RNA–Protein interactions for RNA: ENST00000472033.1

ABCA4-205, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-205ENST00000472033 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
ABCA4-205ENST00000472033 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
ABCA4-205ENST00000472033 TMC2Q8TDI7 906 aa13.1□□□□□ -0.31
ABCA4-205ENST00000472033 C2orf72A6NCS6 295 aa13.08□□□□□ -0.32
ABCA4-205ENST00000472033 KIF3CO14782 793 aa13.06□□□□□ -0.32
ABCA4-205ENST00000472033 SNPHO15079 494 aa13.05□□□□□ -0.32
ABCA4-205ENST00000472033 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.33
ABCA4-205ENST00000472033 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
ABCA4-205ENST00000472033 NCKAP5LQ9HCH0 1330 aa13□□□□□ -0.33
ABCA4-205ENST00000472033 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
ABCA4-205ENST00000472033 CRISPLD2Q9H0B8 497 aa13□□□□□ -0.33
ABCA4-205ENST00000472033 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
ABCA4-205ENST00000472033 PDE4AP27815 886 aa12.98□□□□□ -0.33
ABCA4-205ENST00000472033 HOXB3P14651 431 aaPredicted RBP12.97□□□□□ -0.33
ABCA4-205ENST00000472033 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
ABCA4-205ENST00000472033 FOXK1P85037 733 aa12.95□□□□□ -0.34
ABCA4-205ENST00000472033 DSG2Q14126 1118 aa12.95□□□□□ -0.34
ABCA4-205ENST00000472033 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
ABCA4-205ENST00000472033 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
ABCA4-205ENST00000472033 ST18O60284 1047 aa12.92□□□□□ -0.34
ABCA4-205ENST00000472033 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
ABCA4-205ENST00000472033 TSHZ2Q9NRE2 1034 aa12.92□□□□□ -0.34
ABCA4-205ENST00000472033 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
ABCA4-205ENST00000472033 PPP1R15BQ5SWA1 713 aa12.91□□□□□ -0.34
ABCA4-205ENST00000472033 LCE2DQ5TA82 110 aaPredicted RBP12.91□□□□□ -0.34
ABCA4-205ENST00000472033 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
ABCA4-205ENST00000472033 MFSD10Q14728 455 aa12.89□□□□□ -0.35
ABCA4-205ENST00000472033 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
ABCA4-205ENST00000472033 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
ABCA4-205ENST00000472033 NACADO15069 1562 aa12.85□□□□□ -0.35
ABCA4-205ENST00000472033 SLC34A2O95436 690 aa12.84□□□□□ -0.35
ABCA4-205ENST00000472033 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
ABCA4-205ENST00000472033 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
ABCA4-205ENST00000472033 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
ABCA4-205ENST00000472033 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
ABCA4-205ENST00000472033 MARVELD3Q96A59 401 aa12.8□□□□□ -0.36
ABCA4-205ENST00000472033 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
ABCA4-205ENST00000472033 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
ABCA4-205ENST00000472033 EMP3P54852 163 aa12.78□□□□□ -0.36
ABCA4-205ENST00000472033 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.36
ABCA4-205ENST00000472033 PTCD2Q8WV60 388 aaKnown RBP12.77□□□□□ -0.37
ABCA4-205ENST00000472033 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.37
ABCA4-205ENST00000472033 POTEMA6NI47 508 aa12.76□□□□□ -0.37
ABCA4-205ENST00000472033 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
ABCA4-205ENST00000472033 TBC1D12O60347 775 aa12.74□□□□□ -0.37
ABCA4-205ENST00000472033 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
ABCA4-205ENST00000472033 NUDT7P0C024 238 aa12.72□□□□□ -0.37
ABCA4-205ENST00000472033 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
ABCA4-205ENST00000472033 EMILIN3Q9NT22 766 aa12.72□□□□□ -0.37
ABCA4-205ENST00000472033 MYO15BQ96JP2 1530 aa12.72□□□□□ -0.37
ABCA4-205ENST00000472033 E2F4Q16254 413 aa12.69□□□□□ -0.38
ABCA4-205ENST00000472033 ERBB3P21860 1342 aa12.68□□□□□ -0.38
ABCA4-205ENST00000472033 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
ABCA4-205ENST00000472033 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
ABCA4-205ENST00000472033 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.38
ABCA4-205ENST00000472033 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
ABCA4-205ENST00000472033 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
ABCA4-205ENST00000472033 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
ABCA4-205ENST00000472033 DPYSL4O14531 572 aa12.63□□□□□ -0.39
ABCA4-205ENST00000472033 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
ABCA4-205ENST00000472033 LHX6Q9UPM6 363 aa12.63□□□□□ -0.39
ABCA4-205ENST00000472033 EVI5O60447 810 aa12.62□□□□□ -0.39
ABCA4-205ENST00000472033 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
ABCA4-205ENST00000472033 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
ABCA4-205ENST00000472033 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
ABCA4-205ENST00000472033 KDM2AQ9Y2K7 1162 aa12.59□□□□□ -0.39
ABCA4-205ENST00000472033 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
ABCA4-205ENST00000472033 KCNV2Q8TDN2 545 aa12.57□□□□□ -0.4
ABCA4-205ENST00000472033 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
ABCA4-205ENST00000472033 ANO8Q9HCE9 1232 aaPredicted RBP12.55□□□□□ -0.4
ABCA4-205ENST00000472033 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
ABCA4-205ENST00000472033 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
ABCA4-205ENST00000472033 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
ABCA4-205ENST00000472033 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
ABCA4-205ENST00000472033 PDIA6Q15084 440 aa12.52□□□□□ -0.41
ABCA4-205ENST00000472033 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
ABCA4-205ENST00000472033 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
ABCA4-205ENST00000472033 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
ABCA4-205ENST00000472033 ZNF687Q8N1G0 1237 aa12.5□□□□□ -0.41
ABCA4-205ENST00000472033 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
ABCA4-205ENST00000472033 PCDH10Q9P2E7 1040 aa12.5□□□□□ -0.41
ABCA4-205ENST00000472033 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
ABCA4-205ENST00000472033 FOSBP53539 338 aa12.47□□□□□ -0.41
ABCA4-205ENST00000472033 BICRAQ9NZM4 1560 aa12.45□□□□□ -0.42
ABCA4-205ENST00000472033 DDX12PQ92771 950 aa12.44□□□□□ -0.42
ABCA4-205ENST00000472033 PTGER2P43116 358 aa12.43□□□□□ -0.42
ABCA4-205ENST00000472033 PHF14O94880 888 aa12.42□□□□□ -0.42
ABCA4-205ENST00000472033 KRTAP3-3Q9BYR6 98 aa12.42□□□□□ -0.42
ABCA4-205ENST00000472033 KRTAP3-2Q9BYR7 98 aa12.42□□□□□ -0.42
ABCA4-205ENST00000472033 PCDHGA10Q9Y5H3 936 aa12.42□□□□□ -0.42
ABCA4-205ENST00000472033 PBX2P40425 430 aa12.41□□□□□ -0.42
ABCA4-205ENST00000472033 ZDHHC16Q969W1 377 aa12.41□□□□□ -0.42
ABCA4-205ENST00000472033 TYW1BQ6NUM6 668 aa12.39□□□□□ -0.43
ABCA4-205ENST00000472033 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
ABCA4-205ENST00000472033 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
ABCA4-205ENST00000472033 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
ABCA4-205ENST00000472033 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
ABCA4-205ENST00000472033 EPAS1Q99814 870 aa12.38□□□□□ -0.43
ABCA4-205ENST00000472033 GRXCR2A6NFK2 248 aa12.37□□□□□ -0.43
ABCA4-205ENST00000472033 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms