RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 MYO5CQ9NQX4 1742 aa21.71■■□□□ 1.07
HIF3A-206ENST00000472815 WDR7Q9Y4E6 1490 aa21.7■■□□□ 1.06
HIF3A-206ENST00000472815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.06
HIF3A-206ENST00000472815 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
HIF3A-206ENST00000472815 HFM1A2PYH4 1435 aa21.68■■□□□ 1.06
HIF3A-206ENST00000472815 TTC37Q6PGP7 1564 aa21.67■■□□□ 1.06
HIF3A-206ENST00000472815 AKNAQ7Z591 1439 aa21.67■■□□□ 1.06
HIF3A-206ENST00000472815 DAPK1P53355 1430 aa21.67■■□□□ 1.06
HIF3A-206ENST00000472815 CDC42BPBQ9Y5S2 1711 aa21.66■■□□□ 1.06
HIF3A-206ENST00000472815 PTPRKQ15262 1439 aa21.65■■□□□ 1.06
HIF3A-206ENST00000472815 CLSPNQ9HAW4 1339 aa21.64■■□□□ 1.06
HIF3A-206ENST00000472815 KCNH8Q96L42 1107 aa21.64■■□□□ 1.06
HIF3A-206ENST00000472815 ZNF777Q9ULD5 760 aaPredicted RBP21.64■■□□□ 1.06
HIF3A-206ENST00000472815 GCC2Q8IWJ2 1684 aa21.63■■□□□ 1.05
HIF3A-206ENST00000472815 ARHGAP5Q13017 1502 aa21.62■■□□□ 1.05
HIF3A-206ENST00000472815 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
HIF3A-206ENST00000472815 ROCK1Q13464 1354 aa21.62■■□□□ 1.05
HIF3A-206ENST00000472815 CROCC2H7BZ55 1655 aa21.62■■□□□ 1.05
HIF3A-206ENST00000472815 ZNF644Q9H582 1327 aaPredicted RBP21.61■■□□□ 1.05
HIF3A-206ENST00000472815 ACIN1Q9UKV3 1341 aaKnown RBP21.61■■□□□ 1.05
HIF3A-206ENST00000472815 DIP2BQ9P265 1576 aa21.61■■□□□ 1.05
HIF3A-206ENST00000472815 ABCC5O15440 1437 aa21.61■■□□□ 1.05
HIF3A-206ENST00000472815 PLEKHH2Q8IVE3 1493 aa21.6■■□□□ 1.05
HIF3A-206ENST00000472815 ADGBQ8N7X0 1667 aa21.6■■□□□ 1.05
HIF3A-206ENST00000472815 NAIPQ13075 1403 aa21.59■■□□□ 1.05
HIF3A-206ENST00000472815 ARAP3Q8WWN8 1544 aa21.59■■□□□ 1.05
HIF3A-206ENST00000472815 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
HIF3A-206ENST00000472815 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.05
HIF3A-206ENST00000472815 DHX57Q6P158 1386 aaKnown RBP21.58■■□□□ 1.05
HIF3A-206ENST00000472815 PLCH2O75038 1416 aa21.58■■□□□ 1.05
HIF3A-206ENST00000472815 GLI2P10070 1586 aa21.58■■□□□ 1.04
HIF3A-206ENST00000472815 SAMD9LQ8IVG5 1584 aa21.57■■□□□ 1.04
HIF3A-206ENST00000472815 SHANK2Q9UPX8 1470 aa21.57■■□□□ 1.04
HIF3A-206ENST00000472815 ABCA9Q8IUA7 1624 aa21.57■■□□□ 1.04
HIF3A-206ENST00000472815 CHIC2Q9UKJ5 165 aa21.56■■□□□ 1.04
HIF3A-206ENST00000472815 EFCAB2Q5VUJ9 269 aa21.53■■□□□ 1.04
HIF3A-206ENST00000472815 ADGRL2O95490 1459 aa21.52■■□□□ 1.04
HIF3A-206ENST00000472815 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
HIF3A-206ENST00000472815 CCDC141Q6ZP82 1450 aa21.52■■□□□ 1.04
HIF3A-206ENST00000472815 TSPY4P0CV99 314 aa21.52■■□□□ 1.03
HIF3A-206ENST00000472815 TSPY10P0CW01 314 aa21.52■■□□□ 1.03
HIF3A-206ENST00000472815 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.03
HIF3A-206ENST00000472815 MAP3K4Q9Y6R4 1608 aa21.51■■□□□ 1.03
HIF3A-206ENST00000472815 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
HIF3A-206ENST00000472815 ANKRD30AQ9BXX3 1397 aa21.51■■□□□ 1.03
HIF3A-206ENST00000472815 MBD5Q9P267 1494 aa21.49■■□□□ 1.03
HIF3A-206ENST00000472815 TSPOAP1O95153 1857 aa21.48■■□□□ 1.03
HIF3A-206ENST00000472815 SYCP2Q9BX26 1530 aa21.48■■□□□ 1.03
HIF3A-206ENST00000472815 C9orf84Q5VXU9 1444 aa21.48■■□□□ 1.03
HIF3A-206ENST00000472815 TRHP20396 242 aaPredicted RBP21.48■■□□□ 1.03
HIF3A-206ENST00000472815 NCOA1Q15788 1441 aa21.47■■□□□ 1.03
HIF3A-206ENST00000472815 HNRNPMP52272 730 aaKnown RBP eCLIP21.46■■□□□ 1.03
HIF3A-206ENST00000472815 ABCC1P33527 1531 aa21.44■■□□□ 1.02
HIF3A-206ENST00000472815 CD109Q6YHK3 1445 aa21.44■■□□□ 1.02
HIF3A-206ENST00000472815 CFAP74Q9C0B2 1584 aa21.44■■□□□ 1.02
HIF3A-206ENST00000472815 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
HIF3A-206ENST00000472815 FANCAO15360 1455 aa21.42■■□□□ 1.02
HIF3A-206ENST00000472815 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
HIF3A-206ENST00000472815 KDM6BO15054 1643 aa21.36■■□□□ 1.01
HIF3A-206ENST00000472815 PLXNC1O60486 1568 aa21.36■■□□□ 1.01
HIF3A-206ENST00000472815 TRIM52Q96A61 297 aa21.36■■□□□ 1.01
HIF3A-206ENST00000472815 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
HIF3A-206ENST00000472815 ANKRD50Q9ULJ7 1429 aa21.35■■□□□ 1.01
HIF3A-206ENST00000472815 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
HIF3A-206ENST00000472815 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
HIF3A-206ENST00000472815 ADGRL1O94910 1474 aa21.33■■□□□ 1.01
HIF3A-206ENST00000472815 NEO1Q92859 1461 aa21.31■■□□□ 1
HIF3A-206ENST00000472815 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
HIF3A-206ENST00000472815 TRAPPC8Q9Y2L5 1435 aa21.28■■□□□ 1
HIF3A-206ENST00000472815 DUOX2Q9NRD8 1548 aa21.28■■□□□ 1
HIF3A-206ENST00000472815 SCAPERQ9BY12 1400 aa21.27■■□□□ 1
HIF3A-206ENST00000472815 SPAG9O60271 1321 aaKnown RBP21.27■□□□□ 0.99
HIF3A-206ENST00000472815 ZNF518AQ6AHZ1 1483 aa21.25■□□□□ 0.99
HIF3A-206ENST00000472815 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
HIF3A-206ENST00000472815 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
HIF3A-206ENST00000472815 ZFYVE16Q7Z3T8 1539 aa21.24■□□□□ 0.99
HIF3A-206ENST00000472815 ERBINQ96RT1 1412 aa21.24■□□□□ 0.99
HIF3A-206ENST00000472815 INO80Q9ULG1 1556 aaPredicted RBP21.22■□□□□ 0.99
HIF3A-206ENST00000472815 ATP7AQ04656 1500 aa21.22■□□□□ 0.99
HIF3A-206ENST00000472815 KDM5DQ9BY66 1539 aa21.21■□□□□ 0.99
HIF3A-206ENST00000472815 SLC4A1APQ9BWU0 796 aaKnown RBP21.21■□□□□ 0.99
HIF3A-206ENST00000472815 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
HIF3A-206ENST00000472815 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
HIF3A-206ENST00000472815 UNC13BO14795 1591 aa21.18■□□□□ 0.98
HIF3A-206ENST00000472815 PZPP20742 1482 aa21.17■□□□□ 0.98
HIF3A-206ENST00000472815 NUP155O75694 1391 aa21.17■□□□□ 0.98
HIF3A-206ENST00000472815 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
HIF3A-206ENST00000472815 RICTORQ6R327 1708 aa21.16■□□□□ 0.98
HIF3A-206ENST00000472815 KDM5CP41229 1560 aa21.16■□□□□ 0.98
HIF3A-206ENST00000472815 NEUROD1Q13562 356 aa21.15■□□□□ 0.98
HIF3A-206ENST00000472815 DENND4BO75064 1496 aaPredicted RBP21.15■□□□□ 0.98
HIF3A-206ENST00000472815 SIN3AQ96ST3 1273 aa21.14■□□□□ 0.97
HIF3A-206ENST00000472815 TONSLQ96HA7 1378 aa21.13■□□□□ 0.97
HIF3A-206ENST00000472815 HECW2Q9P2P5 1572 aa21.13■□□□□ 0.97
HIF3A-206ENST00000472815 MLH3Q9UHC1 1453 aa21.12■□□□□ 0.97
HIF3A-206ENST00000472815 EIF2AK4Q9P2K8 1649 aaKnown RBP21.12■□□□□ 0.97
HIF3A-206ENST00000472815 KIDINS220Q9ULH0 1771 aa21.11■□□□□ 0.97
HIF3A-206ENST00000472815 IQGAP3Q86VI3 1631 aa21.1■□□□□ 0.97
HIF3A-206ENST00000472815 FAM135AQ9P2D6 1515 aa21.1■□□□□ 0.97
HIF3A-206ENST00000472815 FRMPD1Q5SYB0 1578 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms