Y5H3 936 aa10.62□□□□□ -0.71
GINS1-202ENST00000473460 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
GINS1-202ENST00000473460 DPYSL4O14531 572 aa10.56□□□□□ -0.72
GINS1-202ENST00000473460 PHF14O94880 888 aa10.56□□□□□ -0.72
GINS1-202ENST00000473460 PPP1R3GB7ZBB8 358 aa10.55□□□□□ -0.72
GINS1-202ENST00000473460 COL9A1P20849 921 aa10.55□□□□□ -0.72
GINS1-202ENST00000473460 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
GINS1-202ENST00000473460 PTPN5P54829 565 aa10.53□□□□□ -0.72
GINS1-202ENST00000473460 PROX2Q3B8N5 592 aa10.53□□□□□ -0.72
GINS1-202ENST00000473460 THSD4Q6ZMP0 1018 aa10.53□□□□□ -0.72
GINS1-202ENST00000473460 MRPL50Q8N5N7 158 aaKnown RBP10.52□□□□□ -0.73
GINS1-202ENST00000473460 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
GINS1-202ENST00000473460 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
GINS1-202ENST00000473460 WNT2BQ93097 391 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms