RNA–Protein interactions for RNA: ENST00000471958.1

PARD3B-208, Transcript of par-3 family cell polarity regulator beta, human

TSL 3

Gene PARD3B, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PARD3B-208	ENST00000471958	ADGRL1	O94910	1474 aa		33.76	■■■■□ 3
PARD3B-208	ENST00000471958	CDC42BPB	Q9Y5S2	1711 aa		33.76	■■■■□ 3
PARD3B-208	ENST00000471958	CCNB3	Q8WWL7	1395 aa		33.76	■■■■□ 3
PARD3B-208	ENST00000471958	LRRC9	Q6ZRR7	1453 aa		33.76	■■■□□ 2.99
PARD3B-208	ENST00000471958	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.75	■■■□□ 2.99
PARD3B-208	ENST00000471958	RAPGEF3	O95398	923 aa		33.75	■■■□□ 2.99
PARD3B-208	ENST00000471958	CDC42BPA	Q5VT25	1732 aa		33.74	■■■□□ 2.99
PARD3B-208	ENST00000471958	SCAPER	Q9BY12	1400 aa		33.72	■■■□□ 2.99
PARD3B-208	ENST00000471958	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.71	■■■□□ 2.99
PARD3B-208	ENST00000471958	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.67	■■■□□ 2.98
PARD3B-208	ENST00000471958	NCOA2	Q15596	1464 aa		33.67	■■■□□ 2.98
PARD3B-208	ENST00000471958	FRMPD1	Q5SYB0	1578 aa		33.67	■■■□□ 2.98
PARD3B-208	ENST00000471958	RICTOR	Q6R327	1708 aa		33.66	■■■□□ 2.98
PARD3B-208	ENST00000471958	POGZ	Q7Z3K3	1410 aa		33.65	■■■□□ 2.98
PARD3B-208	ENST00000471958	KANK4	Q5T7N3	995 aa	Predicted RBP	33.65	■■■□□ 2.98
PARD3B-208	ENST00000471958	ITSN2	Q9NZM3	1697 aa		33.62	■■■□□ 2.97
PARD3B-208	ENST00000471958	ZMYM4	Q5VZL5	1548 aa		33.6	■■■□□ 2.97
PARD3B-208	ENST00000471958	ABCC1	P33527	1531 aa		33.59	■■■□□ 2.97
PARD3B-208	ENST00000471958	ZNF518A	Q6AHZ1	1483 aa		33.59	■■■□□ 2.97
PARD3B-208	ENST00000471958	MAGI2	Q86UL8	1455 aa		33.59	■■■□□ 2.97
PARD3B-208	ENST00000471958	PLEKHH2	Q8IVE3	1493 aa		33.58	■■■□□ 2.97
PARD3B-208	ENST00000471958	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.58	■■■□□ 2.97
PARD3B-208	ENST00000471958	KIAA1107	Q9UPP5	1409 aa		33.55	■■■□□ 2.96
PARD3B-208	ENST00000471958	SAMD9L	Q8IVG5	1584 aa		33.54	■■■□□ 2.96
PARD3B-208	ENST00000471958	AFAP1	Q8N556	730 aa		33.51	■■■□□ 2.95
PARD3B-208	ENST00000471958	ARHGEF12	Q9NZN5	1544 aa		33.51	■■■□□ 2.95
PARD3B-208	ENST00000471958	KDM5C	P41229	1560 aa		33.5	■■■□□ 2.95
PARD3B-208	ENST00000471958	ARHGEF40	Q8TER5	1519 aa		33.48	■■■□□ 2.95
PARD3B-208	ENST00000471958	TRAPPC8	Q9Y2L5	1435 aa		33.47	■■■□□ 2.95
PARD3B-208	ENST00000471958	ZFYVE16	Q7Z3T8	1539 aa		33.47	■■■□□ 2.95
PARD3B-208	ENST00000471958	SYCP2	Q9BX26	1530 aa		33.45	■■■□□ 2.95
PARD3B-208	ENST00000471958	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.44	■■■□□ 2.94
PARD3B-208	ENST00000471958	MYOM3	Q5VTT5	1437 aa		33.44	■■■□□ 2.94
PARD3B-208	ENST00000471958	MLH3	Q9UHC1	1453 aa		33.43	■■■□□ 2.94
PARD3B-208	ENST00000471958	MIA2	Q96PC5	1412 aa		33.42	■■■□□ 2.94
PARD3B-208	ENST00000471958	ZNF644	Q9H582	1327 aa	Predicted RBP	33.41	■■■□□ 2.94
PARD3B-208	ENST00000471958	YEATS2	Q9ULM3	1422 aa		33.4	■■■□□ 2.94
PARD3B-208	ENST00000471958	HECW2	Q9P2P5	1572 aa		33.39	■■■□□ 2.94
PARD3B-208	ENST00000471958	RSPH4A	Q5TD94	716 aa		33.39	■■■□□ 2.94
PARD3B-208	ENST00000471958	MYT1L	Q9UL68	1186 aa		33.37	■■■□□ 2.93
PARD3B-208	ENST00000471958	ATP10A	O60312	1499 aa		33.37	■■■□□ 2.93
PARD3B-208	ENST00000471958	CAMSAP2	Q08AD1	1489 aa		33.37	■■■□□ 2.93
PARD3B-208	ENST00000471958	MBD5	Q9P267	1494 aa		33.37	■■■□□ 2.93
PARD3B-208	ENST00000471958	KDM4F	A0A1W2PPD8	638 aa		33.34	■■■□□ 2.93
PARD3B-208	ENST00000471958	SPAG9	O60271	1321 aa	Known RBP	33.33	■■■□□ 2.93
PARD3B-208	ENST00000471958	C9orf84	Q5VXU9	1444 aa		33.31	■■■□□ 2.92
PARD3B-208	ENST00000471958	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.29	■■■□□ 2.92
PARD3B-208	ENST00000471958	KIDINS220	Q9ULH0	1771 aa		33.26	■■■□□ 2.92
PARD3B-208	ENST00000471958	ARHGEF5	Q12774	1597 aa		33.26	■■■□□ 2.92
PARD3B-208	ENST00000471958	CCDC141	Q6ZP82	1450 aa		33.26	■■■□□ 2.92
PARD3B-208	ENST00000471958	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.26	■■■□□ 2.91
PARD3B-208	ENST00000471958	DIP2C	Q9Y2E4	1556 aa		33.26	■■■□□ 2.91
PARD3B-208	ENST00000471958	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.24	■■■□□ 2.91
PARD3B-208	ENST00000471958	RERE	Q9P2R6	1566 aa		33.24	■■■□□ 2.91
PARD3B-208	ENST00000471958	ATP7A	Q04656	1500 aa		33.23	■■■□□ 2.91
PARD3B-208	ENST00000471958	FGD6	Q6ZV73	1430 aa		33.23	■■■□□ 2.91
PARD3B-208	ENST00000471958	ABCA6	Q8N139	1617 aa		33.22	■■■□□ 2.91
PARD3B-208	ENST00000471958	INO80	Q9ULG1	1556 aa	Predicted RBP	33.21	■■■□□ 2.91
PARD3B-208	ENST00000471958	TSPY4	P0CV99	314 aa		33.2	■■■□□ 2.91
PARD3B-208	ENST00000471958	TSPY10	P0CW01	314 aa		33.2	■■■□□ 2.91
PARD3B-208	ENST00000471958	PTPN23	Q9H3S7	1636 aa		33.19	■■■□□ 2.9
PARD3B-208	ENST00000471958	BCORL1	Q5H9F3	1711 aa		33.18	■■■□□ 2.9
PARD3B-208	ENST00000471958	TCOF1	Q13428	1488 aa	Known RBP	33.17	■■■□□ 2.9
PARD3B-208	ENST00000471958	ADAMTSL3	P82987	1691 aa		33.13	■■■□□ 2.89
PARD3B-208	ENST00000471958	AGL	P35573	1532 aa		33.13	■■■□□ 2.89
PARD3B-208	ENST00000471958	SIGLEC1	Q9BZZ2	1709 aa		33.13	■■■□□ 2.89
PARD3B-208	ENST00000471958	A2M	P01023	1474 aa		33.08	■■■□□ 2.89
PARD3B-208	ENST00000471958	MAST1	Q9Y2H9	1570 aa		33.08	■■■□□ 2.89
PARD3B-208	ENST00000471958	ADGB	Q8N7X0	1667 aa		33.07	■■■□□ 2.89
PARD3B-208	ENST00000471958	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.04	■■■□□ 2.88
PARD3B-208	ENST00000471958	MLEC	Q14165	292 aa		33.03	■■■□□ 2.88
PARD3B-208	ENST00000471958	SHANK2	Q9UPX8	1470 aa		33.03	■■■□□ 2.88
PARD3B-208	ENST00000471958	PLXNC1	O60486	1568 aa		33.03	■■■□□ 2.88
PARD3B-208	ENST00000471958	ABCC5	O15440	1437 aa		33.02	■■■□□ 2.88
PARD3B-208	ENST00000471958	DHX29	Q7Z478	1369 aa	Known RBP	33.02	■■■□□ 2.88
PARD3B-208	ENST00000471958	DNMT1	P26358	1616 aa	Known RBP	33.01	■■■□□ 2.87
PARD3B-208	ENST00000471958	DAPK1	P53355	1430 aa		33.01	■■■□□ 2.87
PARD3B-208	ENST00000471958	MADD	Q8WXG6	1647 aa		33	■■■□□ 2.87
PARD3B-208	ENST00000471958	FAM50A	Q14320	339 aa	Known RBP	33	■■■□□ 2.87
PARD3B-208	ENST00000471958	PTPRM	P28827	1452 aa		32.96	■■■□□ 2.87
PARD3B-208	ENST00000471958	CROCC2	H7BZ55	1655 aa		32.96	■■■□□ 2.87
PARD3B-208	ENST00000471958	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.94	■■■□□ 2.86
PARD3B-208	ENST00000471958	FER1L4	A9Z1Z3	1794 aa		32.92	■■■□□ 2.86
PARD3B-208	ENST00000471958	PPP6R1	Q9UPN7	881 aa		32.91	■■■□□ 2.86
PARD3B-208	ENST00000471958	RIMS1	Q86UR5	1692 aa	Known RBP	32.9	■■■□□ 2.86
PARD3B-208	ENST00000471958	ESF1	Q9H501	851 aa	Known RBP	32.89	■■■□□ 2.86
PARD3B-208	ENST00000471958	ANKRD30A	Q9BXX3	1397 aa		32.86	■■■□□ 2.85
PARD3B-208	ENST00000471958	CNTLN	Q9NXG0	1405 aa		32.85	■■■□□ 2.85
PARD3B-208	ENST00000471958	DUOX2	Q9NRD8	1548 aa		32.85	■■■□□ 2.85
PARD3B-208	ENST00000471958	KIF3B	O15066	747 aa		32.84	■■■□□ 2.85
PARD3B-208	ENST00000471958	RRBP1	Q9P2E9	1410 aa	Known RBP	32.84	■■■□□ 2.85
PARD3B-208	ENST00000471958	KIF15	Q9NS87	1388 aa		32.83	■■■□□ 2.85
PARD3B-208	ENST00000471958	GGT6	Q6P531	493 aa		32.83	■■■□□ 2.85
PARD3B-208	ENST00000471958	ADGRL2	O95490	1459 aa		32.81	■■■□□ 2.84
PARD3B-208	ENST00000471958	NCOA1	Q15788	1441 aa		32.81	■■■□□ 2.84
PARD3B-208	ENST00000471958	CHIC2	Q9UKJ5	165 aa		32.81	■■■□□ 2.84
PARD3B-208	ENST00000471958	RRP7BP	Q9NSQ0	103 aa		32.8	■■■□□ 2.84
PARD3B-208	ENST00000471958	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.78	■■■□□ 2.84
PARD3B-208	ENST00000471958	ERBIN	Q96RT1	1412 aa		32.77	■■■□□ 2.84
PARD3B-208	ENST00000471958	FAM135A	Q9P2D6	1515 aa		32.75	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms