RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 ARHGAP5Q13017 1502 aa28.91■■■□□ 2.22
TNFRSF25-211ENST00000473343 CDC42BPBQ9Y5S2 1711 aa28.91■■■□□ 2.22
TNFRSF25-211ENST00000473343 TCOF1Q13428 1488 aaKnown RBP28.9■■■□□ 2.22
TNFRSF25-211ENST00000473343 PTPN23Q9H3S7 1636 aa28.9■■■□□ 2.22
TNFRSF25-211ENST00000473343 MAP3K4Q9Y6R4 1608 aa28.9■■■□□ 2.22
TNFRSF25-211ENST00000473343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.89■■■□□ 2.22
TNFRSF25-211ENST00000473343 FAM50AQ14320 339 aaKnown RBP28.88■■■□□ 2.21
TNFRSF25-211ENST00000473343 EFCAB2Q5VUJ9 269 aa28.88■■■□□ 2.21
TNFRSF25-211ENST00000473343 ZNF644Q9H582 1327 aaPredicted RBP28.87■■■□□ 2.21
TNFRSF25-211ENST00000473343 ZNF777Q9ULD5 760 aaPredicted RBP28.87■■■□□ 2.21
TNFRSF25-211ENST00000473343 KIF13AQ9H1H9 1805 aa28.85■■■□□ 2.21
TNFRSF25-211ENST00000473343 CAMSAP2Q08AD1 1489 aa28.84■■■□□ 2.21
TNFRSF25-211ENST00000473343 FANCAO15360 1455 aa28.84■■■□□ 2.21
TNFRSF25-211ENST00000473343 SAMD9LQ8IVG5 1584 aa28.81■■■□□ 2.2
TNFRSF25-211ENST00000473343 PLEKHH2Q8IVE3 1493 aa28.77■■■□□ 2.2
TNFRSF25-211ENST00000473343 TRHP20396 242 aaPredicted RBP28.76■■■□□ 2.19
TNFRSF25-211ENST00000473343 KIAA1107Q9UPP5 1409 aa28.76■■■□□ 2.19
TNFRSF25-211ENST00000473343 NEO1Q92859 1461 aa28.75■■■□□ 2.19
TNFRSF25-211ENST00000473343 CFAP74Q9C0B2 1584 aa28.74■■■□□ 2.19
TNFRSF25-211ENST00000473343 AKNAQ7Z591 1439 aa28.74■■■□□ 2.19
TNFRSF25-211ENST00000473343 ABCC1P33527 1531 aa28.73■■■□□ 2.19
TNFRSF25-211ENST00000473343 MBD5Q9P267 1494 aa28.73■■■□□ 2.19
TNFRSF25-211ENST00000473343 PCGF6Q9BYE7 350 aa28.72■■■□□ 2.19
TNFRSF25-211ENST00000473343 PPRC1Q5VV67 1664 aaKnown RBP28.72■■■□□ 2.19
TNFRSF25-211ENST00000473343 TEX14Q8IWB6 1497 aa28.72■■■□□ 2.19
TNFRSF25-211ENST00000473343 HNRNPMP52272 730 aaKnown RBP eCLIP28.71■■■□□ 2.19
TNFRSF25-211ENST00000473343 SYCP2Q9BX26 1530 aa28.71■■■□□ 2.19
TNFRSF25-211ENST00000473343 ITGAEP38570 1179 aa28.7■■■□□ 2.18
TNFRSF25-211ENST00000473343 ADGRL1O94910 1474 aa28.7■■■□□ 2.18
TNFRSF25-211ENST00000473343 ARHGEF12Q9NZN5 1544 aa28.7■■■□□ 2.18
TNFRSF25-211ENST00000473343 TSPOAP1O95153 1857 aa28.69■■■□□ 2.18
TNFRSF25-211ENST00000473343 ABCC5O15440 1437 aa28.68■■■□□ 2.18
TNFRSF25-211ENST00000473343 DAPK1P53355 1430 aa28.68■■■□□ 2.18
TNFRSF25-211ENST00000473343 RSPH4AQ5TD94 716 aa28.67■■■□□ 2.18
TNFRSF25-211ENST00000473343 DNMT1P26358 1616 aaKnown RBP28.67■■■□□ 2.18
TNFRSF25-211ENST00000473343 ARHGEF5Q12774 1597 aa28.67■■■□□ 2.18
TNFRSF25-211ENST00000473343 SCAPERQ9BY12 1400 aa28.66■■■□□ 2.18
TNFRSF25-211ENST00000473343 PTPRKQ15262 1439 aa28.65■■■□□ 2.18
TNFRSF25-211ENST00000473343 CCDC141Q6ZP82 1450 aa28.63■■■□□ 2.17
TNFRSF25-211ENST00000473343 TRAPPC8Q9Y2L5 1435 aa28.62■■■□□ 2.17
TNFRSF25-211ENST00000473343 SHANK2Q9UPX8 1470 aa28.58■■■□□ 2.17
TNFRSF25-211ENST00000473343 TSPY4P0CV99 314 aa28.57■■■□□ 2.16
TNFRSF25-211ENST00000473343 TSPY10P0CW01 314 aa28.57■■■□□ 2.16
TNFRSF25-211ENST00000473343 AFAP1Q8N556 730 aa28.56■■■□□ 2.16
TNFRSF25-211ENST00000473343 POGZQ7Z3K3 1410 aa28.56■■■□□ 2.16
TNFRSF25-211ENST00000473343 DENND4BO75064 1496 aaPredicted RBP28.56■■■□□ 2.16
TNFRSF25-211ENST00000473343 CROCC2H7BZ55 1655 aa28.55■■■□□ 2.16
TNFRSF25-211ENST00000473343 CHIC2Q9UKJ5 165 aa28.54■■■□□ 2.16
TNFRSF25-211ENST00000473343 ZNF518AQ6AHZ1 1483 aa28.54■■■□□ 2.16
TNFRSF25-211ENST00000473343 C9orf84Q5VXU9 1444 aa28.54■■■□□ 2.16
TNFRSF25-211ENST00000473343 ROCK1Q13464 1354 aa28.51■■■□□ 2.15
TNFRSF25-211ENST00000473343 RAPGEF3O95398 923 aa28.5■■■□□ 2.15
TNFRSF25-211ENST00000473343 MAST1Q9Y2H9 1570 aa28.5■■■□□ 2.15
TNFRSF25-211ENST00000473343 ADGRL2O95490 1459 aa28.49■■■□□ 2.15
TNFRSF25-211ENST00000473343 KDM5CP41229 1560 aa28.48■■■□□ 2.15
TNFRSF25-211ENST00000473343 SPAG9O60271 1321 aaKnown RBP28.48■■■□□ 2.15
TNFRSF25-211ENST00000473343 RTEL1-TNFRSF6BF6WH68 1400 aa28.47■■■□□ 2.15
TNFRSF25-211ENST00000473343 NCOA1Q15788 1441 aa28.47■■■□□ 2.15
TNFRSF25-211ENST00000473343 COL17A1Q9UMD9 1497 aaPredicted RBP28.46■■■□□ 2.15
TNFRSF25-211ENST00000473343 ANKRD30AQ9BXX3 1397 aa28.46■■■□□ 2.15
TNFRSF25-211ENST00000473343 RICTORQ6R327 1708 aa28.45■■■□□ 2.15
TNFRSF25-211ENST00000473343 HFM1A2PYH4 1435 aa28.44■■■□□ 2.14
TNFRSF25-211ENST00000473343 FRMPD1Q5SYB0 1578 aa28.43■■■□□ 2.14
TNFRSF25-211ENST00000473343 RRP7BPQ9NSQ0 103 aa28.43■■■□□ 2.14
TNFRSF25-211ENST00000473343 ZFYVE16Q7Z3T8 1539 aa28.43■■■□□ 2.14
TNFRSF25-211ENST00000473343 ADGBQ8N7X0 1667 aa28.43■■■□□ 2.14
TNFRSF25-211ENST00000473343 MLH3Q9UHC1 1453 aa28.42■■■□□ 2.14
TNFRSF25-211ENST00000473343 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
TNFRSF25-211ENST00000473343 NAIPQ13075 1403 aa28.4■■■□□ 2.14
TNFRSF25-211ENST00000473343 ATP7AQ04656 1500 aa28.4■■■□□ 2.14
TNFRSF25-211ENST00000473343 PLXNC1O60486 1568 aa28.38■■■□□ 2.13
TNFRSF25-211ENST00000473343 HECW2Q9P2P5 1572 aa28.38■■■□□ 2.13
TNFRSF25-211ENST00000473343 ZMYM4Q5VZL5 1548 aa28.37■■■□□ 2.13
TNFRSF25-211ENST00000473343 KIF15Q9NS87 1388 aa28.37■■■□□ 2.13
TNFRSF25-211ENST00000473343 MYT1LQ9UL68 1186 aa28.37■■■□□ 2.13
TNFRSF25-211ENST00000473343 SETD5Q9C0A6 1442 aa28.36■■■□□ 2.13
TNFRSF25-211ENST00000473343 KIDINS220Q9ULH0 1771 aa28.34■■■□□ 2.13
TNFRSF25-211ENST00000473343 MAGI2Q86UL8 1455 aa28.33■■■□□ 2.13
TNFRSF25-211ENST00000473343 GCC2Q8IWJ2 1684 aa28.31■■■□□ 2.12
TNFRSF25-211ENST00000473343 KDM6BO15054 1643 aa28.31■■■□□ 2.12
TNFRSF25-211ENST00000473343 RAB3GAP2Q9H2M9 1393 aa28.3■■■□□ 2.12
TNFRSF25-211ENST00000473343 DUOX2Q9NRD8 1548 aa28.28■■■□□ 2.12
TNFRSF25-211ENST00000473343 ANKRD50Q9ULJ7 1429 aa28.28■■■□□ 2.12
TNFRSF25-211ENST00000473343 YEATS2Q9ULM3 1422 aa28.27■■■□□ 2.12
TNFRSF25-211ENST00000473343 HRCP23327 699 aa28.25■■■□□ 2.11
TNFRSF25-211ENST00000473343 ABCA6Q8N139 1617 aa28.25■■■□□ 2.11
TNFRSF25-211ENST00000473343 DHX29Q7Z478 1369 aaKnown RBP28.23■■■□□ 2.11
TNFRSF25-211ENST00000473343 DIP2CQ9Y2E4 1556 aa28.23■■■□□ 2.11
TNFRSF25-211ENST00000473343 ERBINQ96RT1 1412 aa28.23■■■□□ 2.11
TNFRSF25-211ENST00000473343 A2MP01023 1474 aa28.21■■■□□ 2.11
TNFRSF25-211ENST00000473343 ARHGEF40Q8TER5 1519 aa28.18■■■□□ 2.1
TNFRSF25-211ENST00000473343 ATP10AO60312 1499 aa28.17■■■□□ 2.1
TNFRSF25-211ENST00000473343 ACIN1Q9UKV3 1341 aaKnown RBP28.14■■■□□ 2.09
TNFRSF25-211ENST00000473343 REREQ9P2R6 1566 aa28.11■■■□□ 2.09
TNFRSF25-211ENST00000473343 EIF2AK4Q9P2K8 1649 aaKnown RBP28.1■■■□□ 2.09
TNFRSF25-211ENST00000473343 KIF3BO15066 747 aa28.08■■■□□ 2.09
TNFRSF25-211ENST00000473343 TRIM52Q96A61 297 aa28.07■■■□□ 2.08
TNFRSF25-211ENST00000473343 BCORL1Q5H9F3 1711 aa28.04■■■□□ 2.08
TNFRSF25-211ENST00000473343 UNC13BO14795 1591 aa28.04■■■□□ 2.08
TNFRSF25-211ENST00000473343 AGLP35573 1532 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms