RNA–Protein interactions for RNA: ENST00000471824.6

PDE6B-207, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-207ENST00000471824 HECW1Q76N89 1606 aa15.27■□□□□ 0.03
PDE6B-207ENST00000471824 PCF11O94913 1555 aaKnown RBP15.27■□□□□ 0.03
PDE6B-207ENST00000471824 LMTK3Q96Q04 1460 aa15.26■□□□□ 0.03
PDE6B-207ENST00000471824 TROQ12816 1431 aaPredicted RBP15.25■□□□□ 0.03
PDE6B-207ENST00000471824 FBXO41Q8TF61 875 aa15.23■□□□□ 0.03
PDE6B-207ENST00000471824 CLIP1P30622 1438 aa15.23■□□□□ 0.03
PDE6B-207ENST00000471824 ATP10AO60312 1499 aa15.22■□□□□ 0.03
PDE6B-207ENST00000471824 ZNF518AQ6AHZ1 1483 aa15.2■□□□□ 0.02
PDE6B-207ENST00000471824 C9orf84Q5VXU9 1444 aa15.2■□□□□ 0.02
PDE6B-207ENST00000471824 KIF14Q15058 1648 aa15.2■□□□□ 0.02
PDE6B-207ENST00000471824 MLECQ14165 292 aa15.19■□□□□ 0.02
PDE6B-207ENST00000471824 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
PDE6B-207ENST00000471824 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
PDE6B-207ENST00000471824 AFAP1Q8N556 730 aa15.17■□□□□ 0.02
PDE6B-207ENST00000471824 ARHGEF12Q9NZN5 1544 aa15.17■□□□□ 0.02
PDE6B-207ENST00000471824 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
PDE6B-207ENST00000471824 HSPA2P54652 639 aa15.16■□□□□ 0.02
PDE6B-207ENST00000471824 SIGLEC1Q9BZZ2 1709 aa15.16■□□□□ 0.02
PDE6B-207ENST00000471824 CCDC18Q5T9S5 1454 aa15.15■□□□□ 0.02
PDE6B-207ENST00000471824 MYO5CQ9NQX4 1742 aa15.15■□□□□ 0.02
PDE6B-207ENST00000471824 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
PDE6B-207ENST00000471824 KDM5CP41229 1560 aa15.15■□□□□ 0.02
PDE6B-207ENST00000471824 MLH3Q9UHC1 1453 aa15.13■□□□□ 0.01
PDE6B-207ENST00000471824 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
PDE6B-207ENST00000471824 REREQ9P2R6 1566 aa15.1■□□□□ 0.01
PDE6B-207ENST00000471824 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
PDE6B-207ENST00000471824 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
PDE6B-207ENST00000471824 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0.01
PDE6B-207ENST00000471824 CEBPAP49715 358 aaPredicted RBP15.08■□□□□ 0
PDE6B-207ENST00000471824 ABCC1P33527 1531 aa15.07■□□□□ 0
PDE6B-207ENST00000471824 DIP2CQ9Y2E4 1556 aa15.07■□□□□ 0
PDE6B-207ENST00000471824 AGLP35573 1532 aa15.06■□□□□ 0
PDE6B-207ENST00000471824 PREX2Q70Z35 1606 aa15.06■□□□□ 0
PDE6B-207ENST00000471824 LRRIQ1Q96JM4 1722 aa15.06■□□□□ 0
PDE6B-207ENST00000471824 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
PDE6B-207ENST00000471824 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
PDE6B-207ENST00000471824 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
PDE6B-207ENST00000471824 CERKQ8TCT0 537 aa15.04■□□□□ -0
PDE6B-207ENST00000471824 ESF1Q9H501 851 aaKnown RBP15.04■□□□□ -0
PDE6B-207ENST00000471824 ABCA6Q8N139 1617 aa15.03■□□□□ -0
PDE6B-207ENST00000471824 GPATCH8Q9UKJ3 1502 aaKnown RBP15.02□□□□□ -0.01
PDE6B-207ENST00000471824 PREX1Q8TCU6 1659 aa15.01□□□□□ -0.01
PDE6B-207ENST00000471824 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
PDE6B-207ENST00000471824 ZNF777Q9ULD5 760 aaPredicted RBP15□□□□□ -0.01
PDE6B-207ENST00000471824 KIAA1107Q9UPP5 1409 aa15□□□□□ -0.01
PDE6B-207ENST00000471824 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
PDE6B-207ENST00000471824 ITSN2Q9NZM3 1697 aa14.99□□□□□ -0.01
PDE6B-207ENST00000471824 PLEKHH2Q8IVE3 1493 aa14.98□□□□□ -0.01
PDE6B-207ENST00000471824 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
PDE6B-207ENST00000471824 SAMD9LQ8IVG5 1584 aa14.98□□□□□ -0.01
PDE6B-207ENST00000471824 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDE6B-207ENST00000471824 CCNB3Q8WWL7 1395 aa14.97□□□□□ -0.01
PDE6B-207ENST00000471824 KIDINS220Q9ULH0 1771 aa14.96□□□□□ -0.01
PDE6B-207ENST00000471824 CDC42BPAQ5VT25 1732 aa14.96□□□□□ -0.01
PDE6B-207ENST00000471824 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.02
PDE6B-207ENST00000471824 MTUS2Q5JR59 1369 aa14.96□□□□□ -0.02
PDE6B-207ENST00000471824 PTPRTO14522 1441 aa14.94□□□□□ -0.02
PDE6B-207ENST00000471824 NPATQ14207 1427 aa14.94□□□□□ -0.02
PDE6B-207ENST00000471824 ZMYM3Q14202 1370 aa14.92□□□□□ -0.02
PDE6B-207ENST00000471824 C3P01024 1663 aa14.92□□□□□ -0.02
PDE6B-207ENST00000471824 ATP7AQ04656 1500 aa14.92□□□□□ -0.02
PDE6B-207ENST00000471824 PPP6R1Q9UPN7 881 aa14.91□□□□□ -0.02
PDE6B-207ENST00000471824 SETD1BQ9UPS6 1966 aaKnown RBP14.91□□□□□ -0.02
PDE6B-207ENST00000471824 A2MP01023 1474 aa14.9□□□□□ -0.02
PDE6B-207ENST00000471824 STRCQ7RTU9 1775 aa14.9□□□□□ -0.02
PDE6B-207ENST00000471824 NCOA1Q15788 1441 aa14.9□□□□□ -0.02
PDE6B-207ENST00000471824 PLXNC1O60486 1568 aa14.89□□□□□ -0.03
PDE6B-207ENST00000471824 INO80Q9ULG1 1556 aaPredicted RBP14.89□□□□□ -0.03
PDE6B-207ENST00000471824 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
PDE6B-207ENST00000471824 MBD5Q9P267 1494 aa14.88□□□□□ -0.03
PDE6B-207ENST00000471824 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
PDE6B-207ENST00000471824 ZNF644Q9H582 1327 aaPredicted RBP14.87□□□□□ -0.03
PDE6B-207ENST00000471824 MROH2AA6NES4 1674 aa14.87□□□□□ -0.03
PDE6B-207ENST00000471824 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
PDE6B-207ENST00000471824 GGT6Q6P531 493 aa14.86□□□□□ -0.03
PDE6B-207ENST00000471824 TIAM1Q13009 1591 aa14.84□□□□□ -0.03
PDE6B-207ENST00000471824 PTPRKQ15262 1439 aa14.83□□□□□ -0.03
PDE6B-207ENST00000471824 RSPH4AQ5TD94 716 aa14.83□□□□□ -0.04
PDE6B-207ENST00000471824 DHX29Q7Z478 1369 aaKnown RBP14.83□□□□□ -0.04
PDE6B-207ENST00000471824 CAMSAP1Q5T5Y3 1602 aa14.82□□□□□ -0.04
PDE6B-207ENST00000471824 PKD2Q13563 968 aa14.82□□□□□ -0.04
PDE6B-207ENST00000471824 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
PDE6B-207ENST00000471824 IQSEC2Q5JU85 1478 aa14.82□□□□□ -0.04
PDE6B-207ENST00000471824 LTBP4Q8N2S1 1624 aa14.81□□□□□ -0.04
PDE6B-207ENST00000471824 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
PDE6B-207ENST00000471824 NCOA2Q15596 1464 aa14.79□□□□□ -0.04
PDE6B-207ENST00000471824 CCDC141Q6ZP82 1450 aa14.79□□□□□ -0.04
PDE6B-207ENST00000471824 NCKAP5LQ9HCH0 1330 aa14.79□□□□□ -0.04
PDE6B-207ENST00000471824 ADGBQ8N7X0 1667 aa14.78□□□□□ -0.04
PDE6B-207ENST00000471824 TCOF1Q13428 1488 aaKnown RBP14.78□□□□□ -0.04
PDE6B-207ENST00000471824 CLTCQ00610 1675 aaKnown RBP14.77□□□□□ -0.04
PDE6B-207ENST00000471824 CEP170BQ9Y4F5 1589 aaPredicted RBP14.77□□□□□ -0.04
PDE6B-207ENST00000471824 KIF3BO15066 747 aa14.76□□□□□ -0.05
PDE6B-207ENST00000471824 MYO3AQ8NEV4 1616 aa14.76□□□□□ -0.05
PDE6B-207ENST00000471824 FAM135AQ9P2D6 1515 aa14.76□□□□□ -0.05
PDE6B-207ENST00000471824 CAMSAP2Q08AD1 1489 aa14.76□□□□□ -0.05
PDE6B-207ENST00000471824 ZNF142P52746 1687 aaPredicted RBP14.75□□□□□ -0.05
PDE6B-207ENST00000471824 A2ML1A8K2U0 1454 aa14.75□□□□□ -0.05
PDE6B-207ENST00000471824 ZNF335Q9H4Z2 1342 aaPredicted RBP14.74□□□□□ -0.05
PDE6B-207ENST00000471824 TSPY4P0CV99 314 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms