RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ARHGAP5Q13017 1502 aa14.63□□□□□ -0.07
USF1-204ENST00000472217 ZFYVE16Q7Z3T8 1539 aa14.62□□□□□ -0.07
USF1-204ENST00000472217 BCORL1Q5H9F3 1711 aa14.62□□□□□ -0.07
USF1-204ENST00000472217 EFCAB2Q5VUJ9 269 aa14.62□□□□□ -0.07
USF1-204ENST00000472217 YEATS2Q9ULM3 1422 aa14.62□□□□□ -0.07
USF1-204ENST00000472217 PREX2Q70Z35 1606 aa14.62□□□□□ -0.07
USF1-204ENST00000472217 CDC42BPBQ9Y5S2 1711 aa14.61□□□□□ -0.07
USF1-204ENST00000472217 MAGI2Q86UL8 1455 aa14.61□□□□□ -0.07
USF1-204ENST00000472217 SIGLEC1Q9BZZ2 1709 aa14.6□□□□□ -0.07
USF1-204ENST00000472217 ARID4BQ4LE39 1312 aaPredicted RBP14.59□□□□□ -0.07
USF1-204ENST00000472217 HECW2Q9P2P5 1572 aa14.59□□□□□ -0.07
USF1-204ENST00000472217 MADDQ8WXG6 1647 aa14.59□□□□□ -0.07
USF1-204ENST00000472217 CEP162Q5TB80 1403 aa14.58□□□□□ -0.07
USF1-204ENST00000472217 CDC42BPAQ5VT25 1732 aa14.58□□□□□ -0.07
USF1-204ENST00000472217 PTPRMP28827 1452 aa14.57□□□□□ -0.08
USF1-204ENST00000472217 ZNF518AQ6AHZ1 1483 aa14.57□□□□□ -0.08
USF1-204ENST00000472217 KDM5CP41229 1560 aa14.56□□□□□ -0.08
USF1-204ENST00000472217 ABCC1P33527 1531 aa14.55□□□□□ -0.08
USF1-204ENST00000472217 RIMS1Q86UR5 1692 aaKnown RBP14.54□□□□□ -0.08
USF1-204ENST00000472217 ITSN2Q9NZM3 1697 aa14.54□□□□□ -0.08
USF1-204ENST00000472217 ARHGEF12Q9NZN5 1544 aa14.52□□□□□ -0.08
USF1-204ENST00000472217 ATP10AO60312 1499 aa14.52□□□□□ -0.08
USF1-204ENST00000472217 C9orf84Q5VXU9 1444 aa14.51□□□□□ -0.09
USF1-204ENST00000472217 AFAP1Q8N556 730 aa14.51□□□□□ -0.09
USF1-204ENST00000472217 SAMD9LQ8IVG5 1584 aa14.51□□□□□ -0.09
USF1-204ENST00000472217 DIP2CQ9Y2E4 1556 aa14.51□□□□□ -0.09
USF1-204ENST00000472217 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
USF1-204ENST00000472217 TRAPPC8Q9Y2L5 1435 aa14.5□□□□□ -0.09
USF1-204ENST00000472217 MTUS2Q5JR59 1369 aa14.5□□□□□ -0.09
USF1-204ENST00000472217 ABCA6Q8N139 1617 aa14.49□□□□□ -0.09
USF1-204ENST00000472217 EHBP1L1Q8N3D4 1523 aa14.49□□□□□ -0.09
USF1-204ENST00000472217 FER1L4A9Z1Z3 1794 aa14.48□□□□□ -0.09
USF1-204ENST00000472217 LOC105371045A0A1W2PR82 267 aa14.48□□□□□ -0.09
USF1-204ENST00000472217 MLH3Q9UHC1 1453 aa14.48□□□□□ -0.09
USF1-204ENST00000472217 SYCP2Q9BX26 1530 aa14.47□□□□□ -0.09
USF1-204ENST00000472217 TIAM1Q13009 1591 aa14.47□□□□□ -0.09
USF1-204ENST00000472217 REREQ9P2R6 1566 aa14.47□□□□□ -0.09
USF1-204ENST00000472217 MLECQ14165 292 aa14.46□□□□□ -0.09
USF1-204ENST00000472217 MYT1LQ9UL68 1186 aa14.46□□□□□ -0.09
USF1-204ENST00000472217 ZNF777Q9ULD5 760 aaPredicted RBP14.46□□□□□ -0.09
USF1-204ENST00000472217 KIDINS220Q9ULH0 1771 aa14.46□□□□□ -0.09
USF1-204ENST00000472217 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.1
USF1-204ENST00000472217 CFDP1Q9UEE9 299 aaPredicted RBP14.43□□□□□ -0.1
USF1-204ENST00000472217 PLEKHH2Q8IVE3 1493 aa14.43□□□□□ -0.1
USF1-204ENST00000472217 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
USF1-204ENST00000472217 LMTK3Q96Q04 1460 aa14.42□□□□□ -0.1
USF1-204ENST00000472217 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
USF1-204ENST00000472217 SUPT6HQ7KZ85 1726 aaKnown RBP14.41□□□□□ -0.1
USF1-204ENST00000472217 AGLP35573 1532 aa14.41□□□□□ -0.1
USF1-204ENST00000472217 INO80Q9ULG1 1556 aaPredicted RBP14.4□□□□□ -0.1
USF1-204ENST00000472217 HNRNPMP52272 730 aaKnown RBP eCLIP14.4□□□□□ -0.1
USF1-204ENST00000472217 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
USF1-204ENST00000472217 ATP7AQ04656 1500 aa14.4□□□□□ -0.1
USF1-204ENST00000472217 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
USF1-204ENST00000472217 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
USF1-204ENST00000472217 SPAG9O60271 1321 aaKnown RBP14.38□□□□□ -0.11
USF1-204ENST00000472217 ZNF644Q9H582 1327 aaPredicted RBP14.37□□□□□ -0.11
USF1-204ENST00000472217 LRRC9Q6ZRR7 1453 aa14.36□□□□□ -0.11
USF1-204ENST00000472217 MBD5Q9P267 1494 aa14.35□□□□□ -0.11
USF1-204ENST00000472217 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
USF1-204ENST00000472217 PREX1Q8TCU6 1659 aa14.34□□□□□ -0.11
USF1-204ENST00000472217 C3P01024 1663 aa14.33□□□□□ -0.11
USF1-204ENST00000472217 CAMSAP2Q08AD1 1489 aa14.33□□□□□ -0.12
USF1-204ENST00000472217 MAP3K1Q13233 1512 aa14.33□□□□□ -0.12
USF1-204ENST00000472217 CEBPAP49715 358 aaPredicted RBP14.33□□□□□ -0.12
USF1-204ENST00000472217 HSPA2P54652 639 aa14.32□□□□□ -0.12
USF1-204ENST00000472217 ADGBQ8N7X0 1667 aa14.32□□□□□ -0.12
USF1-204ENST00000472217 A2MP01023 1474 aa14.31□□□□□ -0.12
USF1-204ENST00000472217 CCDC141Q6ZP82 1450 aa14.3□□□□□ -0.12
USF1-204ENST00000472217 KANK4Q5T7N3 995 aaPredicted RBP14.29□□□□□ -0.12
USF1-204ENST00000472217 ESF1Q9H501 851 aaKnown RBP14.29□□□□□ -0.12
USF1-204ENST00000472217 RTEL1-TNFRSF6BF6WH68 1400 aa14.29□□□□□ -0.12
USF1-204ENST00000472217 CNTLNQ9NXG0 1405 aa14.29□□□□□ -0.12
USF1-204ENST00000472217 MROH2AA6NES4 1674 aa14.29□□□□□ -0.12
USF1-204ENST00000472217 ARHGEF5Q12774 1597 aa14.28□□□□□ -0.12
USF1-204ENST00000472217 UHRF1BP1Q6BDS2 1440 aa14.26□□□□□ -0.13
USF1-204ENST00000472217 CLTCQ00610 1675 aaKnown RBP14.26□□□□□ -0.13
USF1-204ENST00000472217 ILDR1Q86SU0 546 aaPredicted RBP14.25□□□□□ -0.13
USF1-204ENST00000472217 MYOM3Q5VTT5 1437 aa14.24□□□□□ -0.13
USF1-204ENST00000472217 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
USF1-204ENST00000472217 DHX29Q7Z478 1369 aaKnown RBP14.22□□□□□ -0.13
USF1-204ENST00000472217 GGT6Q6P531 493 aa14.22□□□□□ -0.13
USF1-204ENST00000472217 MIA2Q96PC5 1412 aa14.22□□□□□ -0.13
USF1-204ENST00000472217 SETD1BQ9UPS6 1966 aaKnown RBP14.22□□□□□ -0.13
USF1-204ENST00000472217 ZMYM3Q14202 1370 aa14.22□□□□□ -0.13
USF1-204ENST00000472217 NPATQ14207 1427 aa14.21□□□□□ -0.13
USF1-204ENST00000472217 MAST1Q9Y2H9 1570 aa14.21□□□□□ -0.14
USF1-204ENST00000472217 STRCQ7RTU9 1775 aa14.2□□□□□ -0.14
USF1-204ENST00000472217 APLP2Q06481 763 aa14.2□□□□□ -0.14
USF1-204ENST00000472217 TSPY4P0CV99 314 aa14.18□□□□□ -0.14
USF1-204ENST00000472217 TSPY10P0CW01 314 aa14.18□□□□□ -0.14
USF1-204ENST00000472217 MYO3AQ8NEV4 1616 aa14.17□□□□□ -0.14
USF1-204ENST00000472217 PHF23Q9BUL5 403 aaPredicted RBP14.17□□□□□ -0.14
USF1-204ENST00000472217 PPP6R1Q9UPN7 881 aa14.17□□□□□ -0.14
USF1-204ENST00000472217 PTPRKQ15262 1439 aa14.16□□□□□ -0.14
USF1-204ENST00000472217 KDM5DQ9BY66 1539 aa14.16□□□□□ -0.14
USF1-204ENST00000472217 FAM135AQ9P2D6 1515 aa14.16□□□□□ -0.14
USF1-204ENST00000472217 PTPN23Q9H3S7 1636 aa14.16□□□□□ -0.14
USF1-204ENST00000472217 KIF3BO15066 747 aa14.16□□□□□ -0.14
USF1-204ENST00000472217 CROCC2H7BZ55 1655 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms